RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
ABCA2-219ENST00000488535 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
ABCA2-219ENST00000488535 ANTXR1Q9H6X2 564 aa16.56■□□□□ 0.24
ABCA2-219ENST00000488535 CFAP65Q6ZU64 1925 aaKnown RBP16.56■□□□□ 0.24
ABCA2-219ENST00000488535 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
ABCA2-219ENST00000488535 MSNP26038 577 aaKnown RBP16.55■□□□□ 0.24
ABCA2-219ENST00000488535 MAST1Q9Y2H9 1570 aa16.55■□□□□ 0.24
ABCA2-219ENST00000488535 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
ABCA2-219ENST00000488535 PLXNC1O60486 1568 aa16.54■□□□□ 0.24
ABCA2-219ENST00000488535 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
ABCA2-219ENST00000488535 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
ABCA2-219ENST00000488535 FTSJ3Q8IY81 847 aaKnown RBP16.53■□□□□ 0.24
ABCA2-219ENST00000488535 STK26Q9P289 416 aa16.53■□□□□ 0.24
ABCA2-219ENST00000488535 UGGT1Q9NYU2 1555 aa16.53■□□□□ 0.24
ABCA2-219ENST00000488535 GAS2L3Q86XJ1 694 aa16.53■□□□□ 0.24
ABCA2-219ENST00000488535 TESK2Q96S53 571 aa16.53■□□□□ 0.24
ABCA2-219ENST00000488535 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.23
ABCA2-219ENST00000488535 ATP10AO60312 1499 aa16.51■□□□□ 0.23
ABCA2-219ENST00000488535 RLBP1P12271 317 aa16.5■□□□□ 0.23
ABCA2-219ENST00000488535 MPNDQ8N594 471 aa16.5■□□□□ 0.23
ABCA2-219ENST00000488535 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
ABCA2-219ENST00000488535 ABCA9Q8IUA7 1624 aa16.5■□□□□ 0.23
ABCA2-219ENST00000488535 UNC13BO14795 1591 aa16.5■□□□□ 0.23
ABCA2-219ENST00000488535 KDM5CP41229 1560 aa16.49■□□□□ 0.23
ABCA2-219ENST00000488535 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
ABCA2-219ENST00000488535 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
ABCA2-219ENST00000488535 E9PSI1 815 aa16.48■□□□□ 0.23
ABCA2-219ENST00000488535 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
ABCA2-219ENST00000488535 IQGAP3Q86VI3 1631 aa16.48■□□□□ 0.23
ABCA2-219ENST00000488535 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
ABCA2-219ENST00000488535 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
ABCA2-219ENST00000488535 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 POGZQ7Z3K3 1410 aa16.47■□□□□ 0.23
ABCA2-219ENST00000488535 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 FOXD4L5Q5VV16 416 aaPredicted RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 FOXD4L4Q8WXT5 416 aaPredicted RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 TNPO1Q92973 898 aaKnown RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 DDX49Q9Y6V7 483 aaKnown RBP16.47■□□□□ 0.23
ABCA2-219ENST00000488535 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
ABCA2-219ENST00000488535 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
ABCA2-219ENST00000488535 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
ABCA2-219ENST00000488535 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
ABCA2-219ENST00000488535 IDI1Q13907 227 aa16.44■□□□□ 0.22
ABCA2-219ENST00000488535 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
ABCA2-219ENST00000488535 ARAP3Q8WWN8 1544 aa16.44■□□□□ 0.22
ABCA2-219ENST00000488535 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
ABCA2-219ENST00000488535 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
ABCA2-219ENST00000488535 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
ABCA2-219ENST00000488535 NOS1P29475 1434 aa16.43■□□□□ 0.22
ABCA2-219ENST00000488535 TPM2P07951 284 aa16.42■□□□□ 0.22
ABCA2-219ENST00000488535 E9PCH4 1651 aa16.42■□□□□ 0.22
ABCA2-219ENST00000488535 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
ABCA2-219ENST00000488535 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
ABCA2-219ENST00000488535 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
ABCA2-219ENST00000488535 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
ABCA2-219ENST00000488535 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
ABCA2-219ENST00000488535 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
ABCA2-219ENST00000488535 NKTRP30414 1462 aaKnown RBP16.4■□□□□ 0.22
ABCA2-219ENST00000488535 NPATQ14207 1427 aa16.4■□□□□ 0.22
ABCA2-219ENST00000488535 GOLGA6L22H0YM25 854 aa16.4■□□□□ 0.22
ABCA2-219ENST00000488535 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
ABCA2-219ENST00000488535 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
ABCA2-219ENST00000488535 PRDM15P57071 1507 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 SSFA2P28290 1259 aa16.39■□□□□ 0.21
ABCA2-219ENST00000488535 TSR2Q969E8 191 aaKnown RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 INO80Q9ULG1 1556 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-219ENST00000488535 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
ABCA2-219ENST00000488535 RNF214Q8ND24 703 aa16.39■□□□□ 0.21
ABCA2-219ENST00000488535 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 PTMAP06454 111 aaKnown RBP16.38■□□□□ 0.21
ABCA2-219ENST00000488535 UQCRHP07919 91 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 SMC4Q9NTJ3 1288 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 PTPRTO14522 1441 aa16.38■□□□□ 0.21
ABCA2-219ENST00000488535 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
ABCA2-219ENST00000488535 RARSP54136 660 aaKnown RBP16.37■□□□□ 0.21
ABCA2-219ENST00000488535 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
ABCA2-219ENST00000488535 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
ABCA2-219ENST00000488535 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
ABCA2-219ENST00000488535 TRPM2O94759 1503 aa16.36■□□□□ 0.21
ABCA2-219ENST00000488535 TSPOAP1O95153 1857 aa16.36■□□□□ 0.21
ABCA2-219ENST00000488535 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
ABCA2-219ENST00000488535 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
ABCA2-219ENST00000488535 TRPM1Q7Z4N2 1603 aa16.35■□□□□ 0.21
ABCA2-219ENST00000488535 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
ABCA2-219ENST00000488535 FAM177BA6PVY3 158 aa16.34■□□□□ 0.21
ABCA2-219ENST00000488535 MLH3Q9UHC1 1453 aa16.34■□□□□ 0.21
ABCA2-219ENST00000488535 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
ABCA2-219ENST00000488535 TSC1Q92574 1164 aa16.34■□□□□ 0.21
ABCA2-219ENST00000488535 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
ABCA2-219ENST00000488535 SCAF11Q99590 1463 aaKnown RBP16.34■□□□□ 0.21
ABCA2-219ENST00000488535 APBB1O00213 710 aa16.34■□□□□ 0.21
ABCA2-219ENST00000488535 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
ABCA2-219ENST00000488535 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms