RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 POGKQ9P215 609 aa27.96■■■□□ 2.07
SEC22A-208ENST00000487572 ILDR1Q86SU0 546 aaPredicted RBP27.95■■■□□ 2.06
SEC22A-208ENST00000487572 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
SEC22A-208ENST00000487572 TIMELESSQ9UNS1 1208 aa27.94■■■□□ 2.06
SEC22A-208ENST00000487572 CADPS2Q86UW7 1296 aa27.92■■■□□ 2.06
SEC22A-208ENST00000487572 DCCP43146 1447 aa27.91■■■□□ 2.06
SEC22A-208ENST00000487572 ARHGEF28Q8N1W1 1705 aaKnown RBP27.89■■■□□ 2.06
SEC22A-208ENST00000487572 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
SEC22A-208ENST00000487572 SLAIN2Q9P270 581 aa27.89■■■□□ 2.06
SEC22A-208ENST00000487572 CARD11Q9BXL7 1154 aa27.85■■■□□ 2.05
SEC22A-208ENST00000487572 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
SEC22A-208ENST00000487572 CDC42BPGQ6DT37 1551 aa27.84■■■□□ 2.05
SEC22A-208ENST00000487572 GPRASP1Q5JY77 1395 aa27.84■■■□□ 2.05
SEC22A-208ENST00000487572 HIRIP3Q9BW71 556 aaPredicted RBP27.83■■■□□ 2.05
SEC22A-208ENST00000487572 MST1RQ04912 1400 aa27.83■■■□□ 2.05
SEC22A-208ENST00000487572 ROBO1Q9Y6N7 1651 aa27.8■■■□□ 2.04
SEC22A-208ENST00000487572 CENPJQ9HC77 1338 aaPredicted RBP27.79■■■□□ 2.04
SEC22A-208ENST00000487572 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
SEC22A-208ENST00000487572 EIF3AQ14152 1382 aaKnown RBP27.77■■■□□ 2.04
SEC22A-208ENST00000487572 C1orf167Q5SNV9 1468 aa27.76■■■□□ 2.04
SEC22A-208ENST00000487572 ADGRB2O60241 1585 aa27.76■■■□□ 2.03
SEC22A-208ENST00000487572 FMN2Q9NZ56 1722 aa27.74■■■□□ 2.03
SEC22A-208ENST00000487572 QRICH2Q9H0J4 1663 aa27.73■■■□□ 2.03
SEC22A-208ENST00000487572 HSPA1LP34931 641 aa27.73■■■□□ 2.03
SEC22A-208ENST00000487572 BRINP3Q76B58 766 aa27.73■■■□□ 2.03
SEC22A-208ENST00000487572 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
SEC22A-208ENST00000487572 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
SEC22A-208ENST00000487572 ESCO1Q5FWF5 840 aa27.69■■■□□ 2.02
SEC22A-208ENST00000487572 CDK19Q9BWU1 502 aa27.66■■■□□ 2.02
SEC22A-208ENST00000487572 USP47Q96K76 1375 aa27.64■■■□□ 2.02
SEC22A-208ENST00000487572 TULP4Q9NRJ4 1543 aa27.64■■■□□ 2.02
SEC22A-208ENST00000487572 DDX17Q92841 729 aaKnown RBP27.64■■■□□ 2.02
SEC22A-208ENST00000487572 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
SEC22A-208ENST00000487572 USP32Q8NFA0 1604 aa27.63■■■□□ 2.01
SEC22A-208ENST00000487572 PHLPP1O60346 1717 aa27.62■■■□□ 2.01
SEC22A-208ENST00000487572 PRR36Q9H6K5 1346 aa27.62■■■□□ 2.01
SEC22A-208ENST00000487572 SRPK2P78362 688 aaKnown RBP27.61■■■□□ 2.01
SEC22A-208ENST00000487572 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
SEC22A-208ENST00000487572 AHDC1Q5TGY3 1603 aaPredicted RBP27.6■■■□□ 2.01
SEC22A-208ENST00000487572 ST20-MTHFSA0A0A6YYL1 179 aa27.6■■■□□ 2.01
SEC22A-208ENST00000487572 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
SEC22A-208ENST00000487572 CABP2Q9NPB3 220 aa27.59■■■□□ 2.01
SEC22A-208ENST00000487572 EVC2Q86UK5 1308 aa27.59■■■□□ 2.01
SEC22A-208ENST00000487572 PHF8Q9UPP1 1060 aa27.58■■■□□ 2.01
SEC22A-208ENST00000487572 ATP7BP35670 1465 aa27.57■■■□□ 2
SEC22A-208ENST00000487572 NHSL1Q5SYE7 1610 aa27.57■■■□□ 2
SEC22A-208ENST00000487572 FOXO3O43524 673 aa27.56■■■□□ 2
SEC22A-208ENST00000487572 PMFBP1Q8TBY8 1022 aa27.56■■■□□ 2
SEC22A-208ENST00000487572 SBNO2Q9Y2G9 1366 aa27.56■■■□□ 2
SEC22A-208ENST00000487572 COL16A1Q07092 1604 aaPredicted RBP27.55■■■□□ 2
SEC22A-208ENST00000487572 KIF1AQ12756 1690 aa27.55■■■□□ 2
SEC22A-208ENST00000487572 XPCQ01831 940 aaPredicted RBP27.54■■■□□ 2
SEC22A-208ENST00000487572 NPHP3Q7Z494 1330 aa27.53■■■□□ 2
SEC22A-208ENST00000487572 TESK2Q96S53 571 aa27.52■■■□□ 2
SEC22A-208ENST00000487572 ITSN1Q15811 1721 aa27.5■■□□□ 1.99
SEC22A-208ENST00000487572 CCDC61Q9Y6R9 512 aa27.5■■□□□ 1.99
SEC22A-208ENST00000487572 TOPAZ1Q8N9V7 1692 aa27.49■■□□□ 1.99
SEC22A-208ENST00000487572 EIF4G2P78344 907 aaKnown RBP eCLIP27.48■■□□□ 1.99
SEC22A-208ENST00000487572 NGDNQ8NEJ9 315 aaKnown RBP27.48■■□□□ 1.99
SEC22A-208ENST00000487572 SOS2Q07890 1332 aaPredicted RBP27.47■■□□□ 1.99
SEC22A-208ENST00000487572 PXDNQ92626 1479 aa27.47■■□□□ 1.99
SEC22A-208ENST00000487572 PPIP5K1Q6PFW1 1433 aa27.47■■□□□ 1.99
SEC22A-208ENST00000487572 PSME1Q06323 249 aa27.46■■□□□ 1.99
SEC22A-208ENST00000487572 HSPA5P11021 654 aaKnown RBP27.45■■□□□ 1.98
SEC22A-208ENST00000487572 KRT28Q7Z3Y7 464 aa27.45■■□□□ 1.98
SEC22A-208ENST00000487572 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
SEC22A-208ENST00000487572 JCADQ9P266 1359 aa27.44■■□□□ 1.98
SEC22A-208ENST00000487572 CABP1Q9NZU7 370 aa27.43■■□□□ 1.98
SEC22A-208ENST00000487572 ATAD2Q6PL18 1390 aa27.43■■□□□ 1.98
SEC22A-208ENST00000487572 DISP3Q9P2K9 1392 aa27.43■■□□□ 1.98
SEC22A-208ENST00000487572 SLC24A1O60721 1099 aa27.42■■□□□ 1.98
SEC22A-208ENST00000487572 TMF1P82094 1093 aa27.42■■□□□ 1.98
SEC22A-208ENST00000487572 ACEP12821 1306 aa27.41■■□□□ 1.98
SEC22A-208ENST00000487572 PLEKHG3A1L390 1219 aa27.41■■□□□ 1.98
SEC22A-208ENST00000487572 POLR3AO14802 1390 aaPredicted RBP27.38■■□□□ 1.97
SEC22A-208ENST00000487572 PNPLA6Q8IY17 1366 aa27.37■■□□□ 1.97
SEC22A-208ENST00000487572 TMC1Q8TDI8 760 aa27.37■■□□□ 1.97
SEC22A-208ENST00000487572 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
SEC22A-208ENST00000487572 LMOD2Q6P5Q4 547 aa27.35■■□□□ 1.97
SEC22A-208ENST00000487572 SPATA31A3Q5VYP0 1347 aa27.35■■□□□ 1.97
SEC22A-208ENST00000487572 TNS3Q68CZ2 1445 aa27.34■■□□□ 1.97
SEC22A-208ENST00000487572 PAK3O75914 559 aaPredicted RBP27.34■■□□□ 1.97
SEC22A-208ENST00000487572 SBNO1A3KN83 1393 aa27.34■■□□□ 1.97
SEC22A-208ENST00000487572 PUS7Q96PZ0 661 aaKnown RBP27.33■■□□□ 1.97
SEC22A-208ENST00000487572 NUTM2BA6NNL0 878 aaPredicted RBP27.32■■□□□ 1.96
SEC22A-208ENST00000487572 NUTM2EB1AL46 878 aaPredicted RBP27.32■■□□□ 1.96
SEC22A-208ENST00000487572 CDCA8Q53HL2 280 aa27.32■■□□□ 1.96
SEC22A-208ENST00000487572 NUTM2AQ8IVF1 878 aaPredicted RBP27.32■■□□□ 1.96
SEC22A-208ENST00000487572 TRPM3Q9HCF6 1732 aaPredicted RBP27.32■■□□□ 1.96
SEC22A-208ENST00000487572 PLEKHG5O94827 1062 aa27.31■■□□□ 1.96
SEC22A-208ENST00000487572 SLC12A5Q9H2X9 1139 aa27.31■■□□□ 1.96
SEC22A-208ENST00000487572 SPATA31A6Q5VVP1 1343 aa27.31■■□□□ 1.96
SEC22A-208ENST00000487572 POLR3GLQ9BT43 218 aa27.3■■□□□ 1.96
SEC22A-208ENST00000487572 MED1Q15648 1581 aaPredicted RBP27.28■■□□□ 1.96
SEC22A-208ENST00000487572 USP6P35125 1406 aa27.26■■□□□ 1.95
SEC22A-208ENST00000487572 ARHGEF10O15013 1369 aa27.26■■□□□ 1.95
SEC22A-208ENST00000487572 LRP6O75581 1613 aa27.26■■□□□ 1.95
SEC22A-208ENST00000487572 COL22A1Q8NFW1 1626 aaPredicted RBP27.26■■□□□ 1.95
SEC22A-208ENST00000487572 CPSF1Q10570 1443 aaKnown RBP27.24■■□□□ 1.95
SEC22A-208ENST00000487572 KTN1Q86UP2 1357 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms