RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ILDR2Q71H61 639 aa26.72■■□□□ 1.87
COL1A1-206ENST00000485870 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
COL1A1-206ENST00000485870 SIRT1Q96EB6 747 aa26.71■■□□□ 1.87
COL1A1-206ENST00000485870 NHSL1Q5SYE7 1610 aa26.71■■□□□ 1.87
COL1A1-206ENST00000485870 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
COL1A1-206ENST00000485870 ORAI2Q96SN7 254 aa26.7■■□□□ 1.86
COL1A1-206ENST00000485870 SAFB2Q14151 953 aaKnown RBP eCLIP26.69■■□□□ 1.86
COL1A1-206ENST00000485870 PRAM1Q96QH2 718 aa26.69■■□□□ 1.86
COL1A1-206ENST00000485870 SIN3AQ96ST3 1273 aa26.69■■□□□ 1.86
COL1A1-206ENST00000485870 TRAK1Q9UPV9 953 aa26.68■■□□□ 1.86
COL1A1-206ENST00000485870 DLC1Q96QB1 1528 aa26.68■■□□□ 1.86
COL1A1-206ENST00000485870 NUTM2FA1L443 756 aa26.67■■□□□ 1.86
COL1A1-206ENST00000485870 POGKQ9P215 609 aa26.66■■□□□ 1.86
COL1A1-206ENST00000485870 NEUROD1Q13562 356 aa26.65■■□□□ 1.86
COL1A1-206ENST00000485870 SHPRHQ149N8 1683 aa26.63■■□□□ 1.85
COL1A1-206ENST00000485870 FMN2Q9NZ56 1722 aa26.63■■□□□ 1.85
COL1A1-206ENST00000485870 ESCO1Q5FWF5 840 aa26.63■■□□□ 1.85
COL1A1-206ENST00000485870 L3MBTL2Q969R5 705 aa26.61■■□□□ 1.85
COL1A1-206ENST00000485870 KIAA1210Q9ULL0 1709 aa26.59■■□□□ 1.85
COL1A1-206ENST00000485870 LRRC59Q96AG4 307 aaKnown RBP26.59■■□□□ 1.85
COL1A1-206ENST00000485870 SPATA31A6Q5VVP1 1343 aa26.59■■□□□ 1.85
COL1A1-206ENST00000485870 LRP6O75581 1613 aa26.57■■□□□ 1.84
COL1A1-206ENST00000485870 ARHGEF28Q8N1W1 1705 aaKnown RBP26.56■■□□□ 1.84
COL1A1-206ENST00000485870 HIRIP3Q9BW71 556 aaPredicted RBP26.56■■□□□ 1.84
COL1A1-206ENST00000485870 MINK1Q8N4C8 1332 aaPredicted RBP26.56■■□□□ 1.84
COL1A1-206ENST00000485870 NBPF1Q3BBV0 1214 aa26.55■■□□□ 1.84
COL1A1-206ENST00000485870 SOS2Q07890 1332 aaPredicted RBP26.55■■□□□ 1.84
COL1A1-206ENST00000485870 ADGRB2O60241 1585 aa26.54■■□□□ 1.84
COL1A1-206ENST00000485870 NUTM2BA6NNL0 878 aaPredicted RBP26.54■■□□□ 1.84
COL1A1-206ENST00000485870 NUTM2EB1AL46 878 aaPredicted RBP26.54■■□□□ 1.84
COL1A1-206ENST00000485870 NUTM2AQ8IVF1 878 aaPredicted RBP26.54■■□□□ 1.84
COL1A1-206ENST00000485870 RGS17Q9UGC6 210 aaPredicted RBP26.54■■□□□ 1.84
COL1A1-206ENST00000485870 RGPD8O14715 1765 aaPredicted RBP26.53■■□□□ 1.84
COL1A1-206ENST00000485870 FOXO3O43524 673 aa26.53■■□□□ 1.84
COL1A1-206ENST00000485870 MEX3CQ5U5Q3 659 aaKnown RBP26.53■■□□□ 1.84
COL1A1-206ENST00000485870 NPHP3Q7Z494 1330 aa26.53■■□□□ 1.84
COL1A1-206ENST00000485870 PNPLA6Q8IY17 1366 aa26.53■■□□□ 1.84
COL1A1-206ENST00000485870 XPCQ01831 940 aaPredicted RBP26.51■■□□□ 1.83
COL1A1-206ENST00000485870 KIF1AQ12756 1690 aa26.5■■□□□ 1.83
COL1A1-206ENST00000485870 PXDNQ92626 1479 aa26.49■■□□□ 1.83
COL1A1-206ENST00000485870 USP32Q8NFA0 1604 aa26.47■■□□□ 1.83
COL1A1-206ENST00000485870 PHF8Q9UPP1 1060 aa26.47■■□□□ 1.83
COL1A1-206ENST00000485870 ANKARQ7Z5J8 1434 aa26.47■■□□□ 1.83
COL1A1-206ENST00000485870 WASLO00401 505 aaPredicted RBP26.45■■□□□ 1.82
COL1A1-206ENST00000485870 TRPM1Q7Z4N2 1603 aa26.44■■□□□ 1.82
COL1A1-206ENST00000485870 EIF3AQ14152 1382 aaKnown RBP26.44■■□□□ 1.82
COL1A1-206ENST00000485870 TULP4Q9NRJ4 1543 aa26.44■■□□□ 1.82
COL1A1-206ENST00000485870 POTEAQ6S8J7 498 aa26.42■■□□□ 1.82
COL1A1-206ENST00000485870 TONSLQ96HA7 1378 aa26.42■■□□□ 1.82
COL1A1-206ENST00000485870 PRR36Q9H6K5 1346 aa26.41■■□□□ 1.82
COL1A1-206ENST00000485870 SOCS7O14512 581 aa26.41■■□□□ 1.82
COL1A1-206ENST00000485870 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
COL1A1-206ENST00000485870 KRT28Q7Z3Y7 464 aa26.4■■□□□ 1.82
COL1A1-206ENST00000485870 COL22A1Q8NFW1 1626 aaPredicted RBP26.39■■□□□ 1.81
COL1A1-206ENST00000485870 ROCK2O75116 1388 aaKnown RBP26.38■■□□□ 1.81
COL1A1-206ENST00000485870 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
COL1A1-206ENST00000485870 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
COL1A1-206ENST00000485870 CENPJQ9HC77 1338 aaPredicted RBP26.38■■□□□ 1.81
COL1A1-206ENST00000485870 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
COL1A1-206ENST00000485870 C8orf37Q96NL8 207 aa26.36■■□□□ 1.81
COL1A1-206ENST00000485870 CDK19Q9BWU1 502 aa26.36■■□□□ 1.81
COL1A1-206ENST00000485870 PSME1Q06323 249 aa26.35■■□□□ 1.81
COL1A1-206ENST00000485870 SPATA31A3Q5VYP0 1347 aa26.35■■□□□ 1.81
COL1A1-206ENST00000485870 ZNF772Q68DY9 489 aaPredicted RBP26.34■■□□□ 1.81
COL1A1-206ENST00000485870 ATP7BP35670 1465 aa26.34■■□□□ 1.81
COL1A1-206ENST00000485870 QRICH2Q9H0J4 1663 aa26.34■■□□□ 1.81
COL1A1-206ENST00000485870 AFF2P51816 1311 aa26.34■■□□□ 1.81
COL1A1-206ENST00000485870 NUDT16Q96DE0 195 aaKnown RBP26.33■■□□□ 1.81
COL1A1-206ENST00000485870 ITSN1Q15811 1721 aa26.32■■□□□ 1.8
COL1A1-206ENST00000485870 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
COL1A1-206ENST00000485870 SBNO1A3KN83 1393 aa26.3■■□□□ 1.8
COL1A1-206ENST00000485870 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
COL1A1-206ENST00000485870 NGDNQ8NEJ9 315 aaKnown RBP26.29■■□□□ 1.8
COL1A1-206ENST00000485870 GPRASP1Q5JY77 1395 aa26.29■■□□□ 1.8
COL1A1-206ENST00000485870 NGLY1Q96IV0 654 aa26.28■■□□□ 1.8
COL1A1-206ENST00000485870 SRPK2P78362 688 aaKnown RBP26.27■■□□□ 1.8
COL1A1-206ENST00000485870 TRPM3Q9HCF6 1732 aaPredicted RBP26.26■■□□□ 1.79
COL1A1-206ENST00000485870 TOPAZ1Q8N9V7 1692 aa26.26■■□□□ 1.79
COL1A1-206ENST00000485870 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
COL1A1-206ENST00000485870 RALGAPBQ86X10 1494 aa26.25■■□□□ 1.79
COL1A1-206ENST00000485870 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
COL1A1-206ENST00000485870 CARD11Q9BXL7 1154 aa26.24■■□□□ 1.79
COL1A1-206ENST00000485870 CABP2Q9NPB3 220 aa26.24■■□□□ 1.79
COL1A1-206ENST00000485870 MARF1Q9Y4F3 1742 aaKnown RBP26.23■■□□□ 1.79
COL1A1-206ENST00000485870 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
COL1A1-206ENST00000485870 CABLES1Q8TDN4 633 aa26.22■■□□□ 1.79
COL1A1-206ENST00000485870 HAP1P54257 671 aaPredicted RBP26.21■■□□□ 1.79
COL1A1-206ENST00000485870 PAK3O75914 559 aaPredicted RBP26.2■■□□□ 1.78
COL1A1-206ENST00000485870 ACEP12821 1306 aa26.19■■□□□ 1.78
COL1A1-206ENST00000485870 ALS2Q96Q42 1657 aa26.19■■□□□ 1.78
COL1A1-206ENST00000485870 RXRBP28702 533 aa26.19■■□□□ 1.78
COL1A1-206ENST00000485870 USP21Q9UK80 565 aa26.19■■□□□ 1.78
COL1A1-206ENST00000485870 EVC2Q86UK5 1308 aa26.18■■□□□ 1.78
COL1A1-206ENST00000485870 PPIP5K1Q6PFW1 1433 aa26.18■■□□□ 1.78
COL1A1-206ENST00000485870 ABCA3Q99758 1704 aa26.18■■□□□ 1.78
COL1A1-206ENST00000485870 QTRT2Q9H974 415 aaKnown RBP26.18■■□□□ 1.78
COL1A1-206ENST00000485870 POLR3AO14802 1390 aaPredicted RBP26.18■■□□□ 1.78
COL1A1-206ENST00000485870 PLEKHG3A1L390 1219 aa26.17■■□□□ 1.78
COL1A1-206ENST00000485870 FNBP4Q8N3X1 1017 aaPredicted RBP26.17■■□□□ 1.78
COL1A1-206ENST00000485870 CLSPNQ9HAW4 1339 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms