RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MYOM2P54296 1465 aa11.79□□□□□ -0.52
PDPN-205ENST00000487038 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
PDPN-205ENST00000487038 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
PDPN-205ENST00000487038 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.52
PDPN-205ENST00000487038 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.52
PDPN-205ENST00000487038 PPLO60437 1756 aa11.77□□□□□ -0.52
PDPN-205ENST00000487038 HFM1A2PYH4 1435 aa11.77□□□□□ -0.53
PDPN-205ENST00000487038 GLI3P10071 1580 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 USP32Q8NFA0 1604 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 PLCH1Q4KWH8 1693 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 NWD2Q9ULI1 1742 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
PDPN-205ENST00000487038 PXDNQ92626 1479 aa11.75□□□□□ -0.53
PDPN-205ENST00000487038 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
PDPN-205ENST00000487038 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
PDPN-205ENST00000487038 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
PDPN-205ENST00000487038 LRPPRCP42704 1394 aaKnown RBP11.74□□□□□ -0.53
PDPN-205ENST00000487038 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
PDPN-205ENST00000487038 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
PDPN-205ENST00000487038 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
PDPN-205ENST00000487038 FMN2Q9NZ56 1722 aa11.72□□□□□ -0.53
PDPN-205ENST00000487038 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
PDPN-205ENST00000487038 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
PDPN-205ENST00000487038 IFT172Q9UG01 1749 aa11.72□□□□□ -0.53
PDPN-205ENST00000487038 SLIT2O94813 1529 aa11.7□□□□□ -0.54
PDPN-205ENST00000487038 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
PDPN-205ENST00000487038 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
PDPN-205ENST00000487038 UNC5CLQ8IV45 518 aa11.69□□□□□ -0.54
PDPN-205ENST00000487038 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
PDPN-205ENST00000487038 RGPD8O14715 1765 aaPredicted RBP11.68□□□□□ -0.54
PDPN-205ENST00000487038 NRAPQ86VF7 1730 aa11.66□□□□□ -0.54
PDPN-205ENST00000487038 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
PDPN-205ENST00000487038 NAIPQ13075 1403 aa11.66□□□□□ -0.54
PDPN-205ENST00000487038 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
PDPN-205ENST00000487038 FOXO3O43524 673 aa11.65□□□□□ -0.54
PDPN-205ENST00000487038 ITGAEP38570 1179 aa11.65□□□□□ -0.54
PDPN-205ENST00000487038 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
PDPN-205ENST00000487038 TNS1Q9HBL0 1735 aaKnown RBP11.65□□□□□ -0.54
PDPN-205ENST00000487038 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
PDPN-205ENST00000487038 TECPR2O15040 1411 aa11.64□□□□□ -0.55
PDPN-205ENST00000487038 BAG6P46379 1132 aa11.64□□□□□ -0.55
PDPN-205ENST00000487038 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
PDPN-205ENST00000487038 SPATA31A3Q5VYP0 1347 aa11.63□□□□□ -0.55
PDPN-205ENST00000487038 TNS3Q68CZ2 1445 aa11.63□□□□□ -0.55
PDPN-205ENST00000487038 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
PDPN-205ENST00000487038 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
PDPN-205ENST00000487038 VPS72Q15906 364 aa11.62□□□□□ -0.55
PDPN-205ENST00000487038 KRT27Q7Z3Y8 459 aa11.62□□□□□ -0.55
PDPN-205ENST00000487038 CCDC9Q9Y3X0 531 aaKnown RBP11.62□□□□□ -0.55
PDPN-205ENST00000487038 A0A0G2JS52 829 aa11.61□□□□□ -0.55
PDPN-205ENST00000487038 MYT1Q01538 1121 aa11.61□□□□□ -0.55
PDPN-205ENST00000487038 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
PDPN-205ENST00000487038 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
PDPN-205ENST00000487038 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
PDPN-205ENST00000487038 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
PDPN-205ENST00000487038 HRCP23327 699 aa11.59□□□□□ -0.55
PDPN-205ENST00000487038 PSME1Q06323 249 aa11.59□□□□□ -0.55
PDPN-205ENST00000487038 ONECUT3O60422 494 aaPredicted RBP11.58□□□□□ -0.56
PDPN-205ENST00000487038 KRT28Q7Z3Y7 464 aa11.58□□□□□ -0.56
PDPN-205ENST00000487038 THSD7AQ9UPZ6 1657 aa11.58□□□□□ -0.56
PDPN-205ENST00000487038 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
PDPN-205ENST00000487038 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
PDPN-205ENST00000487038 RREB1Q92766 1687 aa11.57□□□□□ -0.56
PDPN-205ENST00000487038 ALS2Q96Q42 1657 aa11.57□□□□□ -0.56
PDPN-205ENST00000487038 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
PDPN-205ENST00000487038 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
PDPN-205ENST00000487038 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
PDPN-205ENST00000487038 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 ANKRD30BQ9BXX2 1392 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 YTHDC2Q9H6S0 1430 aaKnown RBP11.55□□□□□ -0.56
PDPN-205ENST00000487038 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 STK26Q9P289 416 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 NUP188Q5SRE5 1749 aa11.55□□□□□ -0.56
PDPN-205ENST00000487038 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
PDPN-205ENST00000487038 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
PDPN-205ENST00000487038 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
PDPN-205ENST00000487038 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
PDPN-205ENST00000487038 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
PDPN-205ENST00000487038 R3HDM1Q15032 1099 aaKnown RBP11.53□□□□□ -0.56
PDPN-205ENST00000487038 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
PDPN-205ENST00000487038 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
PDPN-205ENST00000487038 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
PDPN-205ENST00000487038 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
PDPN-205ENST00000487038 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
PDPN-205ENST00000487038 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.57
PDPN-205ENST00000487038 PARD3Q8TEW0 1356 aa11.52□□□□□ -0.57
PDPN-205ENST00000487038 ANKARQ7Z5J8 1434 aa11.52□□□□□ -0.57
PDPN-205ENST00000487038 YY1P25490 414 aa11.5□□□□□ -0.57
PDPN-205ENST00000487038 BTG4Q9NY30 223 aa11.5□□□□□ -0.57
PDPN-205ENST00000487038 SPATA31E1Q6ZUB1 1445 aa11.5□□□□□ -0.57
PDPN-205ENST00000487038 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
PDPN-205ENST00000487038 RGPD3A6NKT7 1758 aaPredicted RBP11.49□□□□□ -0.57
PDPN-205ENST00000487038 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
PDPN-205ENST00000487038 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
PDPN-205ENST00000487038 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
PDPN-205ENST00000487038 SIRT1Q96EB6 747 aa11.49□□□□□ -0.57
PDPN-205ENST00000487038 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
PDPN-205ENST00000487038 TMEM132EQ6IEE7 984 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms