RNA–Protein interactions for RNA: ENST00000483099.5

SNRPE-206, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 2

Gene SNRPE, Length 967 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-206ENST00000483099 FOXD1Q16676 465 aa29.5■■■□□ 2.31
SNRPE-206ENST00000483099 ESCO1Q5FWF5 840 aa29.49■■■□□ 2.31
SNRPE-206ENST00000483099 TRPC5Q9UL62 973 aaPredicted RBP29.47■■■□□ 2.31
SNRPE-206ENST00000483099 NPHP3Q7Z494 1330 aa29.46■■■□□ 2.31
SNRPE-206ENST00000483099 ADGRF5Q8IZF2 1346 aa29.45■■■□□ 2.31
SNRPE-206ENST00000483099 CCDC144AA2RUR9 1427 aa29.45■■■□□ 2.3
SNRPE-206ENST00000483099 ATAD2Q6PL18 1390 aa29.44■■■□□ 2.3
SNRPE-206ENST00000483099 FNBP4Q8N3X1 1017 aaPredicted RBP29.44■■■□□ 2.3
SNRPE-206ENST00000483099 MYOM2P54296 1465 aa29.43■■■□□ 2.3
SNRPE-206ENST00000483099 PXDNQ92626 1479 aa29.43■■■□□ 2.3
SNRPE-206ENST00000483099 STK26Q9P289 416 aa29.43■■■□□ 2.3
SNRPE-206ENST00000483099 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
SNRPE-206ENST00000483099 RGL3Q3MIN7 710 aa29.42■■■□□ 2.3
SNRPE-206ENST00000483099 ATRNO75882 1429 aa29.42■■■□□ 2.3
SNRPE-206ENST00000483099 IFT172Q9UG01 1749 aa29.4■■■□□ 2.3
SNRPE-206ENST00000483099 NUTM2FA1L443 756 aa29.4■■■□□ 2.3
SNRPE-206ENST00000483099 FOXO3O43524 673 aa29.4■■■□□ 2.3
SNRPE-206ENST00000483099 WAPLQ7Z5K2 1190 aa29.4■■■□□ 2.3
SNRPE-206ENST00000483099 MARF1Q9Y4F3 1742 aaKnown RBP29.4■■■□□ 2.3
SNRPE-206ENST00000483099 TECPR2O15040 1411 aa29.38■■■□□ 2.29
SNRPE-206ENST00000483099 LRPPRCP42704 1394 aaKnown RBP29.38■■■□□ 2.29
SNRPE-206ENST00000483099 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
SNRPE-206ENST00000483099 ANKRD30BQ9BXX2 1392 aa29.37■■■□□ 2.29
SNRPE-206ENST00000483099 KNDC1Q76NI1 1749 aa29.37■■■□□ 2.29
SNRPE-206ENST00000483099 TMEM132EQ6IEE7 984 aa29.35■■■□□ 2.29
SNRPE-206ENST00000483099 PLEKHH1Q9ULM0 1364 aa29.35■■■□□ 2.29
SNRPE-206ENST00000483099 BCL9LQ86UU0 1499 aa29.33■■■□□ 2.29
SNRPE-206ENST00000483099 FMN2Q9NZ56 1722 aa29.32■■■□□ 2.28
SNRPE-206ENST00000483099 ABCC11Q96J66 1382 aa29.32■■■□□ 2.28
SNRPE-206ENST00000483099 PIK3C2GO75747 1445 aa29.31■■■□□ 2.28
SNRPE-206ENST00000483099 MPHOSPH9Q99550 1183 aa29.31■■■□□ 2.28
SNRPE-206ENST00000483099 KIF1AQ12756 1690 aa29.3■■■□□ 2.28
SNRPE-206ENST00000483099 YTHDC2Q9H6S0 1430 aaKnown RBP29.28■■■□□ 2.28
SNRPE-206ENST00000483099 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.26■■■□□ 2.27
SNRPE-206ENST00000483099 GJD4Q96KN9 370 aaPredicted RBP29.25■■■□□ 2.27
SNRPE-206ENST00000483099 SPATA31A3Q5VYP0 1347 aa29.24■■■□□ 2.27
SNRPE-206ENST00000483099 RGPD8O14715 1765 aaPredicted RBP29.21■■■□□ 2.27
SNRPE-206ENST00000483099 USP32Q8NFA0 1604 aa29.21■■■□□ 2.27
SNRPE-206ENST00000483099 EP400Q96L91 3159 aa29.21■■■□□ 2.27
SNRPE-206ENST00000483099 SLIT2O94813 1529 aa29.2■■■□□ 2.27
SNRPE-206ENST00000483099 KRT28Q7Z3Y7 464 aa29.2■■■□□ 2.26
SNRPE-206ENST00000483099 UNC5CLQ8IV45 518 aa29.2■■■□□ 2.26
SNRPE-206ENST00000483099 GLI3P10071 1580 aa29.19■■■□□ 2.26
SNRPE-206ENST00000483099 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
SNRPE-206ENST00000483099 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
SNRPE-206ENST00000483099 HAP1P54257 671 aaPredicted RBP29.18■■■□□ 2.26
SNRPE-206ENST00000483099 CCDC125Q86Z20 511 aa29.17■■■□□ 2.26
SNRPE-206ENST00000483099 SIRT1Q96EB6 747 aa29.16■■■□□ 2.26
SNRPE-206ENST00000483099 C14orf93Q9H972 538 aaKnown RBP29.16■■■□□ 2.26
SNRPE-206ENST00000483099 PHF8Q9UPP1 1060 aa29.16■■■□□ 2.26
SNRPE-206ENST00000483099 TNS3Q68CZ2 1445 aa29.16■■■□□ 2.26
SNRPE-206ENST00000483099 PLEKHG5O94827 1062 aa29.15■■■□□ 2.26
SNRPE-206ENST00000483099 SRCAPQ6ZRS2 3230 aa29.15■■■□□ 2.26
SNRPE-206ENST00000483099 DHX57Q6P158 1386 aaKnown RBP29.14■■■□□ 2.26
SNRPE-206ENST00000483099 CFAP70Q5T0N1 1121 aa29.14■■■□□ 2.26
SNRPE-206ENST00000483099 NRXN1Q9ULB1 1477 aa29.14■■■□□ 2.26
SNRPE-206ENST00000483099 PSME1Q06323 249 aa29.13■■■□□ 2.25
SNRPE-206ENST00000483099 SAFB2Q14151 953 aaKnown RBP eCLIP29.13■■■□□ 2.25
SNRPE-206ENST00000483099 CABLES1Q8TDN4 633 aa29.12■■■□□ 2.25
SNRPE-206ENST00000483099 BRWD3Q6RI45 1802 aa29.11■■■□□ 2.25
SNRPE-206ENST00000483099 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
SNRPE-206ENST00000483099 PLCH1Q4KWH8 1693 aa29.1■■■□□ 2.25
SNRPE-206ENST00000483099 LMOD2Q6P5Q4 547 aa29.1■■■□□ 2.25
SNRPE-206ENST00000483099 ABCA3Q99758 1704 aa29.1■■■□□ 2.25
SNRPE-206ENST00000483099 SBNO1A3KN83 1393 aa29.07■■■□□ 2.24
SNRPE-206ENST00000483099 BLMP54132 1417 aaPredicted RBP29.07■■■□□ 2.24
SNRPE-206ENST00000483099 NWD2Q9ULI1 1742 aa29.07■■■□□ 2.24
SNRPE-206ENST00000483099 POGKQ9P215 609 aa29.06■■■□□ 2.24
SNRPE-206ENST00000483099 CCDC9Q9Y3X0 531 aaKnown RBP29.06■■■□□ 2.24
SNRPE-206ENST00000483099 ARHGEF10O15013 1369 aa29.05■■■□□ 2.24
SNRPE-206ENST00000483099 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
SNRPE-206ENST00000483099 SEPT12Q8IYM1 358 aa29.05■■■□□ 2.24
SNRPE-206ENST00000483099 VPS72Q15906 364 aa29.04■■■□□ 2.24
SNRPE-206ENST00000483099 DLC1Q96QB1 1528 aa29.04■■■□□ 2.24
SNRPE-206ENST00000483099 PMFBP1Q8TBY8 1022 aa29.03■■■□□ 2.24
SNRPE-206ENST00000483099 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
SNRPE-206ENST00000483099 ADGRB2O60241 1585 aa29.01■■■□□ 2.24
SNRPE-206ENST00000483099 SF3B2Q13435 895 aaKnown RBP28.99■■■□□ 2.23
SNRPE-206ENST00000483099 DEFB132Q7Z7B7 95 aa28.99■■■□□ 2.23
SNRPE-206ENST00000483099 ADGRB1O14514 1584 aa28.97■■■□□ 2.23
SNRPE-206ENST00000483099 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
SNRPE-206ENST00000483099 TRAK1Q9UPV9 953 aa28.96■■■□□ 2.23
SNRPE-206ENST00000483099 TRPM3Q9HCF6 1732 aaPredicted RBP28.96■■■□□ 2.23
SNRPE-206ENST00000483099 A0A0G2JS52 829 aa28.95■■■□□ 2.22
SNRPE-206ENST00000483099 FAM83GA6ND36 823 aa28.95■■■□□ 2.22
SNRPE-206ENST00000483099 MYT1Q01538 1121 aa28.95■■■□□ 2.22
SNRPE-206ENST00000483099 RAB3GAP2Q9H2M9 1393 aa28.94■■■□□ 2.22
SNRPE-206ENST00000483099 KRT27Q7Z3Y8 459 aa28.94■■■□□ 2.22
SNRPE-206ENST00000483099 NRAPQ86VF7 1730 aa28.94■■■□□ 2.22
SNRPE-206ENST00000483099 MINK1Q8N4C8 1332 aaPredicted RBP28.94■■■□□ 2.22
SNRPE-206ENST00000483099 ONECUT3O60422 494 aaPredicted RBP28.93■■■□□ 2.22
SNRPE-206ENST00000483099 GPRASP1Q5JY77 1395 aa28.92■■■□□ 2.22
SNRPE-206ENST00000483099 ALS2Q96Q42 1657 aa28.92■■■□□ 2.22
SNRPE-206ENST00000483099 EIF3AQ14152 1382 aaKnown RBP28.91■■■□□ 2.22
SNRPE-206ENST00000483099 TULP4Q9NRJ4 1543 aa28.9■■■□□ 2.22
SNRPE-206ENST00000483099 KDM2AQ9Y2K7 1162 aa28.9■■■□□ 2.22
SNRPE-206ENST00000483099 COL14A1Q05707 1796 aaKnown RBP28.89■■■□□ 2.22
SNRPE-206ENST00000483099 BTG4Q9NY30 223 aa28.89■■■□□ 2.22
SNRPE-206ENST00000483099 PRR36Q9H6K5 1346 aa28.89■■■□□ 2.21
SNRPE-206ENST00000483099 FAM98CQ17RN3 349 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms