RNA–Protein interactions for RNA: ENST00000484545.1

NELFA-214, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-214ENST00000484545 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
NELFA-214ENST00000484545 LAMC1P11047 1609 aa24.39■■□□□ 1.5
NELFA-214ENST00000484545 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
NELFA-214ENST00000484545 ORAI2Q96SN7 254 aa24.39■■□□□ 1.49
NELFA-214ENST00000484545 KNDC1Q76NI1 1749 aa24.38■■□□□ 1.49
NELFA-214ENST00000484545 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
NELFA-214ENST00000484545 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
NELFA-214ENST00000484545 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
NELFA-214ENST00000484545 SOS2Q07890 1332 aaPredicted RBP24.34■■□□□ 1.49
NELFA-214ENST00000484545 SHPRHQ149N8 1683 aa24.33■■□□□ 1.49
NELFA-214ENST00000484545 ADGRB1O14514 1584 aa24.33■■□□□ 1.48
NELFA-214ENST00000484545 ESCO1Q5FWF5 840 aa24.32■■□□□ 1.48
NELFA-214ENST00000484545 PRAM1Q96QH2 718 aa24.32■■□□□ 1.48
NELFA-214ENST00000484545 DLC1Q96QB1 1528 aa24.3■■□□□ 1.48
NELFA-214ENST00000484545 LRP6O75581 1613 aa24.3■■□□□ 1.48
NELFA-214ENST00000484545 POTEAQ6S8J7 498 aa24.28■■□□□ 1.48
NELFA-214ENST00000484545 POGKQ9P215 609 aa24.28■■□□□ 1.48
NELFA-214ENST00000484545 NPHP3Q7Z494 1330 aa24.28■■□□□ 1.48
NELFA-214ENST00000484545 TRAK1Q9UPV9 953 aa24.27■■□□□ 1.48
NELFA-214ENST00000484545 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
NELFA-214ENST00000484545 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
NELFA-214ENST00000484545 MEX3CQ5U5Q3 659 aaKnown RBP24.25■■□□□ 1.47
NELFA-214ENST00000484545 NUTM2BA6NNL0 878 aaPredicted RBP24.24■■□□□ 1.47
NELFA-214ENST00000484545 NUTM2EB1AL46 878 aaPredicted RBP24.24■■□□□ 1.47
NELFA-214ENST00000484545 FOXO3O43524 673 aa24.24■■□□□ 1.47
NELFA-214ENST00000484545 SAFB2Q14151 953 aaKnown RBP eCLIP24.24■■□□□ 1.47
NELFA-214ENST00000484545 NUTM2AQ8IVF1 878 aaPredicted RBP24.24■■□□□ 1.47
NELFA-214ENST00000484545 FMN2Q9NZ56 1722 aa24.21■■□□□ 1.47
NELFA-214ENST00000484545 ZNF772Q68DY9 489 aaPredicted RBP24.2■■□□□ 1.46
NELFA-214ENST00000484545 PXDNQ92626 1479 aa24.19■■□□□ 1.46
NELFA-214ENST00000484545 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
NELFA-214ENST00000484545 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
NELFA-214ENST00000484545 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
NELFA-214ENST00000484545 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
NELFA-214ENST00000484545 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
NELFA-214ENST00000484545 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
NELFA-214ENST00000484545 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
NELFA-214ENST00000484545 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.46
NELFA-214ENST00000484545 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.45
NELFA-214ENST00000484545 NBPF1Q3BBV0 1214 aa24.14■■□□□ 1.45
NELFA-214ENST00000484545 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.45
NELFA-214ENST00000484545 KRT28Q7Z3Y7 464 aa24.13■■□□□ 1.45
NELFA-214ENST00000484545 KIF1AQ12756 1690 aa24.13■■□□□ 1.45
NELFA-214ENST00000484545 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
NELFA-214ENST00000484545 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
NELFA-214ENST00000484545 AFF2P51816 1311 aa24.11■■□□□ 1.45
NELFA-214ENST00000484545 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
NELFA-214ENST00000484545 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
NELFA-214ENST00000484545 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
NELFA-214ENST00000484545 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
NELFA-214ENST00000484545 C8orf37Q96NL8 207 aa24.1■■□□□ 1.45
NELFA-214ENST00000484545 PSME1Q06323 249 aa24.09■■□□□ 1.45
NELFA-214ENST00000484545 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
NELFA-214ENST00000484545 NGLY1Q96IV0 654 aa24.07■■□□□ 1.44
NELFA-214ENST00000484545 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
NELFA-214ENST00000484545 TULP4Q9NRJ4 1543 aa24.06■■□□□ 1.44
NELFA-214ENST00000484545 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
NELFA-214ENST00000484545 ARHGEF28Q8N1W1 1705 aaKnown RBP24.06■■□□□ 1.44
NELFA-214ENST00000484545 SBNO1A3KN83 1393 aa24.05■■□□□ 1.44
NELFA-214ENST00000484545 RXRBP28702 533 aa24.05■■□□□ 1.44
NELFA-214ENST00000484545 FNBP4Q8N3X1 1017 aaPredicted RBP24.05■■□□□ 1.44
NELFA-214ENST00000484545 RGPD8O14715 1765 aaPredicted RBP24.04■■□□□ 1.44
NELFA-214ENST00000484545 NUDT16Q96DE0 195 aaKnown RBP24.02■■□□□ 1.44
NELFA-214ENST00000484545 CDK19Q9BWU1 502 aa24.02■■□□□ 1.44
NELFA-214ENST00000484545 QTRT2Q9H974 415 aaKnown RBP24.02■■□□□ 1.44
NELFA-214ENST00000484545 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
NELFA-214ENST00000484545 USP21Q9UK80 565 aa23.99■■□□□ 1.43
NELFA-214ENST00000484545 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
NELFA-214ENST00000484545 GPRASP1Q5JY77 1395 aa23.99■■□□□ 1.43
NELFA-214ENST00000484545 RBM6P78332 1123 aaKnown RBP23.98■■□□□ 1.43
NELFA-214ENST00000484545 ARHGEF10O15013 1369 aa23.98■■□□□ 1.43
NELFA-214ENST00000484545 CDK12Q9NYV4 1490 aaPredicted RBP23.98■■□□□ 1.43
NELFA-214ENST00000484545 ATP7BP35670 1465 aa23.97■■□□□ 1.43
NELFA-214ENST00000484545 NGDNQ8NEJ9 315 aaKnown RBP23.97■■□□□ 1.43
NELFA-214ENST00000484545 CCDC61Q9Y6R9 512 aa23.96■■□□□ 1.43
NELFA-214ENST00000484545 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
NELFA-214ENST00000484545 LMOD2Q6P5Q4 547 aa23.94■■□□□ 1.42
NELFA-214ENST00000484545 TRPC5Q9UL62 973 aaPredicted RBP23.94■■□□□ 1.42
NELFA-214ENST00000484545 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
NELFA-214ENST00000484545 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
NELFA-214ENST00000484545 BCL9LQ86UU0 1499 aa23.93■■□□□ 1.42
NELFA-214ENST00000484545 ROCK2O75116 1388 aaKnown RBP23.92■■□□□ 1.42
NELFA-214ENST00000484545 CABLES1Q8TDN4 633 aa23.92■■□□□ 1.42
NELFA-214ENST00000484545 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
NELFA-214ENST00000484545 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
NELFA-214ENST00000484545 ATRNO75882 1429 aa23.9■■□□□ 1.42
NELFA-214ENST00000484545 TRPM3Q9HCF6 1732 aaPredicted RBP23.89■■□□□ 1.41
NELFA-214ENST00000484545 TONSLQ96HA7 1378 aa23.89■■□□□ 1.41
NELFA-214ENST00000484545 ACEP12821 1306 aa23.88■■□□□ 1.41
NELFA-214ENST00000484545 SRPK2P78362 688 aaKnown RBP23.88■■□□□ 1.41
NELFA-214ENST00000484545 SLIT2O94813 1529 aa23.88■■□□□ 1.41
NELFA-214ENST00000484545 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
NELFA-214ENST00000484545 UNC5CLQ8IV45 518 aa23.87■■□□□ 1.41
NELFA-214ENST00000484545 ITSN1Q15811 1721 aa23.87■■□□□ 1.41
NELFA-214ENST00000484545 CABP2Q9NPB3 220 aa23.86■■□□□ 1.41
NELFA-214ENST00000484545 RGS12O14924 1447 aa23.85■■□□□ 1.41
NELFA-214ENST00000484545 PAK3O75914 559 aaPredicted RBP23.85■■□□□ 1.41
NELFA-214ENST00000484545 ALS2Q96Q42 1657 aa23.84■■□□□ 1.41
NELFA-214ENST00000484545 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
NELFA-214ENST00000484545 TOPAZ1Q8N9V7 1692 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms