RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
GMDS-205ENST00000486793 CCDC144AA2RUR9 1427 aa28.02■■■□□ 2.08
GMDS-205ENST00000486793 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.07
GMDS-205ENST00000486793 SPATA31E1Q6ZUB1 1445 aa27.99■■■□□ 2.07
GMDS-205ENST00000486793 FOXO3O43524 673 aa27.98■■■□□ 2.07
GMDS-205ENST00000486793 USP21Q9UK80 565 aa27.98■■■□□ 2.07
GMDS-205ENST00000486793 ANKRD30BQ9BXX2 1392 aa27.98■■■□□ 2.07
GMDS-205ENST00000486793 NPHP3Q7Z494 1330 aa27.97■■■□□ 2.07
GMDS-205ENST00000486793 NUTM2FA1L443 756 aa27.97■■■□□ 2.07
GMDS-205ENST00000486793 RGS12O14924 1447 aa27.96■■■□□ 2.07
GMDS-205ENST00000486793 XPCQ01831 940 aaPredicted RBP27.96■■■□□ 2.07
GMDS-205ENST00000486793 FNBP4Q8N3X1 1017 aaPredicted RBP27.96■■■□□ 2.07
GMDS-205ENST00000486793 LAMC1P11047 1609 aa27.95■■■□□ 2.06
GMDS-205ENST00000486793 LRPPRCP42704 1394 aaKnown RBP27.95■■■□□ 2.06
GMDS-205ENST00000486793 PPLO60437 1756 aa27.94■■■□□ 2.06
GMDS-205ENST00000486793 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
GMDS-205ENST00000486793 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
GMDS-205ENST00000486793 PLEKHH1Q9ULM0 1364 aa27.92■■■□□ 2.06
GMDS-205ENST00000486793 TECPR2O15040 1411 aa27.91■■■□□ 2.06
GMDS-205ENST00000486793 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
GMDS-205ENST00000486793 PXDNQ92626 1479 aa27.87■■■□□ 2.05
GMDS-205ENST00000486793 PIK3C2GO75747 1445 aa27.86■■■□□ 2.05
GMDS-205ENST00000486793 SIRT1Q96EB6 747 aa27.86■■■□□ 2.05
GMDS-205ENST00000486793 C14orf93Q9H972 538 aaKnown RBP27.86■■■□□ 2.05
GMDS-205ENST00000486793 MYOM2P54296 1465 aa27.85■■■□□ 2.05
GMDS-205ENST00000486793 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
GMDS-205ENST00000486793 CFAP70Q5T0N1 1121 aa27.83■■■□□ 2.05
GMDS-205ENST00000486793 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
GMDS-205ENST00000486793 ATRNO75882 1429 aa27.82■■■□□ 2.04
GMDS-205ENST00000486793 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
GMDS-205ENST00000486793 BCL9LQ86UU0 1499 aa27.8■■■□□ 2.04
GMDS-205ENST00000486793 ATAD2Q6PL18 1390 aa27.79■■■□□ 2.04
GMDS-205ENST00000486793 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
GMDS-205ENST00000486793 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
GMDS-205ENST00000486793 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
GMDS-205ENST00000486793 GJD4Q96KN9 370 aaPredicted RBP27.76■■■□□ 2.03
GMDS-205ENST00000486793 SAFB2Q14151 953 aaKnown RBP eCLIP27.75■■■□□ 2.03
GMDS-205ENST00000486793 PRAM1Q96QH2 718 aa27.75■■■□□ 2.03
GMDS-205ENST00000486793 PHF8Q9UPP1 1060 aa27.75■■■□□ 2.03
GMDS-205ENST00000486793 PSME1Q06323 249 aa27.72■■■□□ 2.03
GMDS-205ENST00000486793 UNC5CLQ8IV45 518 aa27.72■■■□□ 2.03
GMDS-205ENST00000486793 IFT172Q9UG01 1749 aa27.72■■■□□ 2.03
GMDS-205ENST00000486793 NRXN1Q9ULB1 1477 aa27.71■■■□□ 2.03
GMDS-205ENST00000486793 POGKQ9P215 609 aa27.7■■■□□ 2.02
GMDS-205ENST00000486793 CABLES1Q8TDN4 633 aa27.69■■■□□ 2.02
GMDS-205ENST00000486793 PLEKHG5O94827 1062 aa27.68■■■□□ 2.02
GMDS-205ENST00000486793 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
GMDS-205ENST00000486793 SRCAPQ6ZRS2 3230 aa27.68■■■□□ 2.02
GMDS-205ENST00000486793 HAP1P54257 671 aaPredicted RBP27.67■■■□□ 2.02
GMDS-205ENST00000486793 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
GMDS-205ENST00000486793 LMOD2Q6P5Q4 547 aa27.66■■■□□ 2.02
GMDS-205ENST00000486793 PMFBP1Q8TBY8 1022 aa27.65■■■□□ 2.02
GMDS-205ENST00000486793 FMN2Q9NZ56 1722 aa27.64■■■□□ 2.02
GMDS-205ENST00000486793 SLIT2O94813 1529 aa27.64■■■□□ 2.02
GMDS-205ENST00000486793 CCDC125Q86Z20 511 aa27.64■■■□□ 2.02
GMDS-205ENST00000486793 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
GMDS-205ENST00000486793 KDM2AQ9Y2K7 1162 aa27.63■■■□□ 2.01
GMDS-205ENST00000486793 TNS3Q68CZ2 1445 aa27.62■■■□□ 2.01
GMDS-205ENST00000486793 RALGAPBQ86X10 1494 aa27.61■■■□□ 2.01
GMDS-205ENST00000486793 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
GMDS-205ENST00000486793 HIRIP3Q9BW71 556 aaPredicted RBP27.6■■■□□ 2.01
GMDS-205ENST00000486793 DCAF11Q8TEB1 546 aa27.59■■■□□ 2.01
GMDS-205ENST00000486793 ZRANB1Q9UGI0 708 aa27.59■■■□□ 2.01
GMDS-205ENST00000486793 EP400Q96L91 3159 aa27.59■■■□□ 2.01
GMDS-205ENST00000486793 KIF1AQ12756 1690 aa27.59■■■□□ 2.01
GMDS-205ENST00000486793 VPS72Q15906 364 aa27.58■■■□□ 2.01
GMDS-205ENST00000486793 FAM83GA6ND36 823 aa27.56■■■□□ 2
GMDS-205ENST00000486793 SEPT12Q8IYM1 358 aa27.56■■■□□ 2
GMDS-205ENST00000486793 MINK1Q8N4C8 1332 aaPredicted RBP27.56■■■□□ 2
GMDS-205ENST00000486793 ARHGEF10O15013 1369 aa27.56■■■□□ 2
GMDS-205ENST00000486793 CCDC9Q9Y3X0 531 aaKnown RBP27.55■■■□□ 2
GMDS-205ENST00000486793 ANKARQ7Z5J8 1434 aa27.55■■■□□ 2
GMDS-205ENST00000486793 DLC1Q96QB1 1528 aa27.55■■■□□ 2
GMDS-205ENST00000486793 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
GMDS-205ENST00000486793 ONECUT3O60422 494 aaPredicted RBP27.52■■■□□ 2
GMDS-205ENST00000486793 USP32Q8NFA0 1604 aa27.52■■■□□ 2
GMDS-205ENST00000486793 ADGRB1O14514 1584 aa27.52■■■□□ 2
GMDS-205ENST00000486793 GLI3P10071 1580 aa27.52■■■□□ 2
GMDS-205ENST00000486793 PRR36Q9H6K5 1346 aa27.51■■□□□ 1.99
GMDS-205ENST00000486793 WASLO00401 505 aaPredicted RBP27.51■■□□□ 1.99
GMDS-205ENST00000486793 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
GMDS-205ENST00000486793 GPRASP1Q5JY77 1395 aa27.48■■□□□ 1.99
GMDS-205ENST00000486793 HRCP23327 699 aa27.48■■□□□ 1.99
GMDS-205ENST00000486793 RGPD8O14715 1765 aaPredicted RBP27.46■■□□□ 1.99
GMDS-205ENST00000486793 NGDNQ8NEJ9 315 aaKnown RBP27.46■■□□□ 1.99
GMDS-205ENST00000486793 BTG4Q9NY30 223 aa27.46■■□□□ 1.99
GMDS-205ENST00000486793 BLMP54132 1417 aaPredicted RBP27.46■■□□□ 1.99
GMDS-205ENST00000486793 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.46■■□□□ 1.99
GMDS-205ENST00000486793 KRT27Q7Z3Y8 459 aa27.45■■□□□ 1.98
GMDS-205ENST00000486793 DEFB132Q7Z7B7 95 aa27.45■■□□□ 1.98
GMDS-205ENST00000486793 EIF3AQ14152 1382 aaKnown RBP27.45■■□□□ 1.98
GMDS-205ENST00000486793 PAK3O75914 559 aaPredicted RBP27.43■■□□□ 1.98
GMDS-205ENST00000486793 SF3B2Q13435 895 aaKnown RBP27.42■■□□□ 1.98
GMDS-205ENST00000486793 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
GMDS-205ENST00000486793 FAM98CQ17RN3 349 aaKnown RBP27.41■■□□□ 1.98
GMDS-205ENST00000486793 A0A0G2JS52 829 aa27.4■■□□□ 1.98
GMDS-205ENST00000486793 MYT1Q01538 1121 aa27.4■■□□□ 1.98
GMDS-205ENST00000486793 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
GMDS-205ENST00000486793 TULP4Q9NRJ4 1543 aa27.38■■□□□ 1.97
GMDS-205ENST00000486793 CDK19Q9BWU1 502 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms