RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
CD55-209ENST00000488171 YTHDC2Q9H6S0 1430 aaKnown RBP28.52■■■□□ 2.16
CD55-209ENST00000488171 MEX3CQ5U5Q3 659 aaKnown RBP28.52■■■□□ 2.16
CD55-209ENST00000488171 C14orf93Q9H972 538 aaKnown RBP28.52■■■□□ 2.16
CD55-209ENST00000488171 HRCP23327 699 aa28.51■■■□□ 2.16
CD55-209ENST00000488171 PLEKHH1Q9ULM0 1364 aa28.5■■■□□ 2.15
CD55-209ENST00000488171 NUTM2BA6NNL0 878 aaPredicted RBP28.5■■■□□ 2.15
CD55-209ENST00000488171 NUTM2EB1AL46 878 aaPredicted RBP28.5■■■□□ 2.15
CD55-209ENST00000488171 NUTM2AQ8IVF1 878 aaPredicted RBP28.5■■■□□ 2.15
CD55-209ENST00000488171 PNPLA6Q8IY17 1366 aa28.49■■■□□ 2.15
CD55-209ENST00000488171 SOS2Q07890 1332 aaPredicted RBP28.47■■■□□ 2.15
CD55-209ENST00000488171 CFAP70Q5T0N1 1121 aa28.47■■■□□ 2.15
CD55-209ENST00000488171 ZNF772Q68DY9 489 aaPredicted RBP28.44■■■□□ 2.14
CD55-209ENST00000488171 SIRT1Q96EB6 747 aa28.43■■■□□ 2.14
CD55-209ENST00000488171 ESCO1Q5FWF5 840 aa28.42■■■□□ 2.14
CD55-209ENST00000488171 DHX57Q6P158 1386 aaKnown RBP28.42■■■□□ 2.14
CD55-209ENST00000488171 FMN2Q9NZ56 1722 aa28.41■■■□□ 2.14
CD55-209ENST00000488171 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
CD55-209ENST00000488171 NPHP3Q7Z494 1330 aa28.37■■■□□ 2.13
CD55-209ENST00000488171 PXDNQ92626 1479 aa28.37■■■□□ 2.13
CD55-209ENST00000488171 ADGRB1O14514 1584 aa28.37■■■□□ 2.13
CD55-209ENST00000488171 AFF2P51816 1311 aa28.37■■■□□ 2.13
CD55-209ENST00000488171 COL22A1Q8NFW1 1626 aaPredicted RBP28.35■■■□□ 2.13
CD55-209ENST00000488171 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
CD55-209ENST00000488171 FOXO3O43524 673 aa28.34■■■□□ 2.13
CD55-209ENST00000488171 DCAF11Q8TEB1 546 aa28.34■■■□□ 2.13
CD55-209ENST00000488171 KDM2AQ9Y2K7 1162 aa28.34■■■□□ 2.13
CD55-209ENST00000488171 C8orf37Q96NL8 207 aa28.33■■■□□ 2.13
CD55-209ENST00000488171 PRAM1Q96QH2 718 aa28.33■■■□□ 2.13
CD55-209ENST00000488171 ADAMTS2O95450 1211 aa28.3■■■□□ 2.12
CD55-209ENST00000488171 XPCQ01831 940 aaPredicted RBP28.3■■■□□ 2.12
CD55-209ENST00000488171 KIF1AQ12756 1690 aa28.3■■■□□ 2.12
CD55-209ENST00000488171 SAFB2Q14151 953 aaKnown RBP eCLIP28.29■■■□□ 2.12
CD55-209ENST00000488171 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
CD55-209ENST00000488171 RGPD8O14715 1765 aaPredicted RBP28.28■■■□□ 2.12
CD55-209ENST00000488171 RXRBP28702 533 aa28.27■■■□□ 2.12
CD55-209ENST00000488171 POGKQ9P215 609 aa28.25■■■□□ 2.11
CD55-209ENST00000488171 ADGRB2O60241 1585 aa28.25■■■□□ 2.11
CD55-209ENST00000488171 NGLY1Q96IV0 654 aa28.24■■■□□ 2.11
CD55-209ENST00000488171 TRAK1Q9UPV9 953 aa28.24■■■□□ 2.11
CD55-209ENST00000488171 CDK12Q9NYV4 1490 aaPredicted RBP28.24■■■□□ 2.11
CD55-209ENST00000488171 QTRT2Q9H974 415 aaKnown RBP28.22■■■□□ 2.11
CD55-209ENST00000488171 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
CD55-209ENST00000488171 PHF8Q9UPP1 1060 aa28.21■■■□□ 2.11
CD55-209ENST00000488171 SPATA31A3Q5VYP0 1347 aa28.19■■■□□ 2.1
CD55-209ENST00000488171 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
CD55-209ENST00000488171 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
CD55-209ENST00000488171 KRT28Q7Z3Y7 464 aa28.18■■■□□ 2.1
CD55-209ENST00000488171 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
CD55-209ENST00000488171 RBM6P78332 1123 aaKnown RBP28.16■■■□□ 2.1
CD55-209ENST00000488171 HIRIP3Q9BW71 556 aaPredicted RBP28.16■■■□□ 2.1
CD55-209ENST00000488171 USP21Q9UK80 565 aa28.15■■■□□ 2.1
CD55-209ENST00000488171 ARHGEF28Q8N1W1 1705 aaKnown RBP28.15■■■□□ 2.1
CD55-209ENST00000488171 MINK1Q8N4C8 1332 aaPredicted RBP28.14■■■□□ 2.1
CD55-209ENST00000488171 RGS12O14924 1447 aa28.14■■■□□ 2.1
CD55-209ENST00000488171 TNS3Q68CZ2 1445 aa28.13■■■□□ 2.09
CD55-209ENST00000488171 KIAA1210Q9ULL0 1709 aa28.11■■■□□ 2.09
CD55-209ENST00000488171 TULP4Q9NRJ4 1543 aa28.11■■■□□ 2.09
CD55-209ENST00000488171 PRR36Q9H6K5 1346 aa28.11■■■□□ 2.09
CD55-209ENST00000488171 ATRNO75882 1429 aa28.1■■■□□ 2.09
CD55-209ENST00000488171 PSME1Q06323 249 aa28.1■■■□□ 2.09
CD55-209ENST00000488171 PMFBP1Q8TBY8 1022 aa28.1■■■□□ 2.09
CD55-209ENST00000488171 UPF1Q92900 1129 aaKnown RBP eCLIP28.1■■■□□ 2.09
CD55-209ENST00000488171 BCL9LQ86UU0 1499 aa28.09■■■□□ 2.09
CD55-209ENST00000488171 SBNO1A3KN83 1393 aa28.09■■■□□ 2.09
CD55-209ENST00000488171 WASLO00401 505 aaPredicted RBP28.09■■■□□ 2.09
CD55-209ENST00000488171 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
CD55-209ENST00000488171 EIF3AQ14152 1382 aaKnown RBP28.08■■■□□ 2.09
CD55-209ENST00000488171 TRPM3Q9HCF6 1732 aaPredicted RBP28.05■■■□□ 2.08
CD55-209ENST00000488171 ABCA3Q99758 1704 aa28.03■■■□□ 2.08
CD55-209ENST00000488171 NBPF1Q3BBV0 1214 aa28.02■■■□□ 2.08
CD55-209ENST00000488171 CABLES1Q8TDN4 633 aa28.02■■■□□ 2.08
CD55-209ENST00000488171 ARHGEF10O15013 1369 aa28.02■■■□□ 2.08
CD55-209ENST00000488171 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.02■■■□□ 2.08
CD55-209ENST00000488171 SLIT2O94813 1529 aa28.02■■■□□ 2.08
CD55-209ENST00000488171 ATP7BP35670 1465 aa28■■■□□ 2.07
CD55-209ENST00000488171 LMOD2Q6P5Q4 547 aa27.99■■■□□ 2.07
CD55-209ENST00000488171 ALS2Q96Q42 1657 aa27.99■■■□□ 2.07
CD55-209ENST00000488171 GPRASP1Q5JY77 1395 aa27.97■■■□□ 2.07
CD55-209ENST00000488171 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
CD55-209ENST00000488171 PLEKHG5O94827 1062 aa27.97■■■□□ 2.07
CD55-209ENST00000488171 HAP1P54257 671 aaPredicted RBP27.97■■■□□ 2.07
CD55-209ENST00000488171 UNC5CLQ8IV45 518 aa27.97■■■□□ 2.07
CD55-209ENST00000488171 L3MBTL2Q969R5 705 aa27.96■■■□□ 2.07
CD55-209ENST00000488171 NUDT16Q96DE0 195 aaKnown RBP27.96■■■□□ 2.07
CD55-209ENST00000488171 SIN3AQ96ST3 1273 aa27.96■■■□□ 2.07
CD55-209ENST00000488171 GJD4Q96KN9 370 aaPredicted RBP27.95■■■□□ 2.06
CD55-209ENST00000488171 NGDNQ8NEJ9 315 aaKnown RBP27.94■■■□□ 2.06
CD55-209ENST00000488171 CDK19Q9BWU1 502 aa27.94■■■□□ 2.06
CD55-209ENST00000488171 PLCH1Q4KWH8 1693 aa27.93■■■□□ 2.06
CD55-209ENST00000488171 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
CD55-209ENST00000488171 GLI3P10071 1580 aa27.92■■■□□ 2.06
CD55-209ENST00000488171 NWD2Q9ULI1 1742 aa27.91■■■□□ 2.06
CD55-209ENST00000488171 RALGAPBQ86X10 1494 aa27.9■■■□□ 2.06
CD55-209ENST00000488171 ATAD2Q6PL18 1390 aa27.89■■■□□ 2.06
CD55-209ENST00000488171 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.05
CD55-209ENST00000488171 CENPJQ9HC77 1338 aaPredicted RBP27.87■■■□□ 2.05
CD55-209ENST00000488171 TRPM1Q7Z4N2 1603 aa27.87■■■□□ 2.05
CD55-209ENST00000488171 FAM83GA6ND36 823 aa27.86■■■□□ 2.05
CD55-209ENST00000488171 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms