RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 POLR3GLQ9BT43 218 aa26.45■■□□□ 1.82
PCCB-216ENST00000483687 NWD1Q149M9 1564 aa26.44■■□□□ 1.82
PCCB-216ENST00000483687 MINK1Q8N4C8 1332 aaPredicted RBP26.44■■□□□ 1.82
PCCB-216ENST00000483687 DMRT2Q9Y5R5 561 aa26.42■■□□□ 1.82
PCCB-216ENST00000483687 CDCA8Q53HL2 280 aa26.41■■□□□ 1.82
PCCB-216ENST00000483687 EVC2Q86UK5 1308 aa26.39■■□□□ 1.82
PCCB-216ENST00000483687 TULP4Q9NRJ4 1543 aa26.39■■□□□ 1.82
PCCB-216ENST00000483687 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.38■■□□□ 1.81
PCCB-216ENST00000483687 STRCP1A6NGW2 1772 aa26.37■■□□□ 1.81
PCCB-216ENST00000483687 DDX10Q13206 875 aaKnown RBP26.36■■□□□ 1.81
PCCB-216ENST00000483687 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
PCCB-216ENST00000483687 ADGRB2O60241 1585 aa26.33■■□□□ 1.81
PCCB-216ENST00000483687 SRPK2P78362 688 aaKnown RBP26.31■■□□□ 1.8
PCCB-216ENST00000483687 PROSER2Q86WR7 435 aaPredicted RBP26.31■■□□□ 1.8
PCCB-216ENST00000483687 CDK19Q9BWU1 502 aa26.31■■□□□ 1.8
PCCB-216ENST00000483687 RBM33Q96EV2 1170 aaKnown RBP26.3■■□□□ 1.8
PCCB-216ENST00000483687 CABP2Q9NPB3 220 aa26.3■■□□□ 1.8
PCCB-216ENST00000483687 WASLO00401 505 aaPredicted RBP26.29■■□□□ 1.8
PCCB-216ENST00000483687 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
PCCB-216ENST00000483687 NALCNQ8IZF0 1738 aa26.29■■□□□ 1.8
PCCB-216ENST00000483687 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
PCCB-216ENST00000483687 PUS7Q96PZ0 661 aaKnown RBP26.28■■□□□ 1.8
PCCB-216ENST00000483687 MYOM1P52179 1685 aa26.27■■□□□ 1.8
PCCB-216ENST00000483687 ADGRL3Q9HAR2 1447 aa26.25■■□□□ 1.79
PCCB-216ENST00000483687 C14orf37Q86TY3 774 aa26.25■■□□□ 1.79
PCCB-216ENST00000483687 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
PCCB-216ENST00000483687 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
PCCB-216ENST00000483687 TMC1Q8TDI8 760 aa26.21■■□□□ 1.79
PCCB-216ENST00000483687 CDC42BPGQ6DT37 1551 aa26.21■■□□□ 1.79
PCCB-216ENST00000483687 NCOA3Q9Y6Q9 1424 aa26.19■■□□□ 1.78
PCCB-216ENST00000483687 FMN2Q9NZ56 1722 aa26.18■■□□□ 1.78
PCCB-216ENST00000483687 LRRC7Q96NW7 1537 aa26.18■■□□□ 1.78
PCCB-216ENST00000483687 NUDT16Q96DE0 195 aaKnown RBP26.17■■□□□ 1.78
PCCB-216ENST00000483687 XIRP1Q702N8 1843 aaKnown RBP26.17■■□□□ 1.78
PCCB-216ENST00000483687 ATP7BP35670 1465 aa26.17■■□□□ 1.78
PCCB-216ENST00000483687 NINLQ9Y2I6 1382 aa26.17■■□□□ 1.78
PCCB-216ENST00000483687 NUTM2FA1L443 756 aa26.17■■□□□ 1.78
PCCB-216ENST00000483687 SLC12A5Q9H2X9 1139 aa26.17■■□□□ 1.78
PCCB-216ENST00000483687 PANK3Q9H999 370 aa26.17■■□□□ 1.78
PCCB-216ENST00000483687 C19orf44Q9H6X5 657 aa26.15■■□□□ 1.78
PCCB-216ENST00000483687 PRR36Q9H6K5 1346 aa26.15■■□□□ 1.78
PCCB-216ENST00000483687 USP32Q8NFA0 1604 aa26.14■■□□□ 1.77
PCCB-216ENST00000483687 CCDC61Q9Y6R9 512 aa26.14■■□□□ 1.77
PCCB-216ENST00000483687 RGPD8O14715 1765 aaPredicted RBP26.13■■□□□ 1.77
PCCB-216ENST00000483687 TOPAZ1Q8N9V7 1692 aa26.12■■□□□ 1.77
PCCB-216ENST00000483687 PPIP5K1Q6PFW1 1433 aa26.12■■□□□ 1.77
PCCB-216ENST00000483687 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
PCCB-216ENST00000483687 ITSN1Q15811 1721 aa26.12■■□□□ 1.77
PCCB-216ENST00000483687 ANKARQ7Z5J8 1434 aa26.12■■□□□ 1.77
PCCB-216ENST00000483687 MSH6P52701 1360 aa26.11■■□□□ 1.77
PCCB-216ENST00000483687 ANKRD36BQ8N2N9 1353 aa26.09■■□□□ 1.77
PCCB-216ENST00000483687 DCCP43146 1447 aa26.09■■□□□ 1.77
PCCB-216ENST00000483687 ATF3P18847 181 aa26.08■■□□□ 1.76
PCCB-216ENST00000483687 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
PCCB-216ENST00000483687 TERF2IPQ9NYB0 399 aa26.07■■□□□ 1.76
PCCB-216ENST00000483687 A0A1W2PP64 1363 aa26.06■■□□□ 1.76
PCCB-216ENST00000483687 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
PCCB-216ENST00000483687 PER1O15534 1290 aaPredicted RBP26.05■■□□□ 1.76
PCCB-216ENST00000483687 HDGFL2Q7Z4V5 671 aaPredicted RBP26.05■■□□□ 1.76
PCCB-216ENST00000483687 CADPS2Q86UW7 1296 aa26.04■■□□□ 1.76
PCCB-216ENST00000483687 KNSTRNQ9Y448 316 aa26.04■■□□□ 1.76
PCCB-216ENST00000483687 CARD14Q9BXL6 1004 aa26.02■■□□□ 1.76
PCCB-216ENST00000483687 PLEKHG3A1L390 1219 aa26.02■■□□□ 1.76
PCCB-216ENST00000483687 ANP32CO43423 234 aa26.01■■□□□ 1.75
PCCB-216ENST00000483687 AKAP12Q02952 1782 aa26.01■■□□□ 1.75
PCCB-216ENST00000483687 NSD3Q9BZ95 1437 aa26.01■■□□□ 1.75
PCCB-216ENST00000483687 PMFBP1Q8TBY8 1022 aa26■■□□□ 1.75
PCCB-216ENST00000483687 MST1RQ04912 1400 aa26■■□□□ 1.75
PCCB-216ENST00000483687 CPSF1Q10570 1443 aaKnown RBP26■■□□□ 1.75
PCCB-216ENST00000483687 C1orf167Q5SNV9 1468 aa25.99■■□□□ 1.75
PCCB-216ENST00000483687 ACEP12821 1306 aa25.99■■□□□ 1.75
PCCB-216ENST00000483687 CNGB1Q14028 1251 aaPredicted RBP25.99■■□□□ 1.75
PCCB-216ENST00000483687 ESCO1Q5FWF5 840 aa25.99■■□□□ 1.75
PCCB-216ENST00000483687 KTN1Q86UP2 1357 aaKnown RBP25.98■■□□□ 1.75
PCCB-216ENST00000483687 MON2Q7Z3U7 1717 aa25.97■■□□□ 1.75
PCCB-216ENST00000483687 NGDNQ8NEJ9 315 aaKnown RBP25.97■■□□□ 1.75
PCCB-216ENST00000483687 ZNF692Q9BU19 519 aaPredicted RBP25.97■■□□□ 1.75
PCCB-216ENST00000483687 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
PCCB-216ENST00000483687 POLR3AO14802 1390 aaPredicted RBP25.96■■□□□ 1.75
PCCB-216ENST00000483687 MIER1Q8N108 512 aa25.94■■□□□ 1.74
PCCB-216ENST00000483687 ORAI2Q96SN7 254 aa25.94■■□□□ 1.74
PCCB-216ENST00000483687 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
PCCB-216ENST00000483687 CC2D1BQ5T0F9 858 aaKnown RBP25.94■■□□□ 1.74
PCCB-216ENST00000483687 CGNL1Q0VF96 1302 aa25.93■■□□□ 1.74
PCCB-216ENST00000483687 PRKRIP1Q9H875 184 aaPredicted RBP25.92■■□□□ 1.74
PCCB-216ENST00000483687 KIF1AQ12756 1690 aa25.92■■□□□ 1.74
PCCB-216ENST00000483687 EDC4Q6P2E9 1401 aaKnown RBP25.92■■□□□ 1.74
PCCB-216ENST00000483687 USP6P35125 1406 aa25.91■■□□□ 1.74
PCCB-216ENST00000483687 NPC1L1Q9UHC9 1359 aa25.91■■□□□ 1.74
PCCB-216ENST00000483687 SLAIN2Q9P270 581 aa25.89■■□□□ 1.74
PCCB-216ENST00000483687 NRKQ7Z2Y5 1582 aa25.89■■□□□ 1.74
PCCB-216ENST00000483687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.88■■□□□ 1.73
PCCB-216ENST00000483687 KIF20BQ96Q89 1820 aa25.88■■□□□ 1.73
PCCB-216ENST00000483687 NSD2O96028 1365 aa25.85■■□□□ 1.73
PCCB-216ENST00000483687 FOXO3O43524 673 aa25.85■■□□□ 1.73
PCCB-216ENST00000483687 RALBP1Q15311 655 aa25.85■■□□□ 1.73
PCCB-216ENST00000483687 PARD3Q8TEW0 1356 aa25.85■■□□□ 1.73
PCCB-216ENST00000483687 PSME1Q06323 249 aa25.84■■□□□ 1.73
PCCB-216ENST00000483687 TTC21BQ7Z4L5 1316 aa25.84■■□□□ 1.73
PCCB-216ENST00000483687 FYB1O15117 783 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms