RNA–Protein interactions for RNA: ENST00000487791.1

HBA1-204, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 1 (best)

Gene HBA1, Length 410 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-204ENST00000487791 XIRP1Q702N8 1843 aaKnown RBP32.48■■■□□ 2.79
HBA1-204ENST00000487791 DCCP43146 1447 aa32.47■■■□□ 2.79
HBA1-204ENST00000487791 SAFB2Q14151 953 aaKnown RBP eCLIP32.44■■■□□ 2.78
HBA1-204ENST00000487791 CENPJQ9HC77 1338 aaPredicted RBP32.44■■■□□ 2.78
HBA1-204ENST00000487791 ARHGEF28Q8N1W1 1705 aaKnown RBP32.43■■■□□ 2.78
HBA1-204ENST00000487791 SLC24A1O60721 1099 aa32.41■■■□□ 2.78
HBA1-204ENST00000487791 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
HBA1-204ENST00000487791 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.4■■■□□ 2.78
HBA1-204ENST00000487791 ZEB1P37275 1124 aaPredicted RBP32.38■■■□□ 2.77
HBA1-204ENST00000487791 NALCNQ8IZF0 1738 aa32.37■■■□□ 2.77
HBA1-204ENST00000487791 FBXO41Q8TF61 875 aa32.36■■■□□ 2.77
HBA1-204ENST00000487791 SLAIN2Q9P270 581 aa32.36■■■□□ 2.77
HBA1-204ENST00000487791 MINK1Q8N4C8 1332 aaPredicted RBP32.35■■■□□ 2.77
HBA1-204ENST00000487791 SCAF1Q9H7N4 1312 aaKnown RBP32.34■■■□□ 2.77
HBA1-204ENST00000487791 CDC42BPGQ6DT37 1551 aa32.34■■■□□ 2.77
HBA1-204ENST00000487791 PIP4K2BP78356 416 aa32.3■■■□□ 2.76
HBA1-204ENST00000487791 USP47Q96K76 1375 aa32.3■■■□□ 2.76
HBA1-204ENST00000487791 ADGRB2O60241 1585 aa32.29■■■□□ 2.76
HBA1-204ENST00000487791 HIRIP3Q9BW71 556 aaPredicted RBP32.29■■■□□ 2.76
HBA1-204ENST00000487791 WASLO00401 505 aaPredicted RBP32.28■■■□□ 2.76
HBA1-204ENST00000487791 QRICH2Q9H0J4 1663 aa32.27■■■□□ 2.76
HBA1-204ENST00000487791 EVC2Q86UK5 1308 aa32.26■■■□□ 2.76
HBA1-204ENST00000487791 SBNO2Q9Y2G9 1366 aa32.26■■■□□ 2.75
HBA1-204ENST00000487791 EIF4G2P78344 907 aaKnown RBP eCLIP32.25■■■□□ 2.75
HBA1-204ENST00000487791 MST1RQ04912 1400 aa32.24■■■□□ 2.75
HBA1-204ENST00000487791 ST20-MTHFSA0A0A6YYL1 179 aa32.23■■■□□ 2.75
HBA1-204ENST00000487791 SRPK2P78362 688 aaKnown RBP32.21■■■□□ 2.75
HBA1-204ENST00000487791 CDK19Q9BWU1 502 aa32.21■■■□□ 2.75
HBA1-204ENST00000487791 ANKARQ7Z5J8 1434 aa32.2■■■□□ 2.75
HBA1-204ENST00000487791 C1orf167Q5SNV9 1468 aa32.2■■■□□ 2.75
HBA1-204ENST00000487791 FMN2Q9NZ56 1722 aa32.2■■■□□ 2.74
HBA1-204ENST00000487791 ESCO1Q5FWF5 840 aa32.18■■■□□ 2.74
HBA1-204ENST00000487791 NUTM2FA1L443 756 aa32.17■■■□□ 2.74
HBA1-204ENST00000487791 TULP4Q9NRJ4 1543 aa32.16■■■□□ 2.74
HBA1-204ENST00000487791 TMF1P82094 1093 aa32.15■■■□□ 2.74
HBA1-204ENST00000487791 CDCA8Q53HL2 280 aa32.15■■■□□ 2.74
HBA1-204ENST00000487791 ROBO1Q9Y6N7 1651 aa32.12■■■□□ 2.73
HBA1-204ENST00000487791 BRINP3Q76B58 766 aa32.12■■■□□ 2.73
HBA1-204ENST00000487791 NUDT16Q96DE0 195 aaKnown RBP32.12■■■□□ 2.73
HBA1-204ENST00000487791 CCDC61Q9Y6R9 512 aa32.11■■■□□ 2.73
HBA1-204ENST00000487791 PUS7Q96PZ0 661 aaKnown RBP32.1■■■□□ 2.73
HBA1-204ENST00000487791 PHF8Q9UPP1 1060 aa32.09■■■□□ 2.73
HBA1-204ENST00000487791 HSPA5P11021 654 aaKnown RBP32.08■■■□□ 2.73
HBA1-204ENST00000487791 TESK2Q96S53 571 aa32.08■■■□□ 2.73
HBA1-204ENST00000487791 ORAI2Q96SN7 254 aa32.08■■■□□ 2.73
HBA1-204ENST00000487791 CABP2Q9NPB3 220 aa32.08■■■□□ 2.73
HBA1-204ENST00000487791 ATAD2Q6PL18 1390 aa32.07■■■□□ 2.73
HBA1-204ENST00000487791 ITSN1Q15811 1721 aa32.06■■■□□ 2.72
HBA1-204ENST00000487791 NPHP3Q7Z494 1330 aa32.06■■■□□ 2.72
HBA1-204ENST00000487791 KIF1AQ12756 1690 aa32.05■■■□□ 2.72
HBA1-204ENST00000487791 ATP7BP35670 1465 aa32.03■■■□□ 2.72
HBA1-204ENST00000487791 PRR36Q9H6K5 1346 aa32.01■■■□□ 2.72
HBA1-204ENST00000487791 NGDNQ8NEJ9 315 aaKnown RBP32.01■■■□□ 2.71
HBA1-204ENST00000487791 USP32Q8NFA0 1604 aa32■■■□□ 2.71
HBA1-204ENST00000487791 RGPD8O14715 1765 aaPredicted RBP31.99■■■□□ 2.71
HBA1-204ENST00000487791 PSME1Q06323 249 aa31.99■■■□□ 2.71
HBA1-204ENST00000487791 FOXO3O43524 673 aa31.98■■■□□ 2.71
HBA1-204ENST00000487791 PMFBP1Q8TBY8 1022 aa31.98■■■□□ 2.71
HBA1-204ENST00000487791 AHDC1Q5TGY3 1603 aaPredicted RBP31.97■■■□□ 2.71
HBA1-204ENST00000487791 PLEKHG3A1L390 1219 aa31.97■■■□□ 2.71
HBA1-204ENST00000487791 ILDR1Q86SU0 546 aaPredicted RBP31.97■■■□□ 2.71
HBA1-204ENST00000487791 PPIP5K1Q6PFW1 1433 aa31.97■■■□□ 2.71
HBA1-204ENST00000487791 HSPA1LP34931 641 aa31.96■■■□□ 2.71
HBA1-204ENST00000487791 PHLPP1O60346 1717 aa31.95■■■□□ 2.71
HBA1-204ENST00000487791 NINLQ9Y2I6 1382 aa31.94■■■□□ 2.7
HBA1-204ENST00000487791 LRRC59Q96AG4 307 aaKnown RBP31.94■■■□□ 2.7
HBA1-204ENST00000487791 NHSL1Q5SYE7 1610 aa31.93■■■□□ 2.7
HBA1-204ENST00000487791 TMC1Q8TDI8 760 aa31.93■■■□□ 2.7
HBA1-204ENST00000487791 CABP1Q9NZU7 370 aa31.93■■■□□ 2.7
HBA1-204ENST00000487791 KRT28Q7Z3Y7 464 aa31.91■■■□□ 2.7
HBA1-204ENST00000487791 ZNF692Q9BU19 519 aaPredicted RBP31.91■■■□□ 2.7
HBA1-204ENST00000487791 TOPAZ1Q8N9V7 1692 aa31.91■■■□□ 2.7
HBA1-204ENST00000487791 DISP3Q9P2K9 1392 aa31.91■■■□□ 2.7
HBA1-204ENST00000487791 TERF2IPQ9NYB0 399 aa31.9■■■□□ 2.7
HBA1-204ENST00000487791 SOS2Q07890 1332 aaPredicted RBP31.9■■■□□ 2.7
HBA1-204ENST00000487791 ACEP12821 1306 aa31.89■■■□□ 2.7
HBA1-204ENST00000487791 POLR3AO14802 1390 aaPredicted RBP31.88■■■□□ 2.69
HBA1-204ENST00000487791 HDGFL2Q7Z4V5 671 aaPredicted RBP31.87■■■□□ 2.69
HBA1-204ENST00000487791 DDX17Q92841 729 aaKnown RBP31.86■■■□□ 2.69
HBA1-204ENST00000487791 BRD4O60885 1362 aaPredicted RBP31.85■■■□□ 2.69
HBA1-204ENST00000487791 POLR3GLQ9BT43 218 aa31.85■■■□□ 2.69
HBA1-204ENST00000487791 SBNO1A3KN83 1393 aa31.82■■■□□ 2.69
HBA1-204ENST00000487791 JCADQ9P266 1359 aa31.82■■■□□ 2.69
HBA1-204ENST00000487791 XPCQ01831 940 aaPredicted RBP31.82■■■□□ 2.68
HBA1-204ENST00000487791 COL16A1Q07092 1604 aaPredicted RBP31.82■■■□□ 2.68
HBA1-204ENST00000487791 PXDNQ92626 1479 aa31.81■■■□□ 2.68
HBA1-204ENST00000487791 PAK3O75914 559 aaPredicted RBP31.8■■■□□ 2.68
HBA1-204ENST00000487791 SLC12A5Q9H2X9 1139 aa31.8■■■□□ 2.68
HBA1-204ENST00000487791 LMOD2Q6P5Q4 547 aa31.77■■■□□ 2.68
HBA1-204ENST00000487791 ARHGEF10O15013 1369 aa31.77■■■□□ 2.68
HBA1-204ENST00000487791 KTN1Q86UP2 1357 aaKnown RBP31.77■■■□□ 2.68
HBA1-204ENST00000487791 SPATA31A3Q5VYP0 1347 aa31.75■■■□□ 2.67
HBA1-204ENST00000487791 TNS3Q68CZ2 1445 aa31.75■■■□□ 2.67
HBA1-204ENST00000487791 USP6P35125 1406 aa31.74■■■□□ 2.67
HBA1-204ENST00000487791 CPSF1Q10570 1443 aaKnown RBP31.74■■■□□ 2.67
HBA1-204ENST00000487791 SPATA31A6Q5VVP1 1343 aa31.73■■■□□ 2.67
HBA1-204ENST00000487791 ANKRD36BQ8N2N9 1353 aa31.71■■■□□ 2.67
HBA1-204ENST00000487791 KIF7Q2M1P5 1343 aa31.7■■■□□ 2.66
HBA1-204ENST00000487791 TTC21AQ8NDW8 1320 aa31.7■■■□□ 2.66
HBA1-204ENST00000487791 AKAP12Q02952 1782 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms