RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 TRAK1Q9UPV9 953 aa38.3■■■■□ 3.72
SMDT1-203ENST00000484235 PLEKHH1Q9ULM0 1364 aa38.3■■■■□ 3.72
SMDT1-203ENST00000484235 JCADQ9P266 1359 aa38.29■■■■□ 3.72
SMDT1-203ENST00000484235 PRAM1Q96QH2 718 aa38.28■■■■□ 3.72
SMDT1-203ENST00000484235 TONSLQ96HA7 1378 aa38.28■■■■□ 3.72
SMDT1-203ENST00000484235 NALCNQ8IZF0 1738 aa38.27■■■■□ 3.72
SMDT1-203ENST00000484235 PHLPP1O60346 1717 aa38.26■■■■□ 3.72
SMDT1-203ENST00000484235 POGKQ9P215 609 aa38.26■■■■□ 3.72
SMDT1-203ENST00000484235 DLC1Q96QB1 1528 aa38.26■■■■□ 3.72
SMDT1-203ENST00000484235 NBPF1Q3BBV0 1214 aa38.25■■■■□ 3.71
SMDT1-203ENST00000484235 CLSPNQ9HAW4 1339 aa38.25■■■■□ 3.71
SMDT1-203ENST00000484235 KIAA1210Q9ULL0 1709 aa38.24■■■■□ 3.71
SMDT1-203ENST00000484235 MST1RQ04912 1400 aa38.23■■■■□ 3.71
SMDT1-203ENST00000484235 COL16A1Q07092 1604 aaPredicted RBP38.23■■■■□ 3.71
SMDT1-203ENST00000484235 SAFB2Q14151 953 aaKnown RBP eCLIP38.18■■■■□ 3.7
SMDT1-203ENST00000484235 BRINP3Q76B58 766 aa38.18■■■■□ 3.7
SMDT1-203ENST00000484235 C1orf167Q5SNV9 1468 aa38.14■■■■□ 3.7
SMDT1-203ENST00000484235 CDC42BPGQ6DT37 1551 aa38.14■■■■□ 3.7
SMDT1-203ENST00000484235 NBPF8Q3BBV2 869 aa38.13■■■■□ 3.69
SMDT1-203ENST00000484235 CCER1Q8TC90 406 aaPredicted RBP38.13■■■■□ 3.69
SMDT1-203ENST00000484235 AHDC1Q5TGY3 1603 aaPredicted RBP38.12■■■■□ 3.69
SMDT1-203ENST00000484235 LRP6O75581 1613 aa38.1■■■■□ 3.69
SMDT1-203ENST00000484235 SPATA31A6Q5VVP1 1343 aa38.1■■■■□ 3.69
SMDT1-203ENST00000484235 ORAI2Q96SN7 254 aa38.06■■■■□ 3.68
SMDT1-203ENST00000484235 TIMELESSQ9UNS1 1208 aa38.06■■■■□ 3.68
SMDT1-203ENST00000484235 ROCK2O75116 1388 aaKnown RBP38.06■■■■□ 3.68
SMDT1-203ENST00000484235 MINK1Q8N4C8 1332 aaPredicted RBP38.05■■■■□ 3.68
SMDT1-203ENST00000484235 TRPM1Q7Z4N2 1603 aa38.04■■■■□ 3.68
SMDT1-203ENST00000484235 NUTM2FA1L443 756 aa38.03■■■■□ 3.68
SMDT1-203ENST00000484235 ESCO1Q5FWF5 840 aa38.02■■■■□ 3.68
SMDT1-203ENST00000484235 HIRIP3Q9BW71 556 aaPredicted RBP38.02■■■■□ 3.68
SMDT1-203ENST00000484235 ARHGEF28Q8N1W1 1705 aaKnown RBP38■■■■□ 3.67
SMDT1-203ENST00000484235 WASLO00401 505 aaPredicted RBP37.97■■■■□ 3.67
SMDT1-203ENST00000484235 SHPRHQ149N8 1683 aa37.97■■■■□ 3.67
SMDT1-203ENST00000484235 GPRASP1Q5JY77 1395 aa37.96■■■■□ 3.67
SMDT1-203ENST00000484235 CENPJQ9HC77 1338 aaPredicted RBP37.95■■■■□ 3.67
SMDT1-203ENST00000484235 ADGRB2O60241 1585 aa37.95■■■■□ 3.67
SMDT1-203ENST00000484235 FMN2Q9NZ56 1722 aa37.95■■■■□ 3.67
SMDT1-203ENST00000484235 DDX17Q92841 729 aaKnown RBP37.93■■■■□ 3.66
SMDT1-203ENST00000484235 CARD11Q9BXL7 1154 aa37.92■■■■□ 3.66
SMDT1-203ENST00000484235 ZNF772Q68DY9 489 aaPredicted RBP37.91■■■■□ 3.66
SMDT1-203ENST00000484235 EIF3AQ14152 1382 aaKnown RBP37.91■■■■□ 3.66
SMDT1-203ENST00000484235 RALGAPBQ86X10 1494 aa37.9■■■■□ 3.66
SMDT1-203ENST00000484235 MEX3CQ5U5Q3 659 aaKnown RBP37.9■■■■□ 3.66
SMDT1-203ENST00000484235 ANKARQ7Z5J8 1434 aa37.88■■■■□ 3.66
SMDT1-203ENST00000484235 LRRC59Q96AG4 307 aaKnown RBP37.88■■■■□ 3.65
SMDT1-203ENST00000484235 NHSL1Q5SYE7 1610 aa37.87■■■■□ 3.65
SMDT1-203ENST00000484235 FOXO3O43524 673 aa37.87■■■■□ 3.65
SMDT1-203ENST00000484235 NPHP3Q7Z494 1330 aa37.87■■■■□ 3.65
SMDT1-203ENST00000484235 CDK19Q9BWU1 502 aa37.86■■■■□ 3.65
SMDT1-203ENST00000484235 SOS2Q07890 1332 aaPredicted RBP37.86■■■■□ 3.65
SMDT1-203ENST00000484235 PHF8Q9UPP1 1060 aa37.85■■■■□ 3.65
SMDT1-203ENST00000484235 NUTM2BA6NNL0 878 aaPredicted RBP37.81■■■■□ 3.64
SMDT1-203ENST00000484235 NUTM2EB1AL46 878 aaPredicted RBP37.81■■■■□ 3.64
SMDT1-203ENST00000484235 NUTM2AQ8IVF1 878 aaPredicted RBP37.81■■■■□ 3.64
SMDT1-203ENST00000484235 PRR36Q9H6K5 1346 aa37.81■■■■□ 3.64
SMDT1-203ENST00000484235 TULP4Q9NRJ4 1543 aa37.81■■■■□ 3.64
SMDT1-203ENST00000484235 NUDT16Q96DE0 195 aaKnown RBP37.79■■■■□ 3.64
SMDT1-203ENST00000484235 USP32Q8NFA0 1604 aa37.76■■■■□ 3.63
SMDT1-203ENST00000484235 PMFBP1Q8TBY8 1022 aa37.75■■■■□ 3.63
SMDT1-203ENST00000484235 RGPD8O14715 1765 aaPredicted RBP37.73■■■■□ 3.63
SMDT1-203ENST00000484235 KIF1AQ12756 1690 aa37.73■■■■□ 3.63
SMDT1-203ENST00000484235 PNPLA6Q8IY17 1366 aa37.73■■■■□ 3.63
SMDT1-203ENST00000484235 RXRBP28702 533 aa37.73■■■■□ 3.63
SMDT1-203ENST00000484235 XPCQ01831 940 aaPredicted RBP37.73■■■■□ 3.63
SMDT1-203ENST00000484235 UPF1Q92900 1129 aaKnown RBP eCLIP37.73■■■■□ 3.63
SMDT1-203ENST00000484235 SRPK2P78362 688 aaKnown RBP37.72■■■■□ 3.63
SMDT1-203ENST00000484235 KRT28Q7Z3Y7 464 aa37.72■■■■□ 3.63
SMDT1-203ENST00000484235 QRICH2Q9H0J4 1663 aa37.72■■■■□ 3.63
SMDT1-203ENST00000484235 PXDNQ92626 1479 aa37.71■■■■□ 3.63
SMDT1-203ENST00000484235 AFF2P51816 1311 aa37.71■■■■□ 3.63
SMDT1-203ENST00000484235 EVC2Q86UK5 1308 aa37.71■■■■□ 3.63
SMDT1-203ENST00000484235 PSME1Q06323 249 aa37.71■■■■□ 3.63
SMDT1-203ENST00000484235 CCDC61Q9Y6R9 512 aa37.71■■■■□ 3.63
SMDT1-203ENST00000484235 ATP7BP35670 1465 aa37.69■■■■□ 3.62
SMDT1-203ENST00000484235 CABP2Q9NPB3 220 aa37.68■■■■□ 3.62
SMDT1-203ENST00000484235 CDK12Q9NYV4 1490 aaPredicted RBP37.66■■■■□ 3.62
SMDT1-203ENST00000484235 SBNO2Q9Y2G9 1366 aa37.66■■■■□ 3.62
SMDT1-203ENST00000484235 NGDNQ8NEJ9 315 aaKnown RBP37.65■■■■□ 3.62
SMDT1-203ENST00000484235 PLEKHG3A1L390 1219 aa37.62■■■■□ 3.61
SMDT1-203ENST00000484235 SPATA31A3Q5VYP0 1347 aa37.61■■■■□ 3.61
SMDT1-203ENST00000484235 ST20-MTHFSA0A0A6YYL1 179 aa37.6■■■■□ 3.61
SMDT1-203ENST00000484235 C8orf37Q96NL8 207 aa37.6■■■■□ 3.61
SMDT1-203ENST00000484235 SBNO1A3KN83 1393 aa37.58■■■■□ 3.61
SMDT1-203ENST00000484235 SLC24A1O60721 1099 aa37.57■■■■□ 3.6
SMDT1-203ENST00000484235 ITSN1Q15811 1721 aa37.56■■■■□ 3.6
SMDT1-203ENST00000484235 QTRT2Q9H974 415 aaKnown RBP37.56■■■■□ 3.6
SMDT1-203ENST00000484235 ACEP12821 1306 aa37.55■■■■□ 3.6
SMDT1-203ENST00000484235 USP47Q96K76 1375 aa37.55■■■■□ 3.6
SMDT1-203ENST00000484235 POLR3AO14802 1390 aaPredicted RBP37.54■■■■□ 3.6
SMDT1-203ENST00000484235 PPIP5K1Q6PFW1 1433 aa37.53■■■■□ 3.6
SMDT1-203ENST00000484235 TESK2Q96S53 571 aa37.53■■■■□ 3.6
SMDT1-203ENST00000484235 CABP1Q9NZU7 370 aa37.53■■■■□ 3.6
SMDT1-203ENST00000484235 RBM6P78332 1123 aaKnown RBP37.52■■■■□ 3.6
SMDT1-203ENST00000484235 TNS3Q68CZ2 1445 aa37.51■■■■□ 3.59
SMDT1-203ENST00000484235 TOPAZ1Q8N9V7 1692 aa37.5■■■■□ 3.59
SMDT1-203ENST00000484235 ADAMTS2O95450 1211 aa37.5■■■■□ 3.59
SMDT1-203ENST00000484235 RGS12O14924 1447 aa37.48■■■■□ 3.59
SMDT1-203ENST00000484235 ATAD2Q6PL18 1390 aa37.48■■■■□ 3.59
SMDT1-203ENST00000484235 LMOD2Q6P5Q4 547 aa37.48■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms