RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 WAPLQ7Z5K2 1190 aa24.31■■□□□ 1.48
SRRT-212ENST00000487311 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
SRRT-212ENST00000487311 STK26Q9P289 416 aa24.3■■□□□ 1.48
SRRT-212ENST00000487311 TMEM132EQ6IEE7 984 aa24.29■■□□□ 1.48
SRRT-212ENST00000487311 MPHOSPH9Q99550 1183 aa24.28■■□□□ 1.48
SRRT-212ENST00000487311 USP21Q9UK80 565 aa24.28■■□□□ 1.48
SRRT-212ENST00000487311 NUTM2FA1L443 756 aa24.27■■□□□ 1.48
SRRT-212ENST00000487311 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
SRRT-212ENST00000487311 FNBP4Q8N3X1 1017 aaPredicted RBP24.27■■□□□ 1.48
SRRT-212ENST00000487311 FOXO3O43524 673 aa24.26■■□□□ 1.47
SRRT-212ENST00000487311 SPATA31E1Q6ZUB1 1445 aa24.26■■□□□ 1.47
SRRT-212ENST00000487311 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
SRRT-212ENST00000487311 NPHP3Q7Z494 1330 aa24.23■■□□□ 1.47
SRRT-212ENST00000487311 CCDC144AA2RUR9 1427 aa24.23■■□□□ 1.47
SRRT-212ENST00000487311 TRPC5Q9UL62 973 aaPredicted RBP24.22■■□□□ 1.47
SRRT-212ENST00000487311 PXDNQ92626 1479 aa24.21■■□□□ 1.47
SRRT-212ENST00000487311 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
SRRT-212ENST00000487311 ABCC11Q96J66 1382 aa24.2■■□□□ 1.46
SRRT-212ENST00000487311 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.46
SRRT-212ENST00000487311 TECPR2O15040 1411 aa24.19■■□□□ 1.46
SRRT-212ENST00000487311 ANKRD30BQ9BXX2 1392 aa24.19■■□□□ 1.46
SRRT-212ENST00000487311 COL22A1Q8NFW1 1626 aaPredicted RBP24.19■■□□□ 1.46
SRRT-212ENST00000487311 MYOM2P54296 1465 aa24.19■■□□□ 1.46
SRRT-212ENST00000487311 ATRNO75882 1429 aa24.18■■□□□ 1.46
SRRT-212ENST00000487311 BCL9LQ86UU0 1499 aa24.17■■□□□ 1.46
SRRT-212ENST00000487311 PIK3C2GO75747 1445 aa24.16■■□□□ 1.46
SRRT-212ENST00000487311 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
SRRT-212ENST00000487311 YTHDC2Q9H6S0 1430 aaKnown RBP24.13■■□□□ 1.45
SRRT-212ENST00000487311 C14orf93Q9H972 538 aaKnown RBP24.13■■□□□ 1.45
SRRT-212ENST00000487311 CFAP70Q5T0N1 1121 aa24.12■■□□□ 1.45
SRRT-212ENST00000487311 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
SRRT-212ENST00000487311 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
SRRT-212ENST00000487311 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
SRRT-212ENST00000487311 SIRT1Q96EB6 747 aa24.1■■□□□ 1.45
SRRT-212ENST00000487311 GJD4Q96KN9 370 aaPredicted RBP24.1■■□□□ 1.45
SRRT-212ENST00000487311 KNDC1Q76NI1 1749 aa24.08■■□□□ 1.45
SRRT-212ENST00000487311 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
SRRT-212ENST00000487311 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
SRRT-212ENST00000487311 EP400Q96L91 3159 aa24.06■■□□□ 1.44
SRRT-212ENST00000487311 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
SRRT-212ENST00000487311 SAFB2Q14151 953 aaKnown RBP eCLIP24.05■■□□□ 1.44
SRRT-212ENST00000487311 RGPD8O14715 1765 aaPredicted RBP24.04■■□□□ 1.44
SRRT-212ENST00000487311 UNC5CLQ8IV45 518 aa24.04■■□□□ 1.44
SRRT-212ENST00000487311 CABLES1Q8TDN4 633 aa24.04■■□□□ 1.44
SRRT-212ENST00000487311 PHF8Q9UPP1 1060 aa24.04■■□□□ 1.44
SRRT-212ENST00000487311 NRXN1Q9ULB1 1477 aa24.03■■□□□ 1.44
SRRT-212ENST00000487311 PRAM1Q96QH2 718 aa24.03■■□□□ 1.44
SRRT-212ENST00000487311 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
SRRT-212ENST00000487311 SLIT2O94813 1529 aa24.02■■□□□ 1.44
SRRT-212ENST00000487311 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
SRRT-212ENST00000487311 PSME1Q06323 249 aa23.98■■□□□ 1.43
SRRT-212ENST00000487311 RALGAPBQ86X10 1494 aa23.98■■□□□ 1.43
SRRT-212ENST00000487311 KIF1AQ12756 1690 aa23.98■■□□□ 1.43
SRRT-212ENST00000487311 GLI3P10071 1580 aa23.97■■□□□ 1.43
SRRT-212ENST00000487311 PMFBP1Q8TBY8 1022 aa23.97■■□□□ 1.43
SRRT-212ENST00000487311 CCDC125Q86Z20 511 aa23.96■■□□□ 1.43
SRRT-212ENST00000487311 TNS3Q68CZ2 1445 aa23.95■■□□□ 1.42
SRRT-212ENST00000487311 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
SRRT-212ENST00000487311 POGKQ9P215 609 aa23.95■■□□□ 1.42
SRRT-212ENST00000487311 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.95■■□□□ 1.42
SRRT-212ENST00000487311 RAB3GAP2Q9H2M9 1393 aa23.94■■□□□ 1.42
SRRT-212ENST00000487311 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
SRRT-212ENST00000487311 USP32Q8NFA0 1604 aa23.94■■□□□ 1.42
SRRT-212ENST00000487311 SBNO1A3KN83 1393 aa23.93■■□□□ 1.42
SRRT-212ENST00000487311 FAM83GA6ND36 823 aa23.93■■□□□ 1.42
SRRT-212ENST00000487311 HAP1P54257 671 aaPredicted RBP23.93■■□□□ 1.42
SRRT-212ENST00000487311 HIRIP3Q9BW71 556 aaPredicted RBP23.93■■□□□ 1.42
SRRT-212ENST00000487311 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
SRRT-212ENST00000487311 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
SRRT-212ENST00000487311 SEPT12Q8IYM1 358 aa23.92■■□□□ 1.42
SRRT-212ENST00000487311 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
SRRT-212ENST00000487311 VPS72Q15906 364 aa23.91■■□□□ 1.42
SRRT-212ENST00000487311 ONECUT3O60422 494 aaPredicted RBP23.89■■□□□ 1.41
SRRT-212ENST00000487311 DLC1Q96QB1 1528 aa23.89■■□□□ 1.41
SRRT-212ENST00000487311 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.41
SRRT-212ENST00000487311 PRR36Q9H6K5 1346 aa23.88■■□□□ 1.41
SRRT-212ENST00000487311 ADGRB1O14514 1584 aa23.88■■□□□ 1.41
SRRT-212ENST00000487311 MINK1Q8N4C8 1332 aaPredicted RBP23.87■■□□□ 1.41
SRRT-212ENST00000487311 DEFB132Q7Z7B7 95 aa23.87■■□□□ 1.41
SRRT-212ENST00000487311 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
SRRT-212ENST00000487311 CCDC9Q9Y3X0 531 aaKnown RBP23.87■■□□□ 1.41
SRRT-212ENST00000487311 ARHGEF10O15013 1369 aa23.86■■□□□ 1.41
SRRT-212ENST00000487311 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
SRRT-212ENST00000487311 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
SRRT-212ENST00000487311 ABCA3Q99758 1704 aa23.83■■□□□ 1.41
SRRT-212ENST00000487311 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
SRRT-212ENST00000487311 WASLO00401 505 aaPredicted RBP23.82■■□□□ 1.4
SRRT-212ENST00000487311 KRT27Q7Z3Y8 459 aa23.81■■□□□ 1.4
SRRT-212ENST00000487311 BTG4Q9NY30 223 aa23.81■■□□□ 1.4
SRRT-212ENST00000487311 ADGRB2O60241 1585 aa23.81■■□□□ 1.4
SRRT-212ENST00000487311 NWD2Q9ULI1 1742 aa23.81■■□□□ 1.4
SRRT-212ENST00000487311 TRPM3Q9HCF6 1732 aaPredicted RBP23.8■■□□□ 1.4
SRRT-212ENST00000487311 FAM98CQ17RN3 349 aaKnown RBP23.78■■□□□ 1.4
SRRT-212ENST00000487311 GPRASP1Q5JY77 1395 aa23.78■■□□□ 1.4
SRRT-212ENST00000487311 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
SRRT-212ENST00000487311 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
SRRT-212ENST00000487311 TULP4Q9NRJ4 1543 aa23.75■■□□□ 1.39
SRRT-212ENST00000487311 PAK3O75914 559 aaPredicted RBP23.75■■□□□ 1.39
SRRT-212ENST00000487311 SF3B2Q13435 895 aaKnown RBP23.75■■□□□ 1.39
SRRT-212ENST00000487311 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms