RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 WWC1Q8IX03 1113 aa14.82□□□□□ -0.04
TRA2B-214ENST00000487615 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
TRA2B-214ENST00000487615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRA2B-214ENST00000487615 TXNDC2Q86VQ3 553 aa14.82□□□□□ -0.04
TRA2B-214ENST00000487615 SLC4A10Q6U841 1118 aa14.82□□□□□ -0.04
TRA2B-214ENST00000487615 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
TRA2B-214ENST00000487615 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
TRA2B-214ENST00000487615 COL17A1Q9UMD9 1497 aaPredicted RBP14.81□□□□□ -0.04
TRA2B-214ENST00000487615 NINLQ9Y2I6 1382 aa14.81□□□□□ -0.04
TRA2B-214ENST00000487615 EXOSC9Q06265 439 aaKnown RBP14.8□□□□□ -0.04
TRA2B-214ENST00000487615 SLC4A3P48751 1232 aa14.8□□□□□ -0.04
TRA2B-214ENST00000487615 API5Q9BZZ5 524 aaKnown RBP14.8□□□□□ -0.04
TRA2B-214ENST00000487615 USP35Q9P2H5 1018 aa14.8□□□□□ -0.04
TRA2B-214ENST00000487615 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
TRA2B-214ENST00000487615 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
TRA2B-214ENST00000487615 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
TRA2B-214ENST00000487615 ANKRD45Q5TZF3 282 aa14.79□□□□□ -0.04
TRA2B-214ENST00000487615 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
TRA2B-214ENST00000487615 TSR2Q969E8 191 aaKnown RBP14.78□□□□□ -0.04
TRA2B-214ENST00000487615 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
TRA2B-214ENST00000487615 DUSP27Q5VZP5 1158 aa14.78□□□□□ -0.04
TRA2B-214ENST00000487615 BACH2Q9BYV9 841 aa14.78□□□□□ -0.04
TRA2B-214ENST00000487615 FBXO31Q5XUX0 539 aaPredicted RBP14.78□□□□□ -0.04
TRA2B-214ENST00000487615 CT47B1P0C2W7 299 aaPredicted RBP14.78□□□□□ -0.04
TRA2B-214ENST00000487615 ATP7AQ04656 1500 aa14.77□□□□□ -0.04
TRA2B-214ENST00000487615 MCCP23508 829 aa14.77□□□□□ -0.04
TRA2B-214ENST00000487615 A0A0G2JS52 829 aa14.77□□□□□ -0.05
TRA2B-214ENST00000487615 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
TRA2B-214ENST00000487615 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
TRA2B-214ENST00000487615 C20orf194Q5TEA3 1177 aa14.75□□□□□ -0.05
TRA2B-214ENST00000487615 PREX2Q70Z35 1606 aa14.75□□□□□ -0.05
TRA2B-214ENST00000487615 TRIM44Q96DX7 344 aaPredicted RBP14.75□□□□□ -0.05
TRA2B-214ENST00000487615 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
TRA2B-214ENST00000487615 ADCY10Q96PN6 1610 aa14.74□□□□□ -0.05
TRA2B-214ENST00000487615 NSD2O96028 1365 aa14.74□□□□□ -0.05
TRA2B-214ENST00000487615 LRPPRCP42704 1394 aaKnown RBP14.74□□□□□ -0.05
TRA2B-214ENST00000487615 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
TRA2B-214ENST00000487615 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 TTC37Q6PGP7 1564 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 CDC42BPAQ5VT25 1732 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 FCHSD2O94868 740 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 CSB-PGBD3P0DP91 1061 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
TRA2B-214ENST00000487615 CHD1O14646 1710 aa14.72□□□□□ -0.05
TRA2B-214ENST00000487615 KCNJ4P48050 445 aa14.71□□□□□ -0.05
TRA2B-214ENST00000487615 GBP4Q96PP9 640 aa14.71□□□□□ -0.05
TRA2B-214ENST00000487615 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
TRA2B-214ENST00000487615 KDM5CP41229 1560 aa14.71□□□□□ -0.05
TRA2B-214ENST00000487615 NLRP6P59044 892 aa14.7□□□□□ -0.06
TRA2B-214ENST00000487615 NUDT16Q96DE0 195 aaKnown RBP14.7□□□□□ -0.06
TRA2B-214ENST00000487615 PDZRN3Q9UPQ7 1066 aa14.7□□□□□ -0.06
TRA2B-214ENST00000487615 MVPQ14764 893 aaKnown RBP14.7□□□□□ -0.06
TRA2B-214ENST00000487615 L1TD1Q5T7N2 865 aaKnown RBP14.7□□□□□ -0.06
TRA2B-214ENST00000487615 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
TRA2B-214ENST00000487615 PIK3C2GO75747 1445 aa14.7□□□□□ -0.06
TRA2B-214ENST00000487615 HDAC5Q9UQL6 1122 aa14.7□□□□□ -0.06
TRA2B-214ENST00000487615 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
TRA2B-214ENST00000487615 RARSP54136 660 aaKnown RBP14.69□□□□□ -0.06
TRA2B-214ENST00000487615 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
TRA2B-214ENST00000487615 TSPYL4Q9UJ04 414 aa14.69□□□□□ -0.06
TRA2B-214ENST00000487615 KDM5DQ9BY66 1539 aa14.69□□□□□ -0.06
TRA2B-214ENST00000487615 THEMISQ8N1K5 641 aaPredicted RBP14.69□□□□□ -0.06
TRA2B-214ENST00000487615 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
TRA2B-214ENST00000487615 TEFQ10587 303 aa14.68□□□□□ -0.06
TRA2B-214ENST00000487615 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
TRA2B-214ENST00000487615 SULT6B1Q6IMI4 303 aa14.68□□□□□ -0.06
TRA2B-214ENST00000487615 ANKRD36BQ8N2N9 1353 aa14.68□□□□□ -0.06
TRA2B-214ENST00000487615 PSME1Q06323 249 aa14.68□□□□□ -0.06
TRA2B-214ENST00000487615 ABCC11Q96J66 1382 aa14.67□□□□□ -0.06
TRA2B-214ENST00000487615 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
TRA2B-214ENST00000487615 CARD14Q9BXL6 1004 aa14.67□□□□□ -0.06
TRA2B-214ENST00000487615 RRS1Q15050 365 aaKnown RBP14.67□□□□□ -0.06
TRA2B-214ENST00000487615 PUS7Q96PZ0 661 aaKnown RBP14.67□□□□□ -0.06
TRA2B-214ENST00000487615 POLR3AO14802 1390 aaPredicted RBP14.67□□□□□ -0.06
TRA2B-214ENST00000487615 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
TRA2B-214ENST00000487615 NPC1L1Q9UHC9 1359 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 ABCC1P33527 1531 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 C1orf141Q5JVX7 400 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 POGZQ7Z3K3 1410 aa14.66□□□□□ -0.06
TRA2B-214ENST00000487615 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
TRA2B-214ENST00000487615 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
TRA2B-214ENST00000487615 PTMSP20962 102 aa14.65□□□□□ -0.06
TRA2B-214ENST00000487615 FKBP5Q13451 457 aaPredicted RBP14.65□□□□□ -0.06
TRA2B-214ENST00000487615 MSH5O43196 834 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 ATP10AO60312 1499 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 GZF1Q9H116 711 aaPredicted RBP14.64□□□□□ -0.07
TRA2B-214ENST00000487615 PLEKHH1Q9ULM0 1364 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 NECTIN2Q92692 538 aa14.64□□□□□ -0.07
TRA2B-214ENST00000487615 ABTB2Q8N961 1025 aa14.63□□□□□ -0.07
TRA2B-214ENST00000487615 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
TRA2B-214ENST00000487615 SKAP1Q86WV1 359 aa14.63□□□□□ -0.07
TRA2B-214ENST00000487615 NME9Q86XW9 330 aa14.63□□□□□ -0.07
TRA2B-214ENST00000487615 ST18O60284 1047 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 EIF2S2P20042 333 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms