RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 YTHDC2Q9H6S0 1430 aaKnown RBP11.96□□□□□ -0.5
CDC42SE1-204ENST00000483763 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
CDC42SE1-204ENST00000483763 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
CDC42SE1-204ENST00000483763 PPP2R1AP30153 589 aa11.94□□□□□ -0.5
CDC42SE1-204ENST00000483763 EVC2Q86UK5 1308 aa11.93□□□□□ -0.5
CDC42SE1-204ENST00000483763 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-204ENST00000483763 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
CDC42SE1-204ENST00000483763 WAPLQ7Z5K2 1190 aa11.92□□□□□ -0.5
CDC42SE1-204ENST00000483763 METP08581 1390 aa11.92□□□□□ -0.5
CDC42SE1-204ENST00000483763 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
CDC42SE1-204ENST00000483763 LTKP29376 864 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 FKBP8Q14318 412 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 POGKQ9P215 609 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 NRXN3Q9Y4C0 1643 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 PLEKHH1Q9ULM0 1364 aa11.91□□□□□ -0.5
CDC42SE1-204ENST00000483763 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC42SE1-204ENST00000483763 BCANQ96GW7 911 aa11.9□□□□□ -0.5
CDC42SE1-204ENST00000483763 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.5
CDC42SE1-204ENST00000483763 NLRP1Q9C000 1473 aa11.9□□□□□ -0.5
CDC42SE1-204ENST00000483763 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
CDC42SE1-204ENST00000483763 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.51
CDC42SE1-204ENST00000483763 SETD1AO15047 1707 aaKnown RBP11.9□□□□□ -0.51
CDC42SE1-204ENST00000483763 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-204ENST00000483763 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-204ENST00000483763 ADAMTS8Q9UP79 889 aa11.89□□□□□ -0.51
CDC42SE1-204ENST00000483763 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-204ENST00000483763 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-204ENST00000483763 TXNDC2Q86VQ3 553 aa11.87□□□□□ -0.51
CDC42SE1-204ENST00000483763 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
CDC42SE1-204ENST00000483763 CDK19Q9BWU1 502 aa11.87□□□□□ -0.51
CDC42SE1-204ENST00000483763 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-204ENST00000483763 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-204ENST00000483763 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-204ENST00000483763 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-204ENST00000483763 ANKRD36BQ8N2N9 1353 aa11.86□□□□□ -0.51
CDC42SE1-204ENST00000483763 ADAMTS13Q76LX8 1427 aa11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 THEMISQ8N1K5 641 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
CDC42SE1-204ENST00000483763 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
CDC42SE1-204ENST00000483763 CD163L1Q9NR16 1453 aa11.84□□□□□ -0.51
CDC42SE1-204ENST00000483763 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
CDC42SE1-204ENST00000483763 DLC1Q96QB1 1528 aa11.84□□□□□ -0.51
CDC42SE1-204ENST00000483763 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
CDC42SE1-204ENST00000483763 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
CDC42SE1-204ENST00000483763 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-204ENST00000483763 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-204ENST00000483763 CGNL1Q0VF96 1302 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 NEFLP07196 543 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
CDC42SE1-204ENST00000483763 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
CDC42SE1-204ENST00000483763 TECPR2O15040 1411 aa11.81□□□□□ -0.52
CDC42SE1-204ENST00000483763 ARHGAP23Q9P227 1491 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 SLIT1O75093 1534 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 WASLO00401 505 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 INSRP06213 1382 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 MED14O60244 1454 aa11.8□□□□□ -0.52
CDC42SE1-204ENST00000483763 FYB1O15117 783 aa11.79□□□□□ -0.52
CDC42SE1-204ENST00000483763 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
CDC42SE1-204ENST00000483763 PTPRUQ92729 1446 aa11.79□□□□□ -0.52
CDC42SE1-204ENST00000483763 MTHFSP49914 203 aa11.79□□□□□ -0.52
CDC42SE1-204ENST00000483763 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
CDC42SE1-204ENST00000483763 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
CDC42SE1-204ENST00000483763 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
CDC42SE1-204ENST00000483763 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
CDC42SE1-204ENST00000483763 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
CDC42SE1-204ENST00000483763 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-204ENST00000483763 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-204ENST00000483763 CPS1P31327 1500 aa11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 FBLN1P23142 703 aa11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 AMOTL2Q9Y2J4 779 aa11.76□□□□□ -0.53
CDC42SE1-204ENST00000483763 NSD2O96028 1365 aa11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 NUTM2FA1L443 756 aa11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 APAF1O14727 1248 aa11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 KNDC1Q76NI1 1749 aa11.75□□□□□ -0.53
CDC42SE1-204ENST00000483763 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 RNF123Q5XPI4 1314 aa11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 NPHP4O75161 1426 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
CDC42SE1-204ENST00000483763 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-204ENST00000483763 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
CDC42SE1-204ENST00000483763 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
CDC42SE1-204ENST00000483763 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms