RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 PLEKHH1Q9ULM0 1364 aa33■■■□□ 2.87
SRM-205ENST00000487300 DLC1Q96QB1 1528 aa33■■■□□ 2.87
SRM-205ENST00000487300 POTEAQ6S8J7 498 aa32.99■■■□□ 2.87
SRM-205ENST00000487300 COL22A1Q8NFW1 1626 aaPredicted RBP32.99■■■□□ 2.87
SRM-205ENST00000487300 PNPLA6Q8IY17 1366 aa32.98■■■□□ 2.87
SRM-205ENST00000487300 STK26Q9P289 416 aa32.98■■■□□ 2.87
SRM-205ENST00000487300 DDX17Q92841 729 aaKnown RBP32.97■■■□□ 2.87
SRM-205ENST00000487300 SIRT1Q96EB6 747 aa32.97■■■□□ 2.87
SRM-205ENST00000487300 ORAI2Q96SN7 254 aa32.97■■■□□ 2.87
SRM-205ENST00000487300 RGPD8O14715 1765 aaPredicted RBP32.96■■■□□ 2.87
SRM-205ENST00000487300 WAPLQ7Z5K2 1190 aa32.96■■■□□ 2.87
SRM-205ENST00000487300 LRRC59Q96AG4 307 aaKnown RBP32.96■■■□□ 2.87
SRM-205ENST00000487300 KIF1AQ12756 1690 aa32.96■■■□□ 2.87
SRM-205ENST00000487300 SOS2Q07890 1332 aaPredicted RBP32.96■■■□□ 2.87
SRM-205ENST00000487300 CFAP70Q5T0N1 1121 aa32.95■■■□□ 2.87
SRM-205ENST00000487300 ADGRB2O60241 1585 aa32.94■■■□□ 2.86
SRM-205ENST00000487300 DHX57Q6P158 1386 aaKnown RBP32.93■■■□□ 2.86
SRM-205ENST00000487300 PXDNQ92626 1479 aa32.93■■■□□ 2.86
SRM-205ENST00000487300 KIAA1210Q9ULL0 1709 aa32.88■■■□□ 2.85
SRM-205ENST00000487300 STAC3Q96MF2 364 aa32.87■■■□□ 2.85
SRM-205ENST00000487300 ARHGEF28Q8N1W1 1705 aaKnown RBP32.87■■■□□ 2.85
SRM-205ENST00000487300 USP32Q8NFA0 1604 aa32.86■■■□□ 2.85
SRM-205ENST00000487300 MARF1Q9Y4F3 1742 aaKnown RBP32.85■■■□□ 2.85
SRM-205ENST00000487300 MEX3CQ5U5Q3 659 aaKnown RBP32.83■■■□□ 2.85
SRM-205ENST00000487300 NPHP3Q7Z494 1330 aa32.82■■■□□ 2.84
SRM-205ENST00000487300 ESCO1Q5FWF5 840 aa32.81■■■□□ 2.84
SRM-205ENST00000487300 DCAF11Q8TEB1 546 aa32.81■■■□□ 2.84
SRM-205ENST00000487300 NUTM2BA6NNL0 878 aaPredicted RBP32.79■■■□□ 2.84
SRM-205ENST00000487300 NUTM2EB1AL46 878 aaPredicted RBP32.79■■■□□ 2.84
SRM-205ENST00000487300 ZNF772Q68DY9 489 aaPredicted RBP32.79■■■□□ 2.84
SRM-205ENST00000487300 NUTM2AQ8IVF1 878 aaPredicted RBP32.79■■■□□ 2.84
SRM-205ENST00000487300 PRAM1Q96QH2 718 aa32.77■■■□□ 2.84
SRM-205ENST00000487300 KDM2AQ9Y2K7 1162 aa32.74■■■□□ 2.83
SRM-205ENST00000487300 ANKARQ7Z5J8 1434 aa32.74■■■□□ 2.83
SRM-205ENST00000487300 NUTM2FA1L443 756 aa32.73■■■□□ 2.83
SRM-205ENST00000487300 AFF2P51816 1311 aa32.73■■■□□ 2.83
SRM-205ENST00000487300 FOXO3O43524 673 aa32.72■■■□□ 2.83
SRM-205ENST00000487300 CDK12Q9NYV4 1490 aaPredicted RBP32.72■■■□□ 2.83
SRM-205ENST00000487300 ABCA3Q99758 1704 aa32.69■■■□□ 2.82
SRM-205ENST00000487300 TULP4Q9NRJ4 1543 aa32.68■■■□□ 2.82
SRM-205ENST00000487300 TRAK1Q9UPV9 953 aa32.67■■■□□ 2.82
SRM-205ENST00000487300 ITSN1Q15811 1721 aa32.67■■■□□ 2.82
SRM-205ENST00000487300 TRPM3Q9HCF6 1732 aaPredicted RBP32.67■■■□□ 2.82
SRM-205ENST00000487300 SAFB2Q14151 953 aaKnown RBP eCLIP32.66■■■□□ 2.82
SRM-205ENST00000487300 C8orf37Q96NL8 207 aa32.65■■■□□ 2.82
SRM-205ENST00000487300 POGKQ9P215 609 aa32.65■■■□□ 2.82
SRM-205ENST00000487300 XPCQ01831 940 aaPredicted RBP32.64■■■□□ 2.82
SRM-205ENST00000487300 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.64■■■□□ 2.82
SRM-205ENST00000487300 SPATA31A3Q5VYP0 1347 aa32.62■■■□□ 2.81
SRM-205ENST00000487300 PHF8Q9UPP1 1060 aa32.62■■■□□ 2.81
SRM-205ENST00000487300 TNS3Q68CZ2 1445 aa32.6■■■□□ 2.81
SRM-205ENST00000487300 EIF3AQ14152 1382 aaKnown RBP32.6■■■□□ 2.81
SRM-205ENST00000487300 ALS2Q96Q42 1657 aa32.6■■■□□ 2.81
SRM-205ENST00000487300 ADAMTS2O95450 1211 aa32.6■■■□□ 2.81
SRM-205ENST00000487300 TOPAZ1Q8N9V7 1692 aa32.59■■■□□ 2.81
SRM-205ENST00000487300 RXRBP28702 533 aa32.57■■■□□ 2.8
SRM-205ENST00000487300 SBNO1A3KN83 1393 aa32.57■■■□□ 2.8
SRM-205ENST00000487300 ATP7BP35670 1465 aa32.56■■■□□ 2.8
SRM-205ENST00000487300 FNBP4Q8N3X1 1017 aaPredicted RBP32.56■■■□□ 2.8
SRM-205ENST00000487300 MINK1Q8N4C8 1332 aaPredicted RBP32.55■■■□□ 2.8
SRM-205ENST00000487300 PRR36Q9H6K5 1346 aa32.55■■■□□ 2.8
SRM-205ENST00000487300 KRT28Q7Z3Y7 464 aa32.55■■■□□ 2.8
SRM-205ENST00000487300 NGLY1Q96IV0 654 aa32.55■■■□□ 2.8
SRM-205ENST00000487300 TRPM1Q7Z4N2 1603 aa32.55■■■□□ 2.8
SRM-205ENST00000487300 CRYBG1Q9Y4K1 1723 aa32.54■■■□□ 2.8
SRM-205ENST00000487300 RGS12O14924 1447 aa32.54■■■□□ 2.8
SRM-205ENST00000487300 HIRIP3Q9BW71 556 aaPredicted RBP32.54■■■□□ 2.8
SRM-205ENST00000487300 WASLO00401 505 aaPredicted RBP32.52■■■□□ 2.8
SRM-205ENST00000487300 ATRNO75882 1429 aa32.51■■■□□ 2.8
SRM-205ENST00000487300 PLCH1Q4KWH8 1693 aa32.51■■■□□ 2.79
SRM-205ENST00000487300 BCL9LQ86UU0 1499 aa32.51■■■□□ 2.79
SRM-205ENST00000487300 QTRT2Q9H974 415 aaKnown RBP32.5■■■□□ 2.79
SRM-205ENST00000487300 NWD2Q9ULI1 1742 aa32.5■■■□□ 2.79
SRM-205ENST00000487300 RBM6P78332 1123 aaKnown RBP32.49■■■□□ 2.79
SRM-205ENST00000487300 QRICH2Q9H0J4 1663 aa32.49■■■□□ 2.79
SRM-205ENST00000487300 ARHGEF10O15013 1369 aa32.47■■■□□ 2.79
SRM-205ENST00000487300 SLIT2O94813 1529 aa32.47■■■□□ 2.79
SRM-205ENST00000487300 PSME1Q06323 249 aa32.47■■■□□ 2.79
SRM-205ENST00000487300 USP21Q9UK80 565 aa32.47■■■□□ 2.79
SRM-205ENST00000487300 NBPF1Q3BBV0 1214 aa32.45■■■□□ 2.79
SRM-205ENST00000487300 PMFBP1Q8TBY8 1022 aa32.45■■■□□ 2.79
SRM-205ENST00000487300 TRPC5Q9UL62 973 aaPredicted RBP32.43■■■□□ 2.78
SRM-205ENST00000487300 L3MBTL2Q969R5 705 aa32.42■■■□□ 2.78
SRM-205ENST00000487300 EP400Q96L91 3159 aa32.41■■■□□ 2.78
SRM-205ENST00000487300 SIN3AQ96ST3 1273 aa32.39■■■□□ 2.78
SRM-205ENST00000487300 GLI3P10071 1580 aa32.39■■■□□ 2.78
SRM-205ENST00000487300 NRAPQ86VF7 1730 aa32.39■■■□□ 2.78
SRM-205ENST00000487300 GPRASP1Q5JY77 1395 aa32.37■■■□□ 2.77
SRM-205ENST00000487300 UPF1Q92900 1129 aaKnown RBP eCLIP32.36■■■□□ 2.77
SRM-205ENST00000487300 PHRF1Q9P1Y6 1649 aaKnown RBP32.36■■■□□ 2.77
SRM-205ENST00000487300 NUDT16Q96DE0 195 aaKnown RBP32.35■■■□□ 2.77
SRM-205ENST00000487300 POLR3AO14802 1390 aaPredicted RBP32.34■■■□□ 2.77
SRM-205ENST00000487300 COL14A1Q05707 1796 aaKnown RBP32.33■■■□□ 2.77
SRM-205ENST00000487300 CABLES1Q8TDN4 633 aa32.32■■■□□ 2.76
SRM-205ENST00000487300 CDK19Q9BWU1 502 aa32.32■■■□□ 2.76
SRM-205ENST00000487300 CENPJQ9HC77 1338 aaPredicted RBP32.31■■■□□ 2.76
SRM-205ENST00000487300 RALGAPBQ86X10 1494 aa32.29■■■□□ 2.76
SRM-205ENST00000487300 BRWD3Q6RI45 1802 aa32.28■■■□□ 2.76
SRM-205ENST00000487300 UNC5CLQ8IV45 518 aa32.28■■■□□ 2.76
SRM-205ENST00000487300 NGDNQ8NEJ9 315 aaKnown RBP32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms