RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 MST1RQ04912 1400 aa18.49■□□□□ 0.55
PHF1-210ENST00000488767 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
PHF1-210ENST00000488767 KIAA1210Q9ULL0 1709 aa18.47■□□□□ 0.55
PHF1-210ENST00000488767 BRINP3Q76B58 766 aa18.46■□□□□ 0.55
PHF1-210ENST00000488767 PLEKHH1Q9ULM0 1364 aa18.45■□□□□ 0.54
PHF1-210ENST00000488767 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
PHF1-210ENST00000488767 C1orf167Q5SNV9 1468 aa18.45■□□□□ 0.54
PHF1-210ENST00000488767 PHLPP1O60346 1717 aa18.43■□□□□ 0.54
PHF1-210ENST00000488767 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
PHF1-210ENST00000488767 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
PHF1-210ENST00000488767 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
PHF1-210ENST00000488767 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
PHF1-210ENST00000488767 NBPF1Q3BBV0 1214 aa18.39■□□□□ 0.53
PHF1-210ENST00000488767 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
PHF1-210ENST00000488767 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
PHF1-210ENST00000488767 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
PHF1-210ENST00000488767 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
PHF1-210ENST00000488767 JCADQ9P266 1359 aa18.38■□□□□ 0.53
PHF1-210ENST00000488767 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
PHF1-210ENST00000488767 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
PHF1-210ENST00000488767 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
PHF1-210ENST00000488767 LRRC59Q96AG4 307 aaKnown RBP18.36■□□□□ 0.53
PHF1-210ENST00000488767 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
PHF1-210ENST00000488767 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
PHF1-210ENST00000488767 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
PHF1-210ENST00000488767 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
PHF1-210ENST00000488767 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
PHF1-210ENST00000488767 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
PHF1-210ENST00000488767 ANKARQ7Z5J8 1434 aa18.34■□□□□ 0.53
PHF1-210ENST00000488767 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
PHF1-210ENST00000488767 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
PHF1-210ENST00000488767 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
PHF1-210ENST00000488767 WASLO00401 505 aaPredicted RBP18.33■□□□□ 0.52
PHF1-210ENST00000488767 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
PHF1-210ENST00000488767 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
PHF1-210ENST00000488767 SPATA31A6Q5VVP1 1343 aa18.31■□□□□ 0.52
PHF1-210ENST00000488767 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
PHF1-210ENST00000488767 FOXO3O43524 673 aa18.3■□□□□ 0.52
PHF1-210ENST00000488767 NBPF8Q3BBV2 869 aa18.3■□□□□ 0.52
PHF1-210ENST00000488767 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
PHF1-210ENST00000488767 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
PHF1-210ENST00000488767 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
PHF1-210ENST00000488767 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
PHF1-210ENST00000488767 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
PHF1-210ENST00000488767 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
PHF1-210ENST00000488767 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
PHF1-210ENST00000488767 PSME1Q06323 249 aa18.27■□□□□ 0.52
PHF1-210ENST00000488767 SHPRHQ149N8 1683 aa18.27■□□□□ 0.52
PHF1-210ENST00000488767 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
PHF1-210ENST00000488767 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
PHF1-210ENST00000488767 EVC2Q86UK5 1308 aa18.24■□□□□ 0.51
PHF1-210ENST00000488767 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
PHF1-210ENST00000488767 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
PHF1-210ENST00000488767 QRICH2Q9H0J4 1663 aa18.24■□□□□ 0.51
PHF1-210ENST00000488767 PXDNQ92626 1479 aa18.23■□□□□ 0.51
PHF1-210ENST00000488767 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
PHF1-210ENST00000488767 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
PHF1-210ENST00000488767 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
PHF1-210ENST00000488767 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
PHF1-210ENST00000488767 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
PHF1-210ENST00000488767 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
PHF1-210ENST00000488767 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
PHF1-210ENST00000488767 ITSN1Q15811 1721 aa18.21■□□□□ 0.51
PHF1-210ENST00000488767 USP32Q8NFA0 1604 aa18.21■□□□□ 0.51
PHF1-210ENST00000488767 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
PHF1-210ENST00000488767 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
PHF1-210ENST00000488767 ATP7BP35670 1465 aa18.2■□□□□ 0.5
PHF1-210ENST00000488767 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
PHF1-210ENST00000488767 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
PHF1-210ENST00000488767 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
PHF1-210ENST00000488767 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
PHF1-210ENST00000488767 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
PHF1-210ENST00000488767 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
PHF1-210ENST00000488767 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
PHF1-210ENST00000488767 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
PHF1-210ENST00000488767 HAP1P54257 671 aaPredicted RBP18.17■□□□□ 0.5
PHF1-210ENST00000488767 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
PHF1-210ENST00000488767 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
PHF1-210ENST00000488767 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
PHF1-210ENST00000488767 LRP6O75581 1613 aa18.15■□□□□ 0.5
PHF1-210ENST00000488767 PLEKHG3A1L390 1219 aa18.14■□□□□ 0.49
PHF1-210ENST00000488767 ATAD2Q6PL18 1390 aa18.14■□□□□ 0.49
PHF1-210ENST00000488767 COL22A1Q8NFW1 1626 aaPredicted RBP18.13■□□□□ 0.49
PHF1-210ENST00000488767 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
PHF1-210ENST00000488767 ZNF772Q68DY9 489 aaPredicted RBP18.13■□□□□ 0.49
PHF1-210ENST00000488767 ACEP12821 1306 aa18.13■□□□□ 0.49
PHF1-210ENST00000488767 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
PHF1-210ENST00000488767 C8orf37Q96NL8 207 aa18.12■□□□□ 0.49
PHF1-210ENST00000488767 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
PHF1-210ENST00000488767 USP47Q96K76 1375 aa18.12■□□□□ 0.49
PHF1-210ENST00000488767 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
PHF1-210ENST00000488767 NGLY1Q96IV0 654 aa18.1■□□□□ 0.49
PHF1-210ENST00000488767 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
PHF1-210ENST00000488767 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
PHF1-210ENST00000488767 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
PHF1-210ENST00000488767 AFF2P51816 1311 aa18.07■□□□□ 0.48
PHF1-210ENST00000488767 TMF1P82094 1093 aa18.07■□□□□ 0.48
PHF1-210ENST00000488767 CDCA8Q53HL2 280 aa18.06■□□□□ 0.48
PHF1-210ENST00000488767 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
PHF1-210ENST00000488767 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms