RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 DHX57Q6P158 1386 aaKnown RBP32.17■■■□□ 2.74
HLA-F-228ENST00000486194 SIRT1Q96EB6 747 aa32.16■■■□□ 2.74
HLA-F-228ENST00000486194 CFAP70Q5T0N1 1121 aa32.15■■■□□ 2.74
HLA-F-228ENST00000486194 WAPLQ7Z5K2 1190 aa32.15■■■□□ 2.74
HLA-F-228ENST00000486194 MEX3CQ5U5Q3 659 aaKnown RBP32.13■■■□□ 2.73
HLA-F-228ENST00000486194 ORAI2Q96SN7 254 aa32.12■■■□□ 2.73
HLA-F-228ENST00000486194 DCAF11Q8TEB1 546 aa32.1■■■□□ 2.73
HLA-F-228ENST00000486194 LRP6O75581 1613 aa32.09■■■□□ 2.73
HLA-F-228ENST00000486194 DDX17Q92841 729 aaKnown RBP32.09■■■□□ 2.73
HLA-F-228ENST00000486194 PLEKHH1Q9ULM0 1364 aa32.07■■■□□ 2.73
HLA-F-228ENST00000486194 KDM2AQ9Y2K7 1162 aa32.07■■■□□ 2.72
HLA-F-228ENST00000486194 ESCO1Q5FWF5 840 aa32.06■■■□□ 2.72
HLA-F-228ENST00000486194 POTEAQ6S8J7 498 aa32.05■■■□□ 2.72
HLA-F-228ENST00000486194 SOS2Q07890 1332 aaPredicted RBP32.04■■■□□ 2.72
HLA-F-228ENST00000486194 NUTM2BA6NNL0 878 aaPredicted RBP32.04■■■□□ 2.72
HLA-F-228ENST00000486194 NUTM2EB1AL46 878 aaPredicted RBP32.04■■■□□ 2.72
HLA-F-228ENST00000486194 NUTM2AQ8IVF1 878 aaPredicted RBP32.04■■■□□ 2.72
HLA-F-228ENST00000486194 PNPLA6Q8IY17 1366 aa32.03■■■□□ 2.72
HLA-F-228ENST00000486194 NPHP3Q7Z494 1330 aa32.02■■■□□ 2.72
HLA-F-228ENST00000486194 ZNF772Q68DY9 489 aaPredicted RBP32.02■■■□□ 2.72
HLA-F-228ENST00000486194 DLC1Q96QB1 1528 aa32■■■□□ 2.71
HLA-F-228ENST00000486194 PRAM1Q96QH2 718 aa31.99■■■□□ 2.71
HLA-F-228ENST00000486194 POGKQ9P215 609 aa31.98■■■□□ 2.71
HLA-F-228ENST00000486194 ADGRB1O14514 1584 aa31.98■■■□□ 2.71
HLA-F-228ENST00000486194 NUTM2FA1L443 756 aa31.97■■■□□ 2.71
HLA-F-228ENST00000486194 FMN2Q9NZ56 1722 aa31.95■■■□□ 2.71
HLA-F-228ENST00000486194 FOXO3O43524 673 aa31.93■■■□□ 2.7
HLA-F-228ENST00000486194 SAFB2Q14151 953 aaKnown RBP eCLIP31.92■■■□□ 2.7
HLA-F-228ENST00000486194 TRAK1Q9UPV9 953 aa31.92■■■□□ 2.7
HLA-F-228ENST00000486194 PXDNQ92626 1479 aa31.89■■■□□ 2.7
HLA-F-228ENST00000486194 KIF1AQ12756 1690 aa31.89■■■□□ 2.7
HLA-F-228ENST00000486194 AFF2P51816 1311 aa31.87■■■□□ 2.69
HLA-F-228ENST00000486194 C8orf37Q96NL8 207 aa31.86■■■□□ 2.69
HLA-F-228ENST00000486194 ADGRB2O60241 1585 aa31.84■■■□□ 2.69
HLA-F-228ENST00000486194 EIF3AQ14152 1382 aaKnown RBP31.83■■■□□ 2.69
HLA-F-228ENST00000486194 XPCQ01831 940 aaPredicted RBP31.83■■■□□ 2.69
HLA-F-228ENST00000486194 PHF8Q9UPP1 1060 aa31.83■■■□□ 2.69
HLA-F-228ENST00000486194 ANKARQ7Z5J8 1434 aa31.83■■■□□ 2.69
HLA-F-228ENST00000486194 COL22A1Q8NFW1 1626 aaPredicted RBP31.82■■■□□ 2.69
HLA-F-228ENST00000486194 ADAMTS2O95450 1211 aa31.82■■■□□ 2.68
HLA-F-228ENST00000486194 RXRBP28702 533 aa31.8■■■□□ 2.68
HLA-F-228ENST00000486194 NGLY1Q96IV0 654 aa31.8■■■□□ 2.68
HLA-F-228ENST00000486194 PSME1Q06323 249 aa31.79■■■□□ 2.68
HLA-F-228ENST00000486194 MINK1Q8N4C8 1332 aaPredicted RBP31.78■■■□□ 2.68
HLA-F-228ENST00000486194 KRT28Q7Z3Y7 464 aa31.78■■■□□ 2.68
HLA-F-228ENST00000486194 HIRIP3Q9BW71 556 aaPredicted RBP31.77■■■□□ 2.68
HLA-F-228ENST00000486194 SPATA31A3Q5VYP0 1347 aa31.76■■■□□ 2.68
HLA-F-228ENST00000486194 KIAA1210Q9ULL0 1709 aa31.76■■■□□ 2.67
HLA-F-228ENST00000486194 WASLO00401 505 aaPredicted RBP31.74■■■□□ 2.67
HLA-F-228ENST00000486194 RGPD8O14715 1765 aaPredicted RBP31.72■■■□□ 2.67
HLA-F-228ENST00000486194 QTRT2Q9H974 415 aaKnown RBP31.72■■■□□ 2.67
HLA-F-228ENST00000486194 ARHGEF28Q8N1W1 1705 aaKnown RBP31.72■■■□□ 2.67
HLA-F-228ENST00000486194 CDK12Q9NYV4 1490 aaPredicted RBP31.72■■■□□ 2.67
HLA-F-228ENST00000486194 TULP4Q9NRJ4 1543 aa31.71■■■□□ 2.67
HLA-F-228ENST00000486194 USP32Q8NFA0 1604 aa31.7■■■□□ 2.66
HLA-F-228ENST00000486194 SBNO1A3KN83 1393 aa31.69■■■□□ 2.66
HLA-F-228ENST00000486194 TNS3Q68CZ2 1445 aa31.69■■■□□ 2.66
HLA-F-228ENST00000486194 FNBP4Q8N3X1 1017 aaPredicted RBP31.69■■■□□ 2.66
HLA-F-228ENST00000486194 RBM6P78332 1123 aaKnown RBP31.68■■■□□ 2.66
HLA-F-228ENST00000486194 PMFBP1Q8TBY8 1022 aa31.68■■■□□ 2.66
HLA-F-228ENST00000486194 USP21Q9UK80 565 aa31.68■■■□□ 2.66
HLA-F-228ENST00000486194 L3MBTL2Q969R5 705 aa31.67■■■□□ 2.66
HLA-F-228ENST00000486194 ARHGEF10O15013 1369 aa31.66■■■□□ 2.66
HLA-F-228ENST00000486194 NBPF1Q3BBV0 1214 aa31.65■■■□□ 2.66
HLA-F-228ENST00000486194 GPRASP1Q5JY77 1395 aa31.65■■■□□ 2.66
HLA-F-228ENST00000486194 SIN3AQ96ST3 1273 aa31.64■■■□□ 2.66
HLA-F-228ENST00000486194 TRPC5Q9UL62 973 aaPredicted RBP31.64■■■□□ 2.66
HLA-F-228ENST00000486194 PRR36Q9H6K5 1346 aa31.64■■■□□ 2.66
HLA-F-228ENST00000486194 HAP1P54257 671 aaPredicted RBP31.62■■■□□ 2.65
HLA-F-228ENST00000486194 NEUROD1Q13562 356 aa31.62■■■□□ 2.65
HLA-F-228ENST00000486194 LMOD2Q6P5Q4 547 aa31.61■■■□□ 2.65
HLA-F-228ENST00000486194 MARF1Q9Y4F3 1742 aaKnown RBP31.59■■■□□ 2.65
HLA-F-228ENST00000486194 NGDNQ8NEJ9 315 aaKnown RBP31.59■■■□□ 2.65
HLA-F-228ENST00000486194 TRIM26Q12899 539 aaPredicted RBP31.58■■■□□ 2.65
HLA-F-228ENST00000486194 NUDT16Q96DE0 195 aaKnown RBP31.58■■■□□ 2.65
HLA-F-228ENST00000486194 CDK19Q9BWU1 502 aa31.57■■■□□ 2.64
HLA-F-228ENST00000486194 ATP7BP35670 1465 aa31.56■■■□□ 2.64
HLA-F-228ENST00000486194 CENPJQ9HC77 1338 aaPredicted RBP31.55■■■□□ 2.64
HLA-F-228ENST00000486194 ATRNO75882 1429 aa31.55■■■□□ 2.64
HLA-F-228ENST00000486194 ITSN1Q15811 1721 aa31.55■■■□□ 2.64
HLA-F-228ENST00000486194 BCL9LQ86UU0 1499 aa31.53■■■□□ 2.64
HLA-F-228ENST00000486194 RGS12O14924 1447 aa31.53■■■□□ 2.64
HLA-F-228ENST00000486194 CABLES1Q8TDN4 633 aa31.51■■■□□ 2.63
HLA-F-228ENST00000486194 CCDC61Q9Y6R9 512 aa31.51■■■□□ 2.63
HLA-F-228ENST00000486194 TRPM3Q9HCF6 1732 aaPredicted RBP31.5■■■□□ 2.63
HLA-F-228ENST00000486194 UNC5CLQ8IV45 518 aa31.49■■■□□ 2.63
HLA-F-228ENST00000486194 SLIT2O94813 1529 aa31.49■■■□□ 2.63
HLA-F-228ENST00000486194 ROCK2O75116 1388 aaKnown RBP31.47■■■□□ 2.63
HLA-F-228ENST00000486194 PAK3O75914 559 aaPredicted RBP31.47■■■□□ 2.63
HLA-F-228ENST00000486194 PLEKHG5O94827 1062 aa31.47■■■□□ 2.63
HLA-F-228ENST00000486194 TRPM1Q7Z4N2 1603 aa31.46■■■□□ 2.63
HLA-F-228ENST00000486194 UPF1Q92900 1129 aaKnown RBP eCLIP31.46■■■□□ 2.63
HLA-F-228ENST00000486194 ALS2Q96Q42 1657 aa31.45■■■□□ 2.63
HLA-F-228ENST00000486194 SRPK2P78362 688 aaKnown RBP31.45■■■□□ 2.63
HLA-F-228ENST00000486194 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.45■■■□□ 2.63
HLA-F-228ENST00000486194 PLEKHG3A1L390 1219 aa31.44■■■□□ 2.62
HLA-F-228ENST00000486194 GJD4Q96KN9 370 aaPredicted RBP31.44■■■□□ 2.62
HLA-F-228ENST00000486194 POLR3AO14802 1390 aaPredicted RBP31.43■■■□□ 2.62
HLA-F-228ENST00000486194 ABCA3Q99758 1704 aa31.43■■■□□ 2.62
HLA-F-228ENST00000486194 TOPAZ1Q8N9V7 1692 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms