RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
RN7SL28P-201ENST00000488836 RGS12O14924 1447 aa12.82□□□□□ -0.36
RN7SL28P-201ENST00000488836 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
RN7SL28P-201ENST00000488836 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
RN7SL28P-201ENST00000488836 USP21Q9UK80 565 aa12.81□□□□□ -0.36
RN7SL28P-201ENST00000488836 PPLO60437 1756 aa12.81□□□□□ -0.36
RN7SL28P-201ENST00000488836 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
RN7SL28P-201ENST00000488836 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
RN7SL28P-201ENST00000488836 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
RN7SL28P-201ENST00000488836 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
RN7SL28P-201ENST00000488836 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
RN7SL28P-201ENST00000488836 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
RN7SL28P-201ENST00000488836 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
RN7SL28P-201ENST00000488836 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
RN7SL28P-201ENST00000488836 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
RN7SL28P-201ENST00000488836 ACIN1Q9UKV3 1341 aaKnown RBP12.77□□□□□ -0.37
RN7SL28P-201ENST00000488836 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
RN7SL28P-201ENST00000488836 TECPR2O15040 1411 aa12.75□□□□□ -0.37
RN7SL28P-201ENST00000488836 MYOM2P54296 1465 aa12.75□□□□□ -0.37
RN7SL28P-201ENST00000488836 CCDC125Q86Z20 511 aa12.75□□□□□ -0.37
RN7SL28P-201ENST00000488836 ATRNO75882 1429 aa12.74□□□□□ -0.37
RN7SL28P-201ENST00000488836 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
RN7SL28P-201ENST00000488836 PXDNQ92626 1479 aa12.73□□□□□ -0.37
RN7SL28P-201ENST00000488836 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
RN7SL28P-201ENST00000488836 FOXO3O43524 673 aa12.73□□□□□ -0.37
RN7SL28P-201ENST00000488836 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
RN7SL28P-201ENST00000488836 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
RN7SL28P-201ENST00000488836 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
RN7SL28P-201ENST00000488836 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 RGL3Q3MIN7 710 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 STK26Q9P289 416 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 EP400Q96L91 3159 aa12.71□□□□□ -0.37
RN7SL28P-201ENST00000488836 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
RN7SL28P-201ENST00000488836 IFT172Q9UG01 1749 aa12.71□□□□□ -0.38
RN7SL28P-201ENST00000488836 SIRT1Q96EB6 747 aa12.7□□□□□ -0.38
RN7SL28P-201ENST00000488836 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
RN7SL28P-201ENST00000488836 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
RN7SL28P-201ENST00000488836 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.7□□□□□ -0.38
RN7SL28P-201ENST00000488836 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
RN7SL28P-201ENST00000488836 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
RN7SL28P-201ENST00000488836 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
RN7SL28P-201ENST00000488836 MPHOSPH9Q99550 1183 aa12.69□□□□□ -0.38
RN7SL28P-201ENST00000488836 YTHDC2Q9H6S0 1430 aaKnown RBP12.69□□□□□ -0.38
RN7SL28P-201ENST00000488836 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
RN7SL28P-201ENST00000488836 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
RN7SL28P-201ENST00000488836 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
RN7SL28P-201ENST00000488836 PSME1Q06323 249 aa12.68□□□□□ -0.38
RN7SL28P-201ENST00000488836 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
RN7SL28P-201ENST00000488836 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
RN7SL28P-201ENST00000488836 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
RN7SL28P-201ENST00000488836 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
RN7SL28P-201ENST00000488836 KRT28Q7Z3Y7 464 aa12.66□□□□□ -0.38
RN7SL28P-201ENST00000488836 SLIT2O94813 1529 aa12.66□□□□□ -0.38
RN7SL28P-201ENST00000488836 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
RN7SL28P-201ENST00000488836 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
RN7SL28P-201ENST00000488836 USP32Q8NFA0 1604 aa12.65□□□□□ -0.38
RN7SL28P-201ENST00000488836 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
RN7SL28P-201ENST00000488836 TNS3Q68CZ2 1445 aa12.64□□□□□ -0.39
RN7SL28P-201ENST00000488836 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
RN7SL28P-201ENST00000488836 RALGAPBQ86X10 1494 aa12.64□□□□□ -0.39
RN7SL28P-201ENST00000488836 BLMP54132 1417 aaPredicted RBP12.63□□□□□ -0.39
RN7SL28P-201ENST00000488836 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
RN7SL28P-201ENST00000488836 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
RN7SL28P-201ENST00000488836 GLI3P10071 1580 aa12.62□□□□□ -0.39
RN7SL28P-201ENST00000488836 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
RN7SL28P-201ENST00000488836 VPS72Q15906 364 aa12.62□□□□□ -0.39
RN7SL28P-201ENST00000488836 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
RN7SL28P-201ENST00000488836 EIF3AQ14152 1382 aaKnown RBP12.61□□□□□ -0.39
RN7SL28P-201ENST00000488836 POGKQ9P215 609 aa12.61□□□□□ -0.39
RN7SL28P-201ENST00000488836 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
RN7SL28P-201ENST00000488836 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
RN7SL28P-201ENST00000488836 PRAM1Q96QH2 718 aa12.6□□□□□ -0.39
RN7SL28P-201ENST00000488836 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
RN7SL28P-201ENST00000488836 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
RN7SL28P-201ENST00000488836 RGPD8O14715 1765 aaPredicted RBP12.59□□□□□ -0.39
RN7SL28P-201ENST00000488836 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
RN7SL28P-201ENST00000488836 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
RN7SL28P-201ENST00000488836 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
RN7SL28P-201ENST00000488836 ADGRB2O60241 1585 aa12.58□□□□□ -0.4
RN7SL28P-201ENST00000488836 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
RN7SL28P-201ENST00000488836 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
RN7SL28P-201ENST00000488836 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
RN7SL28P-201ENST00000488836 GPRASP1Q5JY77 1395 aa12.57□□□□□ -0.4
RN7SL28P-201ENST00000488836 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
RN7SL28P-201ENST00000488836 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
RN7SL28P-201ENST00000488836 BRWD3Q6RI45 1802 aa12.56□□□□□ -0.4
RN7SL28P-201ENST00000488836 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
RN7SL28P-201ENST00000488836 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
RN7SL28P-201ENST00000488836 A0A0G2JS52 829 aa12.55□□□□□ -0.4
RN7SL28P-201ENST00000488836 MYT1Q01538 1121 aa12.55□□□□□ -0.4
RN7SL28P-201ENST00000488836 BAG6P46379 1132 aa12.54□□□□□ -0.4
RN7SL28P-201ENST00000488836 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
RN7SL28P-201ENST00000488836 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
RN7SL28P-201ENST00000488836 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
RN7SL28P-201ENST00000488836 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
RN7SL28P-201ENST00000488836 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
RN7SL28P-201ENST00000488836 ADGRB1O14514 1584 aa12.52□□□□□ -0.4
RN7SL28P-201ENST00000488836 TRPM3Q9HCF6 1732 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms