RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
SNX21-211ENST00000486336 PRAM1Q96QH2 718 aa16■□□□□ 0.15
SNX21-211ENST00000486336 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
SNX21-211ENST00000486336 TECPR2O15040 1411 aa16■□□□□ 0.15
SNX21-211ENST00000486336 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
SNX21-211ENST00000486336 AHDC1Q5TGY3 1603 aaPredicted RBP15.99■□□□□ 0.15
SNX21-211ENST00000486336 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
SNX21-211ENST00000486336 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
SNX21-211ENST00000486336 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
SNX21-211ENST00000486336 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
SNX21-211ENST00000486336 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
SNX21-211ENST00000486336 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
SNX21-211ENST00000486336 LRRC59Q96AG4 307 aaKnown RBP15.98■□□□□ 0.15
SNX21-211ENST00000486336 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
SNX21-211ENST00000486336 LAMC1P11047 1609 aa15.97■□□□□ 0.15
SNX21-211ENST00000486336 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
SNX21-211ENST00000486336 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
SNX21-211ENST00000486336 RGS17Q9UGC6 210 aaPredicted RBP15.94■□□□□ 0.14
SNX21-211ENST00000486336 FOXO3O43524 673 aa15.93■□□□□ 0.14
SNX21-211ENST00000486336 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
SNX21-211ENST00000486336 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
SNX21-211ENST00000486336 MINK1Q8N4C8 1332 aaPredicted RBP15.93■□□□□ 0.14
SNX21-211ENST00000486336 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
SNX21-211ENST00000486336 SOCS7O14512 581 aa15.92■□□□□ 0.14
SNX21-211ENST00000486336 NHSL1Q5SYE7 1610 aa15.92■□□□□ 0.14
SNX21-211ENST00000486336 L3MBTL2Q969R5 705 aa15.91■□□□□ 0.14
SNX21-211ENST00000486336 ADGRB1O14514 1584 aa15.91■□□□□ 0.14
SNX21-211ENST00000486336 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
SNX21-211ENST00000486336 SOS2Q07890 1332 aaPredicted RBP15.9■□□□□ 0.14
SNX21-211ENST00000486336 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
SNX21-211ENST00000486336 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
SNX21-211ENST00000486336 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
SNX21-211ENST00000486336 SHPRHQ149N8 1683 aa15.89■□□□□ 0.13
SNX21-211ENST00000486336 LRP6O75581 1613 aa15.88■□□□□ 0.13
SNX21-211ENST00000486336 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
SNX21-211ENST00000486336 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
SNX21-211ENST00000486336 FMN2Q9NZ56 1722 aa15.86■□□□□ 0.13
SNX21-211ENST00000486336 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
SNX21-211ENST00000486336 KRT28Q7Z3Y7 464 aa15.86■□□□□ 0.13
SNX21-211ENST00000486336 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
SNX21-211ENST00000486336 C8orf37Q96NL8 207 aa15.85■□□□□ 0.13
SNX21-211ENST00000486336 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
SNX21-211ENST00000486336 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
SNX21-211ENST00000486336 PSME1Q06323 249 aa15.84■□□□□ 0.13
SNX21-211ENST00000486336 ZNF772Q68DY9 489 aaPredicted RBP15.84■□□□□ 0.13
SNX21-211ENST00000486336 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.12
SNX21-211ENST00000486336 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
SNX21-211ENST00000486336 NGLY1Q96IV0 654 aa15.82■□□□□ 0.12
SNX21-211ENST00000486336 AFF2P51816 1311 aa15.82■□□□□ 0.12
SNX21-211ENST00000486336 PXDNQ92626 1479 aa15.81■□□□□ 0.12
SNX21-211ENST00000486336 CDK19Q9BWU1 502 aa15.81■□□□□ 0.12
SNX21-211ENST00000486336 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
SNX21-211ENST00000486336 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
SNX21-211ENST00000486336 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
SNX21-211ENST00000486336 ANKARQ7Z5J8 1434 aa15.79■□□□□ 0.12
SNX21-211ENST00000486336 SPATA31A3Q5VYP0 1347 aa15.79■□□□□ 0.12
SNX21-211ENST00000486336 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
SNX21-211ENST00000486336 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
SNX21-211ENST00000486336 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
SNX21-211ENST00000486336 ARHGEF28Q8N1W1 1705 aaKnown RBP15.79■□□□□ 0.12
SNX21-211ENST00000486336 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
SNX21-211ENST00000486336 HAP1P54257 671 aaPredicted RBP15.78■□□□□ 0.12
SNX21-211ENST00000486336 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
SNX21-211ENST00000486336 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.12
SNX21-211ENST00000486336 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.12
SNX21-211ENST00000486336 QTRT2Q9H974 415 aaKnown RBP15.77■□□□□ 0.12
SNX21-211ENST00000486336 GPRASP1Q5JY77 1395 aa15.76■□□□□ 0.11
SNX21-211ENST00000486336 RXRBP28702 533 aa15.76■□□□□ 0.11
SNX21-211ENST00000486336 SRPK2P78362 688 aaKnown RBP15.76■□□□□ 0.11
SNX21-211ENST00000486336 NBPF8Q3BBV2 869 aa15.76■□□□□ 0.11
SNX21-211ENST00000486336 TULP4Q9NRJ4 1543 aa15.76■□□□□ 0.11
SNX21-211ENST00000486336 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
SNX21-211ENST00000486336 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
SNX21-211ENST00000486336 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
SNX21-211ENST00000486336 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
SNX21-211ENST00000486336 USP21Q9UK80 565 aa15.74■□□□□ 0.11
SNX21-211ENST00000486336 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
SNX21-211ENST00000486336 TNS3Q68CZ2 1445 aa15.73■□□□□ 0.11
SNX21-211ENST00000486336 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
SNX21-211ENST00000486336 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
SNX21-211ENST00000486336 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
SNX21-211ENST00000486336 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
SNX21-211ENST00000486336 CARD11Q9BXL7 1154 aa15.71■□□□□ 0.11
SNX21-211ENST00000486336 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
SNX21-211ENST00000486336 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
SNX21-211ENST00000486336 ACEP12821 1306 aa15.69■□□□□ 0.1
SNX21-211ENST00000486336 FNBP4Q8N3X1 1017 aaPredicted RBP15.69■□□□□ 0.1
SNX21-211ENST00000486336 TRPC5Q9UL62 973 aaPredicted RBP15.69■□□□□ 0.1
SNX21-211ENST00000486336 ATP7BP35670 1465 aa15.69■□□□□ 0.1
SNX21-211ENST00000486336 EVC2Q86UK5 1308 aa15.68■□□□□ 0.1
SNX21-211ENST00000486336 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
SNX21-211ENST00000486336 PLEKHG3A1L390 1219 aa15.67■□□□□ 0.1
SNX21-211ENST00000486336 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
SNX21-211ENST00000486336 ITSN1Q15811 1721 aa15.66■□□□□ 0.1
SNX21-211ENST00000486336 CABP1Q9NZU7 370 aa15.66■□□□□ 0.1
SNX21-211ENST00000486336 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
SNX21-211ENST00000486336 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
SNX21-211ENST00000486336 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
SNX21-211ENST00000486336 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
SNX21-211ENST00000486336 FAM83GA6ND36 823 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms