RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
COMMD6-210ENST00000483290 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
COMMD6-210ENST00000483290 TRIM32Q13049 653 aa9.66□□□□□ -0.86
COMMD6-210ENST00000483290 HIC1Q14526 733 aa9.66□□□□□ -0.86
COMMD6-210ENST00000483290 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
COMMD6-210ENST00000483290 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
COMMD6-210ENST00000483290 MRGPRX2Q96LB1 330 aa9.65□□□□□ -0.86
COMMD6-210ENST00000483290 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
COMMD6-210ENST00000483290 FECHP22830 423 aa9.64□□□□□ -0.87
COMMD6-210ENST00000483290 BRICD5Q6PL45 260 aa9.64□□□□□ -0.87
COMMD6-210ENST00000483290 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
COMMD6-210ENST00000483290 J3QL48 77 aa9.63□□□□□ -0.87
COMMD6-210ENST00000483290 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
COMMD6-210ENST00000483290 GCGRP47871 477 aa9.62□□□□□ -0.87
COMMD6-210ENST00000483290 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
COMMD6-210ENST00000483290 Q3C1V9 767 aa9.61□□□□□ -0.87
COMMD6-210ENST00000483290 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
COMMD6-210ENST00000483290 ZSCAN1Q8NBB4 408 aa9.61□□□□□ -0.87
COMMD6-210ENST00000483290 HPS1Q92902 700 aa9.6□□□□□ -0.87
COMMD6-210ENST00000483290 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
COMMD6-210ENST00000483290 RNF19BQ6ZMZ0 732 aa9.59□□□□□ -0.87
COMMD6-210ENST00000483290 IRF7Q92985 503 aa9.59□□□□□ -0.87
COMMD6-210ENST00000483290 P3H3Q8IVL6 736 aa9.58□□□□□ -0.88
COMMD6-210ENST00000483290 NPAS3Q8IXF0 933 aa9.57□□□□□ -0.88
COMMD6-210ENST00000483290 MMP16P51512 607 aa9.56□□□□□ -0.88
COMMD6-210ENST00000483290 GNPATO15228 680 aa9.55□□□□□ -0.88
COMMD6-210ENST00000483290 GMPRP36959 345 aa9.55□□□□□ -0.88
COMMD6-210ENST00000483290 WNT7BP56706 349 aa9.54□□□□□ -0.88
COMMD6-210ENST00000483290 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
COMMD6-210ENST00000483290 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
COMMD6-210ENST00000483290 ARXQ96QS3 562 aa9.54□□□□□ -0.88
COMMD6-210ENST00000483290 LOC100996750A0A140TA64 210 aa9.53□□□□□ -0.88
COMMD6-210ENST00000483290 KRTAP4-6Q9BYQ5 205 aa9.53□□□□□ -0.88
COMMD6-210ENST00000483290 SEMA3EO15041 775 aa9.52□□□□□ -0.89
COMMD6-210ENST00000483290 ALDH1A1P00352 501 aa9.52□□□□□ -0.89
COMMD6-210ENST00000483290 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
COMMD6-210ENST00000483290 USB1Q9BQ65 265 aaKnown RBP9.51□□□□□ -0.89
COMMD6-210ENST00000483290 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
COMMD6-210ENST00000483290 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
COMMD6-210ENST00000483290 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
COMMD6-210ENST00000483290 RANGAP1P46060 587 aaPredicted RBP9.48□□□□□ -0.89
COMMD6-210ENST00000483290 WASF2Q9Y6W5 498 aa9.48□□□□□ -0.89
COMMD6-210ENST00000483290 H3BM21 787 aa9.47□□□□□ -0.89
COMMD6-210ENST00000483290 SKOR1P84550 965 aa9.47□□□□□ -0.89
COMMD6-210ENST00000483290 BMP1P13497 986 aa9.46□□□□□ -0.9
COMMD6-210ENST00000483290 VEGFBP49765 207 aa9.46□□□□□ -0.9
COMMD6-210ENST00000483290 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
COMMD6-210ENST00000483290 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
COMMD6-210ENST00000483290 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
COMMD6-210ENST00000483290 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
COMMD6-210ENST00000483290 KDM4AO75164 1064 aa9.43□□□□□ -0.9
COMMD6-210ENST00000483290 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
COMMD6-210ENST00000483290 USP46P62068 366 aa9.41□□□□□ -0.9
COMMD6-210ENST00000483290 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
COMMD6-210ENST00000483290 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
COMMD6-210ENST00000483290 CD46P15529 392 aa9.4□□□□□ -0.9
COMMD6-210ENST00000483290 SUZ12Q15022 739 aaKnown RBP9.4□□□□□ -0.9
COMMD6-210ENST00000483290 JUNDP17535 347 aa9.39□□□□□ -0.91
COMMD6-210ENST00000483290 TESPA1A2RU30 521 aaPredicted RBP9.38□□□□□ -0.91
COMMD6-210ENST00000483290 GPR37O15354 613 aa9.38□□□□□ -0.91
COMMD6-210ENST00000483290 SIAH2O43255 324 aa9.38□□□□□ -0.91
COMMD6-210ENST00000483290 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
COMMD6-210ENST00000483290 SCARF1Q14162 830 aa9.37□□□□□ -0.91
COMMD6-210ENST00000483290 NUDT12Q9BQG2 462 aa9.37□□□□□ -0.91
COMMD6-210ENST00000483290 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
COMMD6-210ENST00000483290 HOXA2O43364 376 aa9.33□□□□□ -0.92
COMMD6-210ENST00000483290 KCNMA1Q12791 1236 aa9.32□□□□□ -0.92
COMMD6-210ENST00000483290 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
COMMD6-210ENST00000483290 HLA-CQ95604 372 aa9.32□□□□□ -0.92
COMMD6-210ENST00000483290 VSIG8P0DPA2 414 aa9.31□□□□□ -0.92
COMMD6-210ENST00000483290 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
COMMD6-210ENST00000483290 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
COMMD6-210ENST00000483290 SH3BP2P78314 561 aa9.3□□□□□ -0.92
COMMD6-210ENST00000483290 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
COMMD6-210ENST00000483290 NNTQ13423 1086 aa9.29□□□□□ -0.92
COMMD6-210ENST00000483290 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
COMMD6-210ENST00000483290 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
COMMD6-210ENST00000483290 CCNYL3P0C7X3 344 aa9.28□□□□□ -0.92
COMMD6-210ENST00000483290 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
COMMD6-210ENST00000483290 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
COMMD6-210ENST00000483290 MS4A1P11836 297 aa9.27□□□□□ -0.93
COMMD6-210ENST00000483290 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
COMMD6-210ENST00000483290 SYMPKQ92797 1274 aaKnown RBP9.27□□□□□ -0.93
COMMD6-210ENST00000483290 ADH1CP00326 375 aa9.26□□□□□ -0.93
COMMD6-210ENST00000483290 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
COMMD6-210ENST00000483290 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
COMMD6-210ENST00000483290 TMEM151AQ8N4L1 468 aa9.26□□□□□ -0.93
COMMD6-210ENST00000483290 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
COMMD6-210ENST00000483290 NUTM1Q86Y26 1132 aa9.25□□□□□ -0.93
COMMD6-210ENST00000483290 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
COMMD6-210ENST00000483290 MAN1A2O60476 641 aa9.24□□□□□ -0.93
COMMD6-210ENST00000483290 MAP2K5Q13163 448 aa9.24□□□□□ -0.93
COMMD6-210ENST00000483290 LINC01559Q495D7 138 aa9.24□□□□□ -0.93
COMMD6-210ENST00000483290 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
COMMD6-210ENST00000483290 MPNDQ8N594 471 aa9.24□□□□□ -0.93
COMMD6-210ENST00000483290 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
COMMD6-210ENST00000483290 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
COMMD6-210ENST00000483290 EIF5BO60841 1220 aaKnown RBP9.23□□□□□ -0.93
COMMD6-210ENST00000483290 GDF11O95390 407 aa9.23□□□□□ -0.93
COMMD6-210ENST00000483290 TIMP2P16035 220 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms