RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ARHGEF28Q8N1W1 1705 aaKnown RBP34.33■■■■□ 3.09
RHBDD3-205ENST00000488106 FMN2Q9NZ56 1722 aa34.33■■■■□ 3.09
RHBDD3-205ENST00000488106 DLC1Q96QB1 1528 aa34.31■■■■□ 3.08
RHBDD3-205ENST00000488106 RGPD8O14715 1765 aaPredicted RBP34.31■■■■□ 3.08
RHBDD3-205ENST00000488106 NEUROD1Q13562 356 aa34.29■■■■□ 3.08
RHBDD3-205ENST00000488106 BRINP3Q76B58 766 aa34.28■■■■□ 3.08
RHBDD3-205ENST00000488106 C1orf167Q5SNV9 1468 aa34.27■■■■□ 3.08
RHBDD3-205ENST00000488106 SHPRHQ149N8 1683 aa34.22■■■■□ 3.07
RHBDD3-205ENST00000488106 SAFB2Q14151 953 aaKnown RBP eCLIP34.21■■■■□ 3.07
RHBDD3-205ENST00000488106 L3MBTL2Q969R5 705 aa34.21■■■■□ 3.07
RHBDD3-205ENST00000488106 PRAM1Q96QH2 718 aa34.21■■■■□ 3.07
RHBDD3-205ENST00000488106 TRPM1Q7Z4N2 1603 aa34.21■■■■□ 3.07
RHBDD3-205ENST00000488106 TRAK1Q9UPV9 953 aa34.2■■■■□ 3.07
RHBDD3-205ENST00000488106 SIRT1Q96EB6 747 aa34.19■■■■□ 3.06
RHBDD3-205ENST00000488106 ADGRB2O60241 1585 aa34.19■■■■□ 3.06
RHBDD3-205ENST00000488106 ILDR2Q71H61 639 aa34.17■■■■□ 3.06
RHBDD3-205ENST00000488106 POGKQ9P215 609 aa34.17■■■■□ 3.06
RHBDD3-205ENST00000488106 NUTM2FA1L443 756 aa34.13■■■■□ 3.05
RHBDD3-205ENST00000488106 ORAI2Q96SN7 254 aa34.13■■■■□ 3.05
RHBDD3-205ENST00000488106 PCGF6Q9BYE7 350 aa34.13■■■■□ 3.05
RHBDD3-205ENST00000488106 KIF1AQ12756 1690 aa34.12■■■■□ 3.05
RHBDD3-205ENST00000488106 JCADQ9P266 1359 aa34.12■■■■□ 3.05
RHBDD3-205ENST00000488106 DDX17Q92841 729 aaKnown RBP34.12■■■■□ 3.05
RHBDD3-205ENST00000488106 USP32Q8NFA0 1604 aa34.1■■■■□ 3.05
RHBDD3-205ENST00000488106 NBPF1Q3BBV0 1214 aa34.08■■■■□ 3.05
RHBDD3-205ENST00000488106 QRICH2Q9H0J4 1663 aa34.07■■■■□ 3.04
RHBDD3-205ENST00000488106 ESCO1Q5FWF5 840 aa34.07■■■■□ 3.04
RHBDD3-205ENST00000488106 MINK1Q8N4C8 1332 aaPredicted RBP34.05■■■■□ 3.04
RHBDD3-205ENST00000488106 TONSLQ96HA7 1378 aa34.05■■■■□ 3.04
RHBDD3-205ENST00000488106 HIRIP3Q9BW71 556 aaPredicted RBP34.04■■■■□ 3.04
RHBDD3-205ENST00000488106 ITSN1Q15811 1721 aa34.02■■■■□ 3.04
RHBDD3-205ENST00000488106 PHF23Q9BUL5 403 aaPredicted RBP34.01■■■■□ 3.03
RHBDD3-205ENST00000488106 TULP4Q9NRJ4 1543 aa33.98■■■■□ 3.03
RHBDD3-205ENST00000488106 LRP6O75581 1613 aa33.97■■■■□ 3.03
RHBDD3-205ENST00000488106 PXDNQ92626 1479 aa33.97■■■■□ 3.03
RHBDD3-205ENST00000488106 ANKARQ7Z5J8 1434 aa33.96■■■■□ 3.03
RHBDD3-205ENST00000488106 ROCK2O75116 1388 aaKnown RBP33.95■■■■□ 3.02
RHBDD3-205ENST00000488106 LRRC59Q96AG4 307 aaKnown RBP33.94■■■■□ 3.02
RHBDD3-205ENST00000488106 SPATA31A6Q5VVP1 1343 aa33.94■■■■□ 3.02
RHBDD3-205ENST00000488106 NPHP3Q7Z494 1330 aa33.94■■■■□ 3.02
RHBDD3-205ENST00000488106 SOS2Q07890 1332 aaPredicted RBP33.93■■■■□ 3.02
RHBDD3-205ENST00000488106 FOXO3O43524 673 aa33.92■■■■□ 3.02
RHBDD3-205ENST00000488106 EIF3AQ14152 1382 aaKnown RBP33.92■■■■□ 3.02
RHBDD3-205ENST00000488106 PNPLA6Q8IY17 1366 aa33.92■■■■□ 3.02
RHBDD3-205ENST00000488106 COL22A1Q8NFW1 1626 aaPredicted RBP33.91■■■■□ 3.02
RHBDD3-205ENST00000488106 XPCQ01831 940 aaPredicted RBP33.91■■■■□ 3.02
RHBDD3-205ENST00000488106 NBPF8Q3BBV2 869 aa33.91■■■■□ 3.02
RHBDD3-205ENST00000488106 TOPAZ1Q8N9V7 1692 aa33.9■■■■□ 3.02
RHBDD3-205ENST00000488106 WASLO00401 505 aaPredicted RBP33.89■■■■□ 3.02
RHBDD3-205ENST00000488106 PHF8Q9UPP1 1060 aa33.87■■■■□ 3.01
RHBDD3-205ENST00000488106 RALGAPBQ86X10 1494 aa33.87■■■■□ 3.01
RHBDD3-205ENST00000488106 CENPJQ9HC77 1338 aaPredicted RBP33.86■■■■□ 3.01
RHBDD3-205ENST00000488106 NUTM2BA6NNL0 878 aaPredicted RBP33.86■■■■□ 3.01
RHBDD3-205ENST00000488106 NUTM2EB1AL46 878 aaPredicted RBP33.86■■■■□ 3.01
RHBDD3-205ENST00000488106 NUTM2AQ8IVF1 878 aaPredicted RBP33.86■■■■□ 3.01
RHBDD3-205ENST00000488106 PRR36Q9H6K5 1346 aa33.85■■■■□ 3.01
RHBDD3-205ENST00000488106 ATP7BP35670 1465 aa33.85■■■■□ 3.01
RHBDD3-205ENST00000488106 MARF1Q9Y4F3 1742 aaKnown RBP33.84■■■■□ 3.01
RHBDD3-205ENST00000488106 MEX3CQ5U5Q3 659 aaKnown RBP33.84■■■■□ 3.01
RHBDD3-205ENST00000488106 TRPM3Q9HCF6 1732 aaPredicted RBP33.83■■■■□ 3.01
RHBDD3-205ENST00000488106 PMFBP1Q8TBY8 1022 aa33.81■■■■□ 3
RHBDD3-205ENST00000488106 GPRASP1Q5JY77 1395 aa33.8■■■■□ 3
RHBDD3-205ENST00000488106 CDK19Q9BWU1 502 aa33.78■■■■□ 3
RHBDD3-205ENST00000488106 ABCA3Q99758 1704 aa33.78■■■■□ 3
RHBDD3-205ENST00000488106 SOCS7O14512 581 aa33.77■■■■□ 3
RHBDD3-205ENST00000488106 RGS17Q9UGC6 210 aaPredicted RBP33.77■■■■□ 3
RHBDD3-205ENST00000488106 KRT28Q7Z3Y7 464 aa33.76■■■□□ 2.99
RHBDD3-205ENST00000488106 ALS2Q96Q42 1657 aa33.74■■■□□ 2.99
RHBDD3-205ENST00000488106 NUDT16Q96DE0 195 aaKnown RBP33.74■■■□□ 2.99
RHBDD3-205ENST00000488106 TNS3Q68CZ2 1445 aa33.73■■■□□ 2.99
RHBDD3-205ENST00000488106 CARD11Q9BXL7 1154 aa33.73■■■□□ 2.99
RHBDD3-205ENST00000488106 CLSPNQ9HAW4 1339 aa33.73■■■□□ 2.99
RHBDD3-205ENST00000488106 PSME1Q06323 249 aa33.71■■■□□ 2.99
RHBDD3-205ENST00000488106 SPATA31A3Q5VYP0 1347 aa33.71■■■□□ 2.99
RHBDD3-205ENST00000488106 SRPK2P78362 688 aaKnown RBP33.69■■■□□ 2.98
RHBDD3-205ENST00000488106 CCER1Q8TC90 406 aaPredicted RBP33.69■■■□□ 2.98
RHBDD3-205ENST00000488106 ADAMTS2O95450 1211 aa33.67■■■□□ 2.98
RHBDD3-205ENST00000488106 NGDNQ8NEJ9 315 aaKnown RBP33.67■■■□□ 2.98
RHBDD3-205ENST00000488106 SBNO1A3KN83 1393 aa33.67■■■□□ 2.98
RHBDD3-205ENST00000488106 CABP2Q9NPB3 220 aa33.65■■■□□ 2.98
RHBDD3-205ENST00000488106 C8orf37Q96NL8 207 aa33.64■■■□□ 2.98
RHBDD3-205ENST00000488106 CRYBG1Q9Y4K1 1723 aa33.63■■■□□ 2.97
RHBDD3-205ENST00000488106 LMOD2Q6P5Q4 547 aa33.63■■■□□ 2.97
RHBDD3-205ENST00000488106 POTEAQ6S8J7 498 aa33.63■■■□□ 2.97
RHBDD3-205ENST00000488106 PPIP5K1Q6PFW1 1433 aa33.62■■■□□ 2.97
RHBDD3-205ENST00000488106 EVC2Q86UK5 1308 aa33.61■■■□□ 2.97
RHBDD3-205ENST00000488106 CCDC61Q9Y6R9 512 aa33.61■■■□□ 2.97
RHBDD3-205ENST00000488106 AFF2P51816 1311 aa33.6■■■□□ 2.97
RHBDD3-205ENST00000488106 PLEKHG5O94827 1062 aa33.6■■■□□ 2.97
RHBDD3-205ENST00000488106 AKAP12Q02952 1782 aa33.6■■■□□ 2.97
RHBDD3-205ENST00000488106 ARHGEF10O15013 1369 aa33.6■■■□□ 2.97
RHBDD3-205ENST00000488106 POLR3AO14802 1390 aaPredicted RBP33.58■■■□□ 2.97
RHBDD3-205ENST00000488106 ACEP12821 1306 aa33.56■■■□□ 2.96
RHBDD3-205ENST00000488106 ZNF772Q68DY9 489 aaPredicted RBP33.56■■■□□ 2.96
RHBDD3-205ENST00000488106 PLCH1Q4KWH8 1693 aa33.55■■■□□ 2.96
RHBDD3-205ENST00000488106 PAK3O75914 559 aaPredicted RBP33.55■■■□□ 2.96
RHBDD3-205ENST00000488106 SBNO2Q9Y2G9 1366 aa33.55■■■□□ 2.96
RHBDD3-205ENST00000488106 PHRF1Q9P1Y6 1649 aaKnown RBP33.54■■■□□ 2.96
RHBDD3-205ENST00000488106 NGLY1Q96IV0 654 aa33.54■■■□□ 2.96
RHBDD3-205ENST00000488106 CABLES1Q8TDN4 633 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms