RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
SCMH1-215ENST00000488592 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
SCMH1-215ENST00000488592 HRCP23327 699 aa18.58■□□□□ 0.56
SCMH1-215ENST00000488592 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
SCMH1-215ENST00000488592 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
SCMH1-215ENST00000488592 KIF1AQ12756 1690 aa18.57■□□□□ 0.56
SCMH1-215ENST00000488592 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
SCMH1-215ENST00000488592 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
SCMH1-215ENST00000488592 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
SCMH1-215ENST00000488592 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
SCMH1-215ENST00000488592 STAC3Q96MF2 364 aa18.54■□□□□ 0.56
SCMH1-215ENST00000488592 PXDNQ92626 1479 aa18.53■□□□□ 0.56
SCMH1-215ENST00000488592 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
SCMH1-215ENST00000488592 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
SCMH1-215ENST00000488592 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
SCMH1-215ENST00000488592 AFF2P51816 1311 aa18.51■□□□□ 0.55
SCMH1-215ENST00000488592 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
SCMH1-215ENST00000488592 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
SCMH1-215ENST00000488592 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
SCMH1-215ENST00000488592 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
SCMH1-215ENST00000488592 RXRBP28702 533 aa18.5■□□□□ 0.55
SCMH1-215ENST00000488592 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
SCMH1-215ENST00000488592 ADGRB1O14514 1584 aa18.48■□□□□ 0.55
SCMH1-215ENST00000488592 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
SCMH1-215ENST00000488592 STK26Q9P289 416 aa18.48■□□□□ 0.55
SCMH1-215ENST00000488592 PLEKHH1Q9ULM0 1364 aa18.47■□□□□ 0.55
SCMH1-215ENST00000488592 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
SCMH1-215ENST00000488592 WAPLQ7Z5K2 1190 aa18.47■□□□□ 0.55
SCMH1-215ENST00000488592 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
SCMH1-215ENST00000488592 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
SCMH1-215ENST00000488592 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
SCMH1-215ENST00000488592 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
SCMH1-215ENST00000488592 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
SCMH1-215ENST00000488592 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
SCMH1-215ENST00000488592 CFAP70Q5T0N1 1121 aa18.43■□□□□ 0.54
SCMH1-215ENST00000488592 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
SCMH1-215ENST00000488592 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
SCMH1-215ENST00000488592 FOXO3O43524 673 aa18.41■□□□□ 0.54
SCMH1-215ENST00000488592 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
SCMH1-215ENST00000488592 RGS12O14924 1447 aa18.4■□□□□ 0.54
SCMH1-215ENST00000488592 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
SCMH1-215ENST00000488592 ATRNO75882 1429 aa18.4■□□□□ 0.54
SCMH1-215ENST00000488592 ADAMTS2O95450 1211 aa18.39■□□□□ 0.53
SCMH1-215ENST00000488592 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
SCMH1-215ENST00000488592 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
SCMH1-215ENST00000488592 SBNO1A3KN83 1393 aa18.39■□□□□ 0.53
SCMH1-215ENST00000488592 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
SCMH1-215ENST00000488592 UPF1Q92900 1129 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCMH1-215ENST00000488592 PRAM1Q96QH2 718 aa18.38■□□□□ 0.53
SCMH1-215ENST00000488592 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
SCMH1-215ENST00000488592 USP21Q9UK80 565 aa18.37■□□□□ 0.53
SCMH1-215ENST00000488592 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
SCMH1-215ENST00000488592 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
SCMH1-215ENST00000488592 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
SCMH1-215ENST00000488592 PSME1Q06323 249 aa18.36■□□□□ 0.53
SCMH1-215ENST00000488592 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
SCMH1-215ENST00000488592 TULP4Q9NRJ4 1543 aa18.36■□□□□ 0.53
SCMH1-215ENST00000488592 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
SCMH1-215ENST00000488592 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
SCMH1-215ENST00000488592 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
SCMH1-215ENST00000488592 POGKQ9P215 609 aa18.35■□□□□ 0.53
SCMH1-215ENST00000488592 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
SCMH1-215ENST00000488592 SLIT2O94813 1529 aa18.33■□□□□ 0.53
SCMH1-215ENST00000488592 TRPM3Q9HCF6 1732 aaPredicted RBP18.33■□□□□ 0.52
SCMH1-215ENST00000488592 NUTM2FA1L443 756 aa18.33■□□□□ 0.52
SCMH1-215ENST00000488592 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.52
SCMH1-215ENST00000488592 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
SCMH1-215ENST00000488592 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
SCMH1-215ENST00000488592 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
SCMH1-215ENST00000488592 PLCH1Q4KWH8 1693 aa18.28■□□□□ 0.52
SCMH1-215ENST00000488592 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
SCMH1-215ENST00000488592 EP400Q96L91 3159 aa18.27■□□□□ 0.52
SCMH1-215ENST00000488592 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
SCMH1-215ENST00000488592 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCMH1-215ENST00000488592 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
SCMH1-215ENST00000488592 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.52
SCMH1-215ENST00000488592 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
SCMH1-215ENST00000488592 ATP7BP35670 1465 aa18.26■□□□□ 0.51
SCMH1-215ENST00000488592 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
SCMH1-215ENST00000488592 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
SCMH1-215ENST00000488592 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
SCMH1-215ENST00000488592 GLI3P10071 1580 aa18.25■□□□□ 0.51
SCMH1-215ENST00000488592 RALGAPBQ86X10 1494 aa18.24■□□□□ 0.51
SCMH1-215ENST00000488592 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
SCMH1-215ENST00000488592 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
SCMH1-215ENST00000488592 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
SCMH1-215ENST00000488592 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
SCMH1-215ENST00000488592 NRAPQ86VF7 1730 aa18.22■□□□□ 0.51
SCMH1-215ENST00000488592 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
SCMH1-215ENST00000488592 VPS72Q15906 364 aa18.2■□□□□ 0.5
SCMH1-215ENST00000488592 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
SCMH1-215ENST00000488592 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
SCMH1-215ENST00000488592 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
SCMH1-215ENST00000488592 BRWD3Q6RI45 1802 aa18.18■□□□□ 0.5
SCMH1-215ENST00000488592 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
SCMH1-215ENST00000488592 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
SCMH1-215ENST00000488592 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
SCMH1-215ENST00000488592 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
SCMH1-215ENST00000488592 CABLES1Q8TDN4 633 aa18.15■□□□□ 0.5
SCMH1-215ENST00000488592 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms