RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SIRT1Q96EB6 747 aa27.56■■■□□ 2
SNX17-206ENST00000484886 PRAM1Q96QH2 718 aa27.56■■■□□ 2
SNX17-206ENST00000484886 CDC42BPGQ6DT37 1551 aa27.56■■■□□ 2
SNX17-206ENST00000484886 DLC1Q96QB1 1528 aa27.55■■■□□ 2
SNX17-206ENST00000484886 KIAA1210Q9ULL0 1709 aa27.53■■■□□ 2
SNX17-206ENST00000484886 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
SNX17-206ENST00000484886 DISP3Q9P2K9 1392 aa27.5■■□□□ 1.99
SNX17-206ENST00000484886 AHDC1Q5TGY3 1603 aaPredicted RBP27.5■■□□□ 1.99
SNX17-206ENST00000484886 TONSLQ96HA7 1378 aa27.49■■□□□ 1.99
SNX17-206ENST00000484886 NUTM2FA1L443 756 aa27.49■■□□□ 1.99
SNX17-206ENST00000484886 COL16A1Q07092 1604 aaPredicted RBP27.47■■□□□ 1.99
SNX17-206ENST00000484886 NBPF1Q3BBV0 1214 aa27.46■■□□□ 1.99
SNX17-206ENST00000484886 ORAI2Q96SN7 254 aa27.46■■□□□ 1.99
SNX17-206ENST00000484886 MED1Q15648 1581 aaPredicted RBP27.46■■□□□ 1.99
SNX17-206ENST00000484886 ARHGEF28Q8N1W1 1705 aaKnown RBP27.45■■□□□ 1.99
SNX17-206ENST00000484886 FMN2Q9NZ56 1722 aa27.45■■□□□ 1.99
SNX17-206ENST00000484886 ESCO1Q5FWF5 840 aa27.45■■□□□ 1.98
SNX17-206ENST00000484886 NHSL1Q5SYE7 1610 aa27.45■■□□□ 1.98
SNX17-206ENST00000484886 MINK1Q8N4C8 1332 aaPredicted RBP27.43■■□□□ 1.98
SNX17-206ENST00000484886 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
SNX17-206ENST00000484886 HIRIP3Q9BW71 556 aaPredicted RBP27.43■■□□□ 1.98
SNX17-206ENST00000484886 JCADQ9P266 1359 aa27.43■■□□□ 1.98
SNX17-206ENST00000484886 TRPM1Q7Z4N2 1603 aa27.4■■□□□ 1.98
SNX17-206ENST00000484886 ADGRB2O60241 1585 aa27.39■■□□□ 1.97
SNX17-206ENST00000484886 ROCK2O75116 1388 aaKnown RBP27.37■■□□□ 1.97
SNX17-206ENST00000484886 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
SNX17-206ENST00000484886 NBPF8Q3BBV2 869 aa27.34■■□□□ 1.97
SNX17-206ENST00000484886 LRRC59Q96AG4 307 aaKnown RBP27.34■■□□□ 1.97
SNX17-206ENST00000484886 RGPD8O14715 1765 aaPredicted RBP27.34■■□□□ 1.97
SNX17-206ENST00000484886 NPHP3Q7Z494 1330 aa27.33■■□□□ 1.97
SNX17-206ENST00000484886 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
SNX17-206ENST00000484886 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
SNX17-206ENST00000484886 KIF1AQ12756 1690 aa27.32■■□□□ 1.96
SNX17-206ENST00000484886 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
SNX17-206ENST00000484886 FOXO3O43524 673 aa27.31■■□□□ 1.96
SNX17-206ENST00000484886 XPCQ01831 940 aaPredicted RBP27.3■■□□□ 1.96
SNX17-206ENST00000484886 CENPJQ9HC77 1338 aaPredicted RBP27.3■■□□□ 1.96
SNX17-206ENST00000484886 PHF8Q9UPP1 1060 aa27.29■■□□□ 1.96
SNX17-206ENST00000484886 SPATA31A6Q5VVP1 1343 aa27.29■■□□□ 1.96
SNX17-206ENST00000484886 ANKARQ7Z5J8 1434 aa27.29■■□□□ 1.96
SNX17-206ENST00000484886 SOS2Q07890 1332 aaPredicted RBP27.28■■□□□ 1.96
SNX17-206ENST00000484886 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
SNX17-206ENST00000484886 USP32Q8NFA0 1604 aa27.27■■□□□ 1.96
SNX17-206ENST00000484886 TULP4Q9NRJ4 1543 aa27.27■■□□□ 1.96
SNX17-206ENST00000484886 CLSPNQ9HAW4 1339 aa27.26■■□□□ 1.95
SNX17-206ENST00000484886 NUTM2BA6NNL0 878 aaPredicted RBP27.26■■□□□ 1.95
SNX17-206ENST00000484886 NUTM2EB1AL46 878 aaPredicted RBP27.26■■□□□ 1.95
SNX17-206ENST00000484886 MEX3CQ5U5Q3 659 aaKnown RBP27.26■■□□□ 1.95
SNX17-206ENST00000484886 NUTM2AQ8IVF1 878 aaPredicted RBP27.26■■□□□ 1.95
SNX17-206ENST00000484886 QRICH2Q9H0J4 1663 aa27.26■■□□□ 1.95
SNX17-206ENST00000484886 PXDNQ92626 1479 aa27.24■■□□□ 1.95
SNX17-206ENST00000484886 PNPLA6Q8IY17 1366 aa27.23■■□□□ 1.95
SNX17-206ENST00000484886 PMFBP1Q8TBY8 1022 aa27.23■■□□□ 1.95
SNX17-206ENST00000484886 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
SNX17-206ENST00000484886 CARD11Q9BXL7 1154 aa27.23■■□□□ 1.95
SNX17-206ENST00000484886 RALGAPBQ86X10 1494 aa27.23■■□□□ 1.95
SNX17-206ENST00000484886 PRR36Q9H6K5 1346 aa27.22■■□□□ 1.95
SNX17-206ENST00000484886 LRP6O75581 1613 aa27.21■■□□□ 1.95
SNX17-206ENST00000484886 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
SNX17-206ENST00000484886 KRT28Q7Z3Y7 464 aa27.2■■□□□ 1.94
SNX17-206ENST00000484886 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
SNX17-206ENST00000484886 PSME1Q06323 249 aa27.19■■□□□ 1.94
SNX17-206ENST00000484886 NUDT16Q96DE0 195 aaKnown RBP27.19■■□□□ 1.94
SNX17-206ENST00000484886 SRPK2P78362 688 aaKnown RBP27.18■■□□□ 1.94
SNX17-206ENST00000484886 ATP7BP35670 1465 aa27.18■■□□□ 1.94
SNX17-206ENST00000484886 NGDNQ8NEJ9 315 aaKnown RBP27.16■■□□□ 1.94
SNX17-206ENST00000484886 LMOD2Q6P5Q4 547 aa27.13■■□□□ 1.93
SNX17-206ENST00000484886 ILDR2Q71H61 639 aa27.13■■□□□ 1.93
SNX17-206ENST00000484886 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
SNX17-206ENST00000484886 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
SNX17-206ENST00000484886 SPATA31A3Q5VYP0 1347 aa27.12■■□□□ 1.93
SNX17-206ENST00000484886 EVC2Q86UK5 1308 aa27.12■■□□□ 1.93
SNX17-206ENST00000484886 COL22A1Q8NFW1 1626 aaPredicted RBP27.11■■□□□ 1.93
SNX17-206ENST00000484886 TNS3Q68CZ2 1445 aa27.1■■□□□ 1.93
SNX17-206ENST00000484886 ADAMTS2O95450 1211 aa27.1■■□□□ 1.93
SNX17-206ENST00000484886 CCDC61Q9Y6R9 512 aa27.1■■□□□ 1.93
SNX17-206ENST00000484886 TOPAZ1Q8N9V7 1692 aa27.1■■□□□ 1.93
SNX17-206ENST00000484886 SBNO1A3KN83 1393 aa27.09■■□□□ 1.93
SNX17-206ENST00000484886 PLEKHG5O94827 1062 aa27.08■■□□□ 1.93
SNX17-206ENST00000484886 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
SNX17-206ENST00000484886 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
SNX17-206ENST00000484886 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
SNX17-206ENST00000484886 PAK3O75914 559 aaPredicted RBP27.05■■□□□ 1.92
SNX17-206ENST00000484886 HAP1P54257 671 aaPredicted RBP27.05■■□□□ 1.92
SNX17-206ENST00000484886 ARHGEF10O15013 1369 aa27.04■■□□□ 1.92
SNX17-206ENST00000484886 TRPM3Q9HCF6 1732 aaPredicted RBP27.04■■□□□ 1.92
SNX17-206ENST00000484886 ACEP12821 1306 aa27.03■■□□□ 1.92
SNX17-206ENST00000484886 ZNF772Q68DY9 489 aaPredicted RBP27.02■■□□□ 1.92
SNX17-206ENST00000484886 AFF2P51816 1311 aa27.01■■□□□ 1.91
SNX17-206ENST00000484886 PLEKHG3A1L390 1219 aa27.01■■□□□ 1.91
SNX17-206ENST00000484886 NGLY1Q96IV0 654 aa27.01■■□□□ 1.91
SNX17-206ENST00000484886 SBNO2Q9Y2G9 1366 aa27■■□□□ 1.91
SNX17-206ENST00000484886 POTEAQ6S8J7 498 aa27■■□□□ 1.91
SNX17-206ENST00000484886 POLR3AO14802 1390 aaPredicted RBP26.99■■□□□ 1.91
SNX17-206ENST00000484886 CABLES1Q8TDN4 633 aa26.98■■□□□ 1.91
SNX17-206ENST00000484886 CABP1Q9NZU7 370 aa26.98■■□□□ 1.91
SNX17-206ENST00000484886 ST20-MTHFSA0A0A6YYL1 179 aa26.97■■□□□ 1.91
SNX17-206ENST00000484886 ALS2Q96Q42 1657 aa26.97■■□□□ 1.91
SNX17-206ENST00000484886 USP47Q96K76 1375 aa26.97■■□□□ 1.91
SNX17-206ENST00000484886 MARF1Q9Y4F3 1742 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms