RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 BRINP3Q76B58 766 aa28.53■■■□□ 2.16
LIMK1-206ENST00000486361 POGKQ9P215 609 aa28.52■■■□□ 2.16
LIMK1-206ENST00000486361 NUTM2FA1L443 756 aa28.5■■■□□ 2.15
LIMK1-206ENST00000486361 ORAI2Q96SN7 254 aa28.48■■■□□ 2.15
LIMK1-206ENST00000486361 C1orf167Q5SNV9 1468 aa28.46■■■□□ 2.15
LIMK1-206ENST00000486361 DDX17Q92841 729 aaKnown RBP28.46■■■□□ 2.15
LIMK1-206ENST00000486361 DLC1Q96QB1 1528 aa28.45■■■□□ 2.15
LIMK1-206ENST00000486361 TONSLQ96HA7 1378 aa28.44■■■□□ 2.14
LIMK1-206ENST00000486361 NBPF8Q3BBV2 869 aa28.43■■■□□ 2.14
LIMK1-206ENST00000486361 HIRIP3Q9BW71 556 aaPredicted RBP28.43■■■□□ 2.14
LIMK1-206ENST00000486361 MINK1Q8N4C8 1332 aaPredicted RBP28.42■■■□□ 2.14
LIMK1-206ENST00000486361 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
LIMK1-206ENST00000486361 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
LIMK1-206ENST00000486361 ESCO1Q5FWF5 840 aa28.4■■■□□ 2.14
LIMK1-206ENST00000486361 KIAA1210Q9ULL0 1709 aa28.4■■■□□ 2.14
LIMK1-206ENST00000486361 AHDC1Q5TGY3 1603 aaPredicted RBP28.35■■■□□ 2.13
LIMK1-206ENST00000486361 DISP3Q9P2K9 1392 aa28.35■■■□□ 2.13
LIMK1-206ENST00000486361 COL16A1Q07092 1604 aaPredicted RBP28.34■■■□□ 2.13
LIMK1-206ENST00000486361 ARHGEF28Q8N1W1 1705 aaKnown RBP28.32■■■□□ 2.12
LIMK1-206ENST00000486361 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
LIMK1-206ENST00000486361 ROCK2O75116 1388 aaKnown RBP28.31■■■□□ 2.12
LIMK1-206ENST00000486361 TRPM1Q7Z4N2 1603 aa28.31■■■□□ 2.12
LIMK1-206ENST00000486361 CCER1Q8TC90 406 aaPredicted RBP28.3■■■□□ 2.12
LIMK1-206ENST00000486361 JCADQ9P266 1359 aa28.29■■■□□ 2.12
LIMK1-206ENST00000486361 WASLO00401 505 aaPredicted RBP28.29■■■□□ 2.12
LIMK1-206ENST00000486361 FOXO3O43524 673 aa28.29■■■□□ 2.12
LIMK1-206ENST00000486361 XPCQ01831 940 aaPredicted RBP28.28■■■□□ 2.12
LIMK1-206ENST00000486361 NHSL1Q5SYE7 1610 aa28.28■■■□□ 2.12
LIMK1-206ENST00000486361 MED1Q15648 1581 aaPredicted RBP28.27■■■□□ 2.12
LIMK1-206ENST00000486361 CENPJQ9HC77 1338 aaPredicted RBP28.25■■■□□ 2.11
LIMK1-206ENST00000486361 LRRC59Q96AG4 307 aaKnown RBP28.25■■■□□ 2.11
LIMK1-206ENST00000486361 ADGRB2O60241 1585 aa28.24■■■□□ 2.11
LIMK1-206ENST00000486361 SOS2Q07890 1332 aaPredicted RBP28.24■■■□□ 2.11
LIMK1-206ENST00000486361 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
LIMK1-206ENST00000486361 PRR36Q9H6K5 1346 aa28.23■■■□□ 2.11
LIMK1-206ENST00000486361 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
LIMK1-206ENST00000486361 CDK19Q9BWU1 502 aa28.23■■■□□ 2.11
LIMK1-206ENST00000486361 RGPD8O14715 1765 aaPredicted RBP28.23■■■□□ 2.11
LIMK1-206ENST00000486361 CLSPNQ9HAW4 1339 aa28.22■■■□□ 2.11
LIMK1-206ENST00000486361 NPHP3Q7Z494 1330 aa28.21■■■□□ 2.11
LIMK1-206ENST00000486361 CARD11Q9BXL7 1154 aa28.21■■■□□ 2.11
LIMK1-206ENST00000486361 USP32Q8NFA0 1604 aa28.19■■■□□ 2.1
LIMK1-206ENST00000486361 NUTM2BA6NNL0 878 aaPredicted RBP28.19■■■□□ 2.1
LIMK1-206ENST00000486361 NUTM2EB1AL46 878 aaPredicted RBP28.19■■■□□ 2.1
LIMK1-206ENST00000486361 NUTM2AQ8IVF1 878 aaPredicted RBP28.19■■■□□ 2.1
LIMK1-206ENST00000486361 NUDT16Q96DE0 195 aaKnown RBP28.18■■■□□ 2.1
LIMK1-206ENST00000486361 PHF23Q9BUL5 403 aaPredicted RBP28.18■■■□□ 2.1
LIMK1-206ENST00000486361 GPRASP1Q5JY77 1395 aa28.18■■■□□ 2.1
LIMK1-206ENST00000486361 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
LIMK1-206ENST00000486361 KRT28Q7Z3Y7 464 aa28.17■■■□□ 2.1
LIMK1-206ENST00000486361 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
LIMK1-206ENST00000486361 PNPLA6Q8IY17 1366 aa28.15■■■□□ 2.1
LIMK1-206ENST00000486361 TULP4Q9NRJ4 1543 aa28.15■■■□□ 2.1
LIMK1-206ENST00000486361 SPATA31A6Q5VVP1 1343 aa28.15■■■□□ 2.1
LIMK1-206ENST00000486361 PXDNQ92626 1479 aa28.15■■■□□ 2.1
LIMK1-206ENST00000486361 EIF3AQ14152 1382 aaKnown RBP28.14■■■□□ 2.1
LIMK1-206ENST00000486361 SRPK2P78362 688 aaKnown RBP28.13■■■□□ 2.09
LIMK1-206ENST00000486361 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
LIMK1-206ENST00000486361 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
LIMK1-206ENST00000486361 LRP6O75581 1613 aa28.12■■■□□ 2.09
LIMK1-206ENST00000486361 PSME1Q06323 249 aa28.12■■■□□ 2.09
LIMK1-206ENST00000486361 KIF1AQ12756 1690 aa28.11■■■□□ 2.09
LIMK1-206ENST00000486361 QRICH2Q9H0J4 1663 aa28.11■■■□□ 2.09
LIMK1-206ENST00000486361 TIMELESSQ9UNS1 1208 aa28.11■■■□□ 2.09
LIMK1-206ENST00000486361 ILDR2Q71H61 639 aa28.1■■■□□ 2.09
LIMK1-206ENST00000486361 ATP7BP35670 1465 aa28.09■■■□□ 2.09
LIMK1-206ENST00000486361 MEX3CQ5U5Q3 659 aaKnown RBP28.09■■■□□ 2.09
LIMK1-206ENST00000486361 NGDNQ8NEJ9 315 aaKnown RBP28.09■■■□□ 2.09
LIMK1-206ENST00000486361 RGS17Q9UGC6 210 aaPredicted RBP28.09■■■□□ 2.09
LIMK1-206ENST00000486361 CCDC61Q9Y6R9 512 aa28.06■■■□□ 2.08
LIMK1-206ENST00000486361 SPATA31A3Q5VYP0 1347 aa28.06■■■□□ 2.08
LIMK1-206ENST00000486361 PLEKHG5O94827 1062 aa28.05■■■□□ 2.08
LIMK1-206ENST00000486361 EVC2Q86UK5 1308 aa28.04■■■□□ 2.08
LIMK1-206ENST00000486361 LMOD2Q6P5Q4 547 aa28.04■■■□□ 2.08
LIMK1-206ENST00000486361 ADAMTS2O95450 1211 aa28.03■■■□□ 2.08
LIMK1-206ENST00000486361 ACEP12821 1306 aa28■■■□□ 2.07
LIMK1-206ENST00000486361 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
LIMK1-206ENST00000486361 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
LIMK1-206ENST00000486361 CABP1Q9NZU7 370 aa27.99■■■□□ 2.07
LIMK1-206ENST00000486361 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
LIMK1-206ENST00000486361 PAK3O75914 559 aaPredicted RBP27.98■■■□□ 2.07
LIMK1-206ENST00000486361 TNS3Q68CZ2 1445 aa27.98■■■□□ 2.07
LIMK1-206ENST00000486361 PPIP5K1Q6PFW1 1433 aa27.98■■■□□ 2.07
LIMK1-206ENST00000486361 POTEAQ6S8J7 498 aa27.97■■■□□ 2.07
LIMK1-206ENST00000486361 CABLES1Q8TDN4 633 aa27.97■■■□□ 2.07
LIMK1-206ENST00000486361 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
LIMK1-206ENST00000486361 ITSN1Q15811 1721 aa27.96■■■□□ 2.07
LIMK1-206ENST00000486361 TOPAZ1Q8N9V7 1692 aa27.94■■■□□ 2.06
LIMK1-206ENST00000486361 COL22A1Q8NFW1 1626 aaPredicted RBP27.94■■■□□ 2.06
LIMK1-206ENST00000486361 POLR3AO14802 1390 aaPredicted RBP27.94■■■□□ 2.06
LIMK1-206ENST00000486361 SBNO2Q9Y2G9 1366 aa27.92■■■□□ 2.06
LIMK1-206ENST00000486361 NGLY1Q96IV0 654 aa27.92■■■□□ 2.06
LIMK1-206ENST00000486361 TESK2Q96S53 571 aa27.92■■■□□ 2.06
LIMK1-206ENST00000486361 AFF2P51816 1311 aa27.92■■■□□ 2.06
LIMK1-206ENST00000486361 USP47Q96K76 1375 aa27.91■■■□□ 2.06
LIMK1-206ENST00000486361 TRPM3Q9HCF6 1732 aaPredicted RBP27.91■■■□□ 2.06
LIMK1-206ENST00000486361 ARHGEF10O15013 1369 aa27.89■■■□□ 2.06
LIMK1-206ENST00000486361 HAP1P54257 671 aaPredicted RBP27.89■■■□□ 2.06
LIMK1-206ENST00000486361 NUTM2GQ5VZR2 741 aa27.89■■■□□ 2.06
LIMK1-206ENST00000486361 ZNF772Q68DY9 489 aaPredicted RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms