RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
ZEB1-206ENST00000488625 KIAA1211Q6ZU35 1233 aa12.19□□□□□ -0.46
ZEB1-206ENST00000488625 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
ZEB1-206ENST00000488625 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
ZEB1-206ENST00000488625 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
ZEB1-206ENST00000488625 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 MEX3CQ5U5Q3 659 aaKnown RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 SLC12A5Q9H2X9 1139 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
ZEB1-206ENST00000488625 HMOX1P09601 288 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
ZEB1-206ENST00000488625 ATF3P18847 181 aa12.17□□□□□ -0.46
ZEB1-206ENST00000488625 DDX49Q9Y6V7 483 aaKnown RBP12.17□□□□□ -0.46
ZEB1-206ENST00000488625 ATP10BO94823 1461 aa12.17□□□□□ -0.46
ZEB1-206ENST00000488625 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
ZEB1-206ENST00000488625 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
ZEB1-206ENST00000488625 DUSP27Q5VZP5 1158 aa12.17□□□□□ -0.46
ZEB1-206ENST00000488625 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
ZEB1-206ENST00000488625 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
ZEB1-206ENST00000488625 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
ZEB1-206ENST00000488625 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
ZEB1-206ENST00000488625 DISP1Q96F81 1524 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 GNAI1P63096 354 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 FGD1P98174 961 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-206ENST00000488625 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
ZEB1-206ENST00000488625 ADGRL2O95490 1459 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
ZEB1-206ENST00000488625 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-206ENST00000488625 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.47
ZEB1-206ENST00000488625 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
ZEB1-206ENST00000488625 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
ZEB1-206ENST00000488625 RILPL2Q969X0 211 aa12.14□□□□□ -0.47
ZEB1-206ENST00000488625 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
ZEB1-206ENST00000488625 AMPHP49418 695 aa12.14□□□□□ -0.47
ZEB1-206ENST00000488625 GOLGA6L6A8MZA4 724 aa12.13□□□□□ -0.47
ZEB1-206ENST00000488625 NUP160Q12769 1436 aa12.13□□□□□ -0.47
ZEB1-206ENST00000488625 CDC45O75419 566 aa12.13□□□□□ -0.47
ZEB1-206ENST00000488625 KDM5CP41229 1560 aa12.12□□□□□ -0.47
ZEB1-206ENST00000488625 C1orf115Q9H7X2 142 aa12.12□□□□□ -0.47
ZEB1-206ENST00000488625 TRAK2O60296 914 aa12.12□□□□□ -0.47
ZEB1-206ENST00000488625 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
ZEB1-206ENST00000488625 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
ZEB1-206ENST00000488625 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
ZEB1-206ENST00000488625 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
ZEB1-206ENST00000488625 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
ZEB1-206ENST00000488625 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
ZEB1-206ENST00000488625 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
ZEB1-206ENST00000488625 PHF14O94880 888 aa12.11□□□□□ -0.47
ZEB1-206ENST00000488625 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
ZEB1-206ENST00000488625 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
ZEB1-206ENST00000488625 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
ZEB1-206ENST00000488625 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 REC8O95072 547 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 ARID3AQ99856 593 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 MRE11P49959 708 aa12.1□□□□□ -0.47
ZEB1-206ENST00000488625 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
ZEB1-206ENST00000488625 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
ZEB1-206ENST00000488625 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 ATF7IPQ6VMQ6 1270 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 HSP90AA2PQ14568 343 aaPredicted RBP12.09□□□□□ -0.47
ZEB1-206ENST00000488625 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
ZEB1-206ENST00000488625 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.47
ZEB1-206ENST00000488625 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
ZEB1-206ENST00000488625 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 IGHDP01880 384 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 CDK19Q9BWU1 502 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 EVA1CP58658 441 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 PSME1Q06323 249 aa12.08□□□□□ -0.48
ZEB1-206ENST00000488625 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.48
ZEB1-206ENST00000488625 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.48
ZEB1-206ENST00000488625 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
ZEB1-206ENST00000488625 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
ZEB1-206ENST00000488625 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
ZEB1-206ENST00000488625 NUCB2P80303 420 aa12.07□□□□□ -0.48
ZEB1-206ENST00000488625 CEP170Q5SW79 1584 aa12.07□□□□□ -0.48
ZEB1-206ENST00000488625 NOS1P29475 1434 aa12.06□□□□□ -0.48
ZEB1-206ENST00000488625 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
ZEB1-206ENST00000488625 A2MP01023 1474 aa12.06□□□□□ -0.48
ZEB1-206ENST00000488625 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
ZEB1-206ENST00000488625 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
ZEB1-206ENST00000488625 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
ZEB1-206ENST00000488625 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
ZEB1-206ENST00000488625 TSPYL4Q9UJ04 414 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms