RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 ZNF772Q68DY9 489 aaPredicted RBP19.29■□□□□ 0.68
ZKSCAN1-204ENST00000482979 LRRC59Q96AG4 307 aaKnown RBP19.29■□□□□ 0.68
ZKSCAN1-204ENST00000482979 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
ZKSCAN1-204ENST00000482979 ORAI2Q96SN7 254 aa19.28■□□□□ 0.68
ZKSCAN1-204ENST00000482979 RGL3Q3MIN7 710 aa19.27■□□□□ 0.68
ZKSCAN1-204ENST00000482979 AFF2P51816 1311 aa19.24■□□□□ 0.67
ZKSCAN1-204ENST00000482979 SOS2Q07890 1332 aaPredicted RBP19.23■□□□□ 0.67
ZKSCAN1-204ENST00000482979 CDC42BPGQ6DT37 1551 aa19.23■□□□□ 0.67
ZKSCAN1-204ENST00000482979 TECPR2O15040 1411 aa19.22■□□□□ 0.67
ZKSCAN1-204ENST00000482979 PIK3C2GO75747 1445 aa19.22■□□□□ 0.67
ZKSCAN1-204ENST00000482979 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
ZKSCAN1-204ENST00000482979 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
ZKSCAN1-204ENST00000482979 LRPPRCP42704 1394 aaKnown RBP19.21■□□□□ 0.67
ZKSCAN1-204ENST00000482979 RXRBP28702 533 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 STK26Q9P289 416 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
ZKSCAN1-204ENST00000482979 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
ZKSCAN1-204ENST00000482979 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
ZKSCAN1-204ENST00000482979 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
ZKSCAN1-204ENST00000482979 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
ZKSCAN1-204ENST00000482979 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
ZKSCAN1-204ENST00000482979 PXDNQ92626 1479 aa19.16■□□□□ 0.66
ZKSCAN1-204ENST00000482979 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
ZKSCAN1-204ENST00000482979 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
ZKSCAN1-204ENST00000482979 UPF1Q92900 1129 aaKnown RBP eCLIP19.16■□□□□ 0.66
ZKSCAN1-204ENST00000482979 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
ZKSCAN1-204ENST00000482979 YTHDC2Q9H6S0 1430 aaKnown RBP19.15■□□□□ 0.66
ZKSCAN1-204ENST00000482979 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
ZKSCAN1-204ENST00000482979 RGS12O14924 1447 aa19.14■□□□□ 0.65
ZKSCAN1-204ENST00000482979 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
ZKSCAN1-204ENST00000482979 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
ZKSCAN1-204ENST00000482979 FMN2Q9NZ56 1722 aa19.13■□□□□ 0.65
ZKSCAN1-204ENST00000482979 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
ZKSCAN1-204ENST00000482979 XPCQ01831 940 aaPredicted RBP19.12■□□□□ 0.65
ZKSCAN1-204ENST00000482979 NGLY1Q96IV0 654 aa19.12■□□□□ 0.65
ZKSCAN1-204ENST00000482979 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
ZKSCAN1-204ENST00000482979 MYOM2P54296 1465 aa19.12■□□□□ 0.65
ZKSCAN1-204ENST00000482979 FOXO3O43524 673 aa19.11■□□□□ 0.65
ZKSCAN1-204ENST00000482979 CFAP70Q5T0N1 1121 aa19.11■□□□□ 0.65
ZKSCAN1-204ENST00000482979 RBM6P78332 1123 aaKnown RBP19.1■□□□□ 0.65
ZKSCAN1-204ENST00000482979 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
ZKSCAN1-204ENST00000482979 USP21Q9UK80 565 aa19.08■□□□□ 0.64
ZKSCAN1-204ENST00000482979 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
ZKSCAN1-204ENST00000482979 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
ZKSCAN1-204ENST00000482979 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
ZKSCAN1-204ENST00000482979 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
ZKSCAN1-204ENST00000482979 NBPF8Q3BBV2 869 aa19.05■□□□□ 0.64
ZKSCAN1-204ENST00000482979 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
ZKSCAN1-204ENST00000482979 ATRNO75882 1429 aa19.05■□□□□ 0.64
ZKSCAN1-204ENST00000482979 ADGRB1O14514 1584 aa19.03■□□□□ 0.64
ZKSCAN1-204ENST00000482979 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
ZKSCAN1-204ENST00000482979 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
ZKSCAN1-204ENST00000482979 DLC1Q96QB1 1528 aa19.02■□□□□ 0.64
ZKSCAN1-204ENST00000482979 SAFB2Q14151 953 aaKnown RBP eCLIP19.02■□□□□ 0.64
ZKSCAN1-204ENST00000482979 STAC3Q96MF2 364 aa19.02■□□□□ 0.64
ZKSCAN1-204ENST00000482979 PRAM1Q96QH2 718 aa19.02■□□□□ 0.64
ZKSCAN1-204ENST00000482979 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
ZKSCAN1-204ENST00000482979 KIAA1210Q9ULL0 1709 aa19.01■□□□□ 0.63
ZKSCAN1-204ENST00000482979 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
ZKSCAN1-204ENST00000482979 USP32Q8NFA0 1604 aa19■□□□□ 0.63
ZKSCAN1-204ENST00000482979 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
ZKSCAN1-204ENST00000482979 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
ZKSCAN1-204ENST00000482979 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
ZKSCAN1-204ENST00000482979 TNS3Q68CZ2 1445 aa18.97■□□□□ 0.63
ZKSCAN1-204ENST00000482979 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
ZKSCAN1-204ENST00000482979 SLIT2O94813 1529 aa18.96■□□□□ 0.63
ZKSCAN1-204ENST00000482979 POGKQ9P215 609 aa18.95■□□□□ 0.62
ZKSCAN1-204ENST00000482979 TRAK1Q9UPV9 953 aa18.95■□□□□ 0.62
ZKSCAN1-204ENST00000482979 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
ZKSCAN1-204ENST00000482979 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
ZKSCAN1-204ENST00000482979 ABCA3Q99758 1704 aa18.93■□□□□ 0.62
ZKSCAN1-204ENST00000482979 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
ZKSCAN1-204ENST00000482979 CABLES1Q8TDN4 633 aa18.93■□□□□ 0.62
ZKSCAN1-204ENST00000482979 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
ZKSCAN1-204ENST00000482979 GLI3P10071 1580 aa18.93■□□□□ 0.62
ZKSCAN1-204ENST00000482979 SBNO1A3KN83 1393 aa18.92■□□□□ 0.62
ZKSCAN1-204ENST00000482979 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
ZKSCAN1-204ENST00000482979 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
ZKSCAN1-204ENST00000482979 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
ZKSCAN1-204ENST00000482979 PSME1Q06323 249 aa18.91■□□□□ 0.62
ZKSCAN1-204ENST00000482979 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
ZKSCAN1-204ENST00000482979 MINK1Q8N4C8 1332 aaPredicted RBP18.91■□□□□ 0.62
ZKSCAN1-204ENST00000482979 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
ZKSCAN1-204ENST00000482979 UNC5CLQ8IV45 518 aa18.91■□□□□ 0.62
ZKSCAN1-204ENST00000482979 TRPM3Q9HCF6 1732 aaPredicted RBP18.9■□□□□ 0.62
ZKSCAN1-204ENST00000482979 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
ZKSCAN1-204ENST00000482979 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.61
ZKSCAN1-204ENST00000482979 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
ZKSCAN1-204ENST00000482979 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
ZKSCAN1-204ENST00000482979 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
ZKSCAN1-204ENST00000482979 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
ZKSCAN1-204ENST00000482979 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
ZKSCAN1-204ENST00000482979 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
ZKSCAN1-204ENST00000482979 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
ZKSCAN1-204ENST00000482979 EP400Q96L91 3159 aa18.86■□□□□ 0.61
ZKSCAN1-204ENST00000482979 ALS2Q96Q42 1657 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms