RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 CDC42BPGQ6DT37 1551 aa25.32■■□□□ 1.64
ITSN1-230ENST00000488166 QTRT2Q9H974 415 aaKnown RBP25.32■■□□□ 1.64
ITSN1-230ENST00000488166 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
ITSN1-230ENST00000488166 ESCO1Q5FWF5 840 aa25.31■■□□□ 1.64
ITSN1-230ENST00000488166 ANKRD30BQ9BXX2 1392 aa25.3■■□□□ 1.64
ITSN1-230ENST00000488166 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
ITSN1-230ENST00000488166 KNDC1Q76NI1 1749 aa25.29■■□□□ 1.64
ITSN1-230ENST00000488166 RBM6P78332 1123 aaKnown RBP25.28■■□□□ 1.64
ITSN1-230ENST00000488166 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
ITSN1-230ENST00000488166 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
ITSN1-230ENST00000488166 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
ITSN1-230ENST00000488166 WAPLQ7Z5K2 1190 aa25.26■■□□□ 1.63
ITSN1-230ENST00000488166 NPHP3Q7Z494 1330 aa25.26■■□□□ 1.63
ITSN1-230ENST00000488166 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
ITSN1-230ENST00000488166 RGS12O14924 1447 aa25.25■■□□□ 1.63
ITSN1-230ENST00000488166 MARF1Q9Y4F3 1742 aaKnown RBP25.24■■□□□ 1.63
ITSN1-230ENST00000488166 TECPR2O15040 1411 aa25.22■■□□□ 1.63
ITSN1-230ENST00000488166 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
ITSN1-230ENST00000488166 FOXO3O43524 673 aa25.22■■□□□ 1.63
ITSN1-230ENST00000488166 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
ITSN1-230ENST00000488166 USP21Q9UK80 565 aa25.22■■□□□ 1.63
ITSN1-230ENST00000488166 FMN2Q9NZ56 1722 aa25.22■■□□□ 1.63
ITSN1-230ENST00000488166 ABCC11Q96J66 1382 aa25.2■■□□□ 1.63
ITSN1-230ENST00000488166 RGPD8O14715 1765 aaPredicted RBP25.2■■□□□ 1.62
ITSN1-230ENST00000488166 PXDNQ92626 1479 aa25.2■■□□□ 1.62
ITSN1-230ENST00000488166 PLEKHH1Q9ULM0 1364 aa25.19■■□□□ 1.62
ITSN1-230ENST00000488166 ACIN1Q9UKV3 1341 aaKnown RBP25.19■■□□□ 1.62
ITSN1-230ENST00000488166 YTHDC2Q9H6S0 1430 aaKnown RBP25.19■■□□□ 1.62
ITSN1-230ENST00000488166 KIF1AQ12756 1690 aa25.17■■□□□ 1.62
ITSN1-230ENST00000488166 TRPC5Q9UL62 973 aaPredicted RBP25.17■■□□□ 1.62
ITSN1-230ENST00000488166 MYOM2P54296 1465 aa25.15■■□□□ 1.62
ITSN1-230ENST00000488166 FNBP4Q8N3X1 1017 aaPredicted RBP25.14■■□□□ 1.62
ITSN1-230ENST00000488166 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
ITSN1-230ENST00000488166 CFAP70Q5T0N1 1121 aa25.11■■□□□ 1.61
ITSN1-230ENST00000488166 C14orf93Q9H972 538 aaKnown RBP25.11■■□□□ 1.61
ITSN1-230ENST00000488166 ATRNO75882 1429 aa25.1■■□□□ 1.61
ITSN1-230ENST00000488166 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.61
ITSN1-230ENST00000488166 RAB3GAP2Q9H2M9 1393 aa25.08■■□□□ 1.61
ITSN1-230ENST00000488166 SAFB2Q14151 953 aaKnown RBP eCLIP25.08■■□□□ 1.61
ITSN1-230ENST00000488166 SIRT1Q96EB6 747 aa25.08■■□□□ 1.61
ITSN1-230ENST00000488166 NRXN1Q9ULB1 1477 aa25.08■■□□□ 1.6
ITSN1-230ENST00000488166 KRT28Q7Z3Y7 464 aa25.07■■□□□ 1.6
ITSN1-230ENST00000488166 SPATA31A3Q5VYP0 1347 aa25.06■■□□□ 1.6
ITSN1-230ENST00000488166 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.06■■□□□ 1.6
ITSN1-230ENST00000488166 BCL9LQ86UU0 1499 aa25.05■■□□□ 1.6
ITSN1-230ENST00000488166 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
ITSN1-230ENST00000488166 PRAM1Q96QH2 718 aa25.05■■□□□ 1.6
ITSN1-230ENST00000488166 POGKQ9P215 609 aa25.04■■□□□ 1.6
ITSN1-230ENST00000488166 PHF8Q9UPP1 1060 aa25.04■■□□□ 1.6
ITSN1-230ENST00000488166 PLEKHG5O94827 1062 aa25.03■■□□□ 1.6
ITSN1-230ENST00000488166 USP32Q8NFA0 1604 aa25.02■■□□□ 1.6
ITSN1-230ENST00000488166 PSME1Q06323 249 aa25.02■■□□□ 1.6
ITSN1-230ENST00000488166 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
ITSN1-230ENST00000488166 GJD4Q96KN9 370 aaPredicted RBP25■■□□□ 1.59
ITSN1-230ENST00000488166 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
ITSN1-230ENST00000488166 DLC1Q96QB1 1528 aa24.99■■□□□ 1.59
ITSN1-230ENST00000488166 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
ITSN1-230ENST00000488166 UNC5CLQ8IV45 518 aa24.97■■□□□ 1.59
ITSN1-230ENST00000488166 ABCA3Q99758 1704 aa24.97■■□□□ 1.59
ITSN1-230ENST00000488166 PMFBP1Q8TBY8 1022 aa24.96■■□□□ 1.59
ITSN1-230ENST00000488166 TRAK1Q9UPV9 953 aa24.96■■□□□ 1.59
ITSN1-230ENST00000488166 PLCH1Q4KWH8 1693 aa24.96■■□□□ 1.59
ITSN1-230ENST00000488166 SLIT2O94813 1529 aa24.96■■□□□ 1.59
ITSN1-230ENST00000488166 CABLES1Q8TDN4 633 aa24.95■■□□□ 1.58
ITSN1-230ENST00000488166 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
ITSN1-230ENST00000488166 ADGRB2O60241 1585 aa24.95■■□□□ 1.58
ITSN1-230ENST00000488166 BRWD3Q6RI45 1802 aa24.95■■□□□ 1.58
ITSN1-230ENST00000488166 ADGRB1O14514 1584 aa24.94■■□□□ 1.58
ITSN1-230ENST00000488166 GLI3P10071 1580 aa24.94■■□□□ 1.58
ITSN1-230ENST00000488166 NWD2Q9ULI1 1742 aa24.93■■□□□ 1.58
ITSN1-230ENST00000488166 HIRIP3Q9BW71 556 aaPredicted RBP24.93■■□□□ 1.58
ITSN1-230ENST00000488166 RALGAPBQ86X10 1494 aa24.93■■□□□ 1.58
ITSN1-230ENST00000488166 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
ITSN1-230ENST00000488166 EP400Q96L91 3159 aa24.93■■□□□ 1.58
ITSN1-230ENST00000488166 SBNO1A3KN83 1393 aa24.93■■□□□ 1.58
ITSN1-230ENST00000488166 ARHGEF10O15013 1369 aa24.92■■□□□ 1.58
ITSN1-230ENST00000488166 MINK1Q8N4C8 1332 aaPredicted RBP24.91■■□□□ 1.58
ITSN1-230ENST00000488166 CCDC9Q9Y3X0 531 aaKnown RBP24.9■■□□□ 1.58
ITSN1-230ENST00000488166 CCDC125Q86Z20 511 aa24.88■■□□□ 1.57
ITSN1-230ENST00000488166 TRPM3Q9HCF6 1732 aaPredicted RBP24.88■■□□□ 1.57
ITSN1-230ENST00000488166 EIF3AQ14152 1382 aaKnown RBP24.87■■□□□ 1.57
ITSN1-230ENST00000488166 GPRASP1Q5JY77 1395 aa24.86■■□□□ 1.57
ITSN1-230ENST00000488166 ARHGEF28Q8N1W1 1705 aaKnown RBP24.86■■□□□ 1.57
ITSN1-230ENST00000488166 TULP4Q9NRJ4 1543 aa24.86■■□□□ 1.57
ITSN1-230ENST00000488166 ALS2Q96Q42 1657 aa24.85■■□□□ 1.57
ITSN1-230ENST00000488166 ITSN1Q15811 1721 aa24.84■■□□□ 1.57
ITSN1-230ENST00000488166 VPS72Q15906 364 aa24.84■■□□□ 1.57
ITSN1-230ENST00000488166 STAC3Q96MF2 364 aa24.84■■□□□ 1.57
ITSN1-230ENST00000488166 ZRANB1Q9UGI0 708 aa24.84■■□□□ 1.57
ITSN1-230ENST00000488166 WASLO00401 505 aaPredicted RBP24.82■■□□□ 1.56
ITSN1-230ENST00000488166 SEPT12Q8IYM1 358 aa24.82■■□□□ 1.56
ITSN1-230ENST00000488166 NGDNQ8NEJ9 315 aaKnown RBP24.81■■□□□ 1.56
ITSN1-230ENST00000488166 PRR36Q9H6K5 1346 aa24.81■■□□□ 1.56
ITSN1-230ENST00000488166 A0A0G2JS52 829 aa24.8■■□□□ 1.56
ITSN1-230ENST00000488166 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
ITSN1-230ENST00000488166 MYT1Q01538 1121 aa24.8■■□□□ 1.56
ITSN1-230ENST00000488166 NRAPQ86VF7 1730 aa24.8■■□□□ 1.56
ITSN1-230ENST00000488166 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
ITSN1-230ENST00000488166 HRCP23327 699 aa24.79■■□□□ 1.56
ITSN1-230ENST00000488166 COL14A1Q05707 1796 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms