RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
HDLBP-239ENST00000483086 SOCS7O14512 581 aa17.84■□□□□ 0.45
HDLBP-239ENST00000483086 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
HDLBP-239ENST00000483086 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
HDLBP-239ENST00000483086 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
HDLBP-239ENST00000483086 ORAI2Q96SN7 254 aa17.82■□□□□ 0.44
HDLBP-239ENST00000483086 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
HDLBP-239ENST00000483086 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
HDLBP-239ENST00000483086 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
HDLBP-239ENST00000483086 KDM2AQ9Y2K7 1162 aa17.76■□□□□ 0.43
HDLBP-239ENST00000483086 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
HDLBP-239ENST00000483086 DLC1Q96QB1 1528 aa17.75■□□□□ 0.43
HDLBP-239ENST00000483086 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
HDLBP-239ENST00000483086 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
HDLBP-239ENST00000483086 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
HDLBP-239ENST00000483086 PXDNQ92626 1479 aa17.74■□□□□ 0.43
HDLBP-239ENST00000483086 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
HDLBP-239ENST00000483086 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
HDLBP-239ENST00000483086 ADGRB2O60241 1585 aa17.71■□□□□ 0.43
HDLBP-239ENST00000483086 SAFB2Q14151 953 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDLBP-239ENST00000483086 SIRT1Q96EB6 747 aa17.71■□□□□ 0.43
HDLBP-239ENST00000483086 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
HDLBP-239ENST00000483086 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
HDLBP-239ENST00000483086 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
HDLBP-239ENST00000483086 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-239ENST00000483086 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-239ENST00000483086 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
HDLBP-239ENST00000483086 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-239ENST00000483086 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
HDLBP-239ENST00000483086 KIF1AQ12756 1690 aa17.68■□□□□ 0.42
HDLBP-239ENST00000483086 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-239ENST00000483086 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
HDLBP-239ENST00000483086 FOXO3O43524 673 aa17.66■□□□□ 0.42
HDLBP-239ENST00000483086 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
HDLBP-239ENST00000483086 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
HDLBP-239ENST00000483086 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
HDLBP-239ENST00000483086 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-239ENST00000483086 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
HDLBP-239ENST00000483086 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
HDLBP-239ENST00000483086 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
HDLBP-239ENST00000483086 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
HDLBP-239ENST00000483086 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-239ENST00000483086 AFF2P51816 1311 aa17.61■□□□□ 0.41
HDLBP-239ENST00000483086 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-239ENST00000483086 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
HDLBP-239ENST00000483086 POGKQ9P215 609 aa17.6■□□□□ 0.41
HDLBP-239ENST00000483086 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
HDLBP-239ENST00000483086 TULP4Q9NRJ4 1543 aa17.59■□□□□ 0.41
HDLBP-239ENST00000483086 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
HDLBP-239ENST00000483086 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
HDLBP-239ENST00000483086 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
HDLBP-239ENST00000483086 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
HDLBP-239ENST00000483086 PHF8Q9UPP1 1060 aa17.58■□□□□ 0.4
HDLBP-239ENST00000483086 TOPAZ1Q8N9V7 1692 aa17.58■□□□□ 0.4
HDLBP-239ENST00000483086 ALS2Q96Q42 1657 aa17.57■□□□□ 0.4
HDLBP-239ENST00000483086 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
HDLBP-239ENST00000483086 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
HDLBP-239ENST00000483086 ATP7BP35670 1465 aa17.56■□□□□ 0.4
HDLBP-239ENST00000483086 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-239ENST00000483086 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
HDLBP-239ENST00000483086 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
HDLBP-239ENST00000483086 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
HDLBP-239ENST00000483086 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
HDLBP-239ENST00000483086 WASLO00401 505 aaPredicted RBP17.54■□□□□ 0.4
HDLBP-239ENST00000483086 TNS3Q68CZ2 1445 aa17.54■□□□□ 0.4
HDLBP-239ENST00000483086 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
HDLBP-239ENST00000483086 EP400Q96L91 3159 aa17.52■□□□□ 0.4
HDLBP-239ENST00000483086 RGS12O14924 1447 aa17.51■□□□□ 0.39
HDLBP-239ENST00000483086 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
HDLBP-239ENST00000483086 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
HDLBP-239ENST00000483086 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
HDLBP-239ENST00000483086 PLCH1Q4KWH8 1693 aa17.5■□□□□ 0.39
HDLBP-239ENST00000483086 SBNO1A3KN83 1393 aa17.5■□□□□ 0.39
HDLBP-239ENST00000483086 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
HDLBP-239ENST00000483086 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
HDLBP-239ENST00000483086 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-239ENST00000483086 ATRNO75882 1429 aa17.48■□□□□ 0.39
HDLBP-239ENST00000483086 RXRBP28702 533 aa17.48■□□□□ 0.39
HDLBP-239ENST00000483086 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
HDLBP-239ENST00000483086 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
HDLBP-239ENST00000483086 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
HDLBP-239ENST00000483086 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
HDLBP-239ENST00000483086 SLIT2O94813 1529 aa17.47■□□□□ 0.39
HDLBP-239ENST00000483086 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
HDLBP-239ENST00000483086 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
HDLBP-239ENST00000483086 USP21Q9UK80 565 aa17.46■□□□□ 0.39
HDLBP-239ENST00000483086 PSME1Q06323 249 aa17.45■□□□□ 0.38
HDLBP-239ENST00000483086 GLI3P10071 1580 aa17.45■□□□□ 0.38
HDLBP-239ENST00000483086 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
HDLBP-239ENST00000483086 EIF3AQ14152 1382 aaKnown RBP17.44■□□□□ 0.38
HDLBP-239ENST00000483086 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
HDLBP-239ENST00000483086 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
HDLBP-239ENST00000483086 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
HDLBP-239ENST00000483086 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
HDLBP-239ENST00000483086 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
HDLBP-239ENST00000483086 POLR3AO14802 1390 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-239ENST00000483086 LMOD2Q6P5Q4 547 aa17.41■□□□□ 0.38
HDLBP-239ENST00000483086 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
HDLBP-239ENST00000483086 GPRASP1Q5JY77 1395 aa17.4■□□□□ 0.38
HDLBP-239ENST00000483086 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms