RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 FOXO3O43524 673 aa16.46■□□□□ 0.23
LCN2-206ENST00000488391 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
LCN2-206ENST00000488391 GJD4Q96KN9 370 aaPredicted RBP16.46■□□□□ 0.23
LCN2-206ENST00000488391 KIF1BO60333 1816 aa16.46■□□□□ 0.23
LCN2-206ENST00000488391 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
LCN2-206ENST00000488391 NPHP3Q7Z494 1330 aa16.45■□□□□ 0.22
LCN2-206ENST00000488391 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
LCN2-206ENST00000488391 EP400Q96L91 3159 aa16.42■□□□□ 0.22
LCN2-206ENST00000488391 MYOM2P54296 1465 aa16.42■□□□□ 0.22
LCN2-206ENST00000488391 COL22A1Q8NFW1 1626 aaPredicted RBP16.42■□□□□ 0.22
LCN2-206ENST00000488391 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
LCN2-206ENST00000488391 STK26Q9P289 416 aa16.41■□□□□ 0.22
LCN2-206ENST00000488391 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LCN2-206ENST00000488391 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
LCN2-206ENST00000488391 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
LCN2-206ENST00000488391 UNC5CLQ8IV45 518 aa16.39■□□□□ 0.21
LCN2-206ENST00000488391 PXDNQ92626 1479 aa16.39■□□□□ 0.21
LCN2-206ENST00000488391 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
LCN2-206ENST00000488391 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
LCN2-206ENST00000488391 PRAG1Q86YV5 1406 aa16.36■□□□□ 0.21
LCN2-206ENST00000488391 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
LCN2-206ENST00000488391 NAIPQ13075 1403 aa16.36■□□□□ 0.21
LCN2-206ENST00000488391 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
LCN2-206ENST00000488391 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
LCN2-206ENST00000488391 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
LCN2-206ENST00000488391 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
LCN2-206ENST00000488391 SF3B2Q13435 895 aaKnown RBP16.34■□□□□ 0.21
LCN2-206ENST00000488391 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
LCN2-206ENST00000488391 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
LCN2-206ENST00000488391 GLI3P10071 1580 aa16.33■□□□□ 0.2
LCN2-206ENST00000488391 PPLO60437 1756 aa16.33■□□□□ 0.2
LCN2-206ENST00000488391 SLIT2O94813 1529 aa16.32■□□□□ 0.2
LCN2-206ENST00000488391 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
LCN2-206ENST00000488391 CCDC9Q9Y3X0 531 aaKnown RBP16.32■□□□□ 0.2
LCN2-206ENST00000488391 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
LCN2-206ENST00000488391 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
LCN2-206ENST00000488391 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
LCN2-206ENST00000488391 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
LCN2-206ENST00000488391 VPS72Q15906 364 aa16.29■□□□□ 0.2
LCN2-206ENST00000488391 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
LCN2-206ENST00000488391 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
LCN2-206ENST00000488391 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
LCN2-206ENST00000488391 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
LCN2-206ENST00000488391 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
LCN2-206ENST00000488391 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
LCN2-206ENST00000488391 PSME1Q06323 249 aa16.27■□□□□ 0.2
LCN2-206ENST00000488391 A0A0G2JS52 829 aa16.26■□□□□ 0.19
LCN2-206ENST00000488391 MYT1Q01538 1121 aa16.26■□□□□ 0.19
LCN2-206ENST00000488391 PHF8Q9UPP1 1060 aa16.26■□□□□ 0.19
LCN2-206ENST00000488391 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
LCN2-206ENST00000488391 TECPR2O15040 1411 aa16.26■□□□□ 0.19
LCN2-206ENST00000488391 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
LCN2-206ENST00000488391 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
LCN2-206ENST00000488391 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
LCN2-206ENST00000488391 BAG6P46379 1132 aa16.23■□□□□ 0.19
LCN2-206ENST00000488391 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
LCN2-206ENST00000488391 RGPD8O14715 1765 aaPredicted RBP16.23■□□□□ 0.19
LCN2-206ENST00000488391 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
LCN2-206ENST00000488391 HRCP23327 699 aa16.22■□□□□ 0.19
LCN2-206ENST00000488391 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
LCN2-206ENST00000488391 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
LCN2-206ENST00000488391 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
LCN2-206ENST00000488391 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
LCN2-206ENST00000488391 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
LCN2-206ENST00000488391 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
LCN2-206ENST00000488391 EN1Q05925 392 aaPredicted RBP16.2■□□□□ 0.18
LCN2-206ENST00000488391 FAM182BQ5T319 152 aa16.2■□□□□ 0.18
LCN2-206ENST00000488391 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
LCN2-206ENST00000488391 PLCH1Q4KWH8 1693 aa16.19■□□□□ 0.18
LCN2-206ENST00000488391 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
LCN2-206ENST00000488391 CFAP70Q5T0N1 1121 aa16.18■□□□□ 0.18
LCN2-206ENST00000488391 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
LCN2-206ENST00000488391 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
LCN2-206ENST00000488391 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
LCN2-206ENST00000488391 KNDC1Q76NI1 1749 aa16.18■□□□□ 0.18
LCN2-206ENST00000488391 LRP5O75197 1615 aa16.18■□□□□ 0.18
LCN2-206ENST00000488391 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
LCN2-206ENST00000488391 ARHGEF10O15013 1369 aa16.17■□□□□ 0.18
LCN2-206ENST00000488391 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
LCN2-206ENST00000488391 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
LCN2-206ENST00000488391 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
LCN2-206ENST00000488391 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
LCN2-206ENST00000488391 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
LCN2-206ENST00000488391 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
LCN2-206ENST00000488391 POGKQ9P215 609 aa16.15■□□□□ 0.18
LCN2-206ENST00000488391 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
LCN2-206ENST00000488391 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
LCN2-206ENST00000488391 EZH2Q15910 746 aaKnown RBP16.11■□□□□ 0.17
LCN2-206ENST00000488391 SPATA31A5Q5VU36 1347 aa16.11■□□□□ 0.17
LCN2-206ENST00000488391 SPATA31A7Q8IWB4 1347 aa16.11■□□□□ 0.17
LCN2-206ENST00000488391 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
LCN2-206ENST00000488391 GPRASP1Q5JY77 1395 aa16.09■□□□□ 0.17
LCN2-206ENST00000488391 NRAPQ86VF7 1730 aa16.08■□□□□ 0.17
LCN2-206ENST00000488391 TRIM37O94972 964 aa16.08■□□□□ 0.16
LCN2-206ENST00000488391 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms