RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 RGL3Q3MIN7 710 aa14.07□□□□□ -0.16
RPGR-208ENST00000482855 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
RPGR-208ENST00000482855 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
RPGR-208ENST00000482855 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
RPGR-208ENST00000482855 E9PSI1 815 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 TRAK2O60296 914 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
RPGR-208ENST00000482855 TRAPPC8Q9Y2L5 1435 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 CCDC146Q8IYE0 955 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 ESPNB1AK53 854 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
RPGR-208ENST00000482855 A2MP01023 1474 aa14.04□□□□□ -0.16
RPGR-208ENST00000482855 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
RPGR-208ENST00000482855 COG6Q9Y2V7 657 aa14.04□□□□□ -0.16
RPGR-208ENST00000482855 ZMYM3Q14202 1370 aa14.04□□□□□ -0.16
RPGR-208ENST00000482855 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
RPGR-208ENST00000482855 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
RPGR-208ENST00000482855 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
RPGR-208ENST00000482855 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
RPGR-208ENST00000482855 APAF1O14727 1248 aa14.03□□□□□ -0.16
RPGR-208ENST00000482855 PMFBP1Q8TBY8 1022 aa14.03□□□□□ -0.16
RPGR-208ENST00000482855 PIK3C2GO75747 1445 aa14.02□□□□□ -0.16
RPGR-208ENST00000482855 RIMS1Q86UR5 1692 aaKnown RBP14.02□□□□□ -0.16
RPGR-208ENST00000482855 PANK1Q8TE04 598 aa14.02□□□□□ -0.16
RPGR-208ENST00000482855 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.16
RPGR-208ENST00000482855 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.17
RPGR-208ENST00000482855 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
RPGR-208ENST00000482855 DEPDC5O75140 1603 aa14.02□□□□□ -0.17
RPGR-208ENST00000482855 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
RPGR-208ENST00000482855 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
RPGR-208ENST00000482855 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
RPGR-208ENST00000482855 PTPRMP28827 1452 aa14□□□□□ -0.17
RPGR-208ENST00000482855 DDX11L8A8MPP1 907 aa14□□□□□ -0.17
RPGR-208ENST00000482855 TPM2P07951 284 aa14□□□□□ -0.17
RPGR-208ENST00000482855 ERBB4Q15303 1308 aa13.99□□□□□ -0.17
RPGR-208ENST00000482855 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
RPGR-208ENST00000482855 AAMPQ13685 434 aa13.99□□□□□ -0.17
RPGR-208ENST00000482855 RAPGEF3O95398 923 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 C3P01024 1663 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 NPATQ14207 1427 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 SYNMO15061 1565 aa13.98□□□□□ -0.17
RPGR-208ENST00000482855 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
RPGR-208ENST00000482855 SETD1BQ9UPS6 1966 aaKnown RBP13.97□□□□□ -0.17
RPGR-208ENST00000482855 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.17
RPGR-208ENST00000482855 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
RPGR-208ENST00000482855 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.18
RPGR-208ENST00000482855 PLA2R1Q13018 1463 aa13.96□□□□□ -0.18
RPGR-208ENST00000482855 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
RPGR-208ENST00000482855 PCDHB15Q9Y5E8 787 aa13.95□□□□□ -0.18
RPGR-208ENST00000482855 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
RPGR-208ENST00000482855 RWDD1Q9H446 243 aaPredicted RBP13.95□□□□□ -0.18
RPGR-208ENST00000482855 KDM5AP29375 1690 aaKnown RBP13.94□□□□□ -0.18
RPGR-208ENST00000482855 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPGR-208ENST00000482855 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
RPGR-208ENST00000482855 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
RPGR-208ENST00000482855 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
RPGR-208ENST00000482855 MROH1Q8NDA8 1641 aa13.92□□□□□ -0.18
RPGR-208ENST00000482855 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
RPGR-208ENST00000482855 SPAG9O60271 1321 aaKnown RBP13.92□□□□□ -0.18
RPGR-208ENST00000482855 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
RPGR-208ENST00000482855 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
RPGR-208ENST00000482855 UNC13BO14795 1591 aa13.91□□□□□ -0.18
RPGR-208ENST00000482855 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
RPGR-208ENST00000482855 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
RPGR-208ENST00000482855 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
RPGR-208ENST00000482855 MYOM1P52179 1685 aa13.9□□□□□ -0.18
RPGR-208ENST00000482855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
RPGR-208ENST00000482855 RLBP1P12271 317 aa13.89□□□□□ -0.19
RPGR-208ENST00000482855 GBP4Q96PP9 640 aa13.89□□□□□ -0.19
RPGR-208ENST00000482855 CLTCQ00610 1675 aaKnown RBP13.89□□□□□ -0.19
RPGR-208ENST00000482855 SKOR2Q2VWA4 1001 aaPredicted RBP13.89□□□□□ -0.19
RPGR-208ENST00000482855 GAS2L3Q86XJ1 694 aa13.89□□□□□ -0.19
RPGR-208ENST00000482855 NCOA3Q9Y6Q9 1424 aa13.88□□□□□ -0.19
RPGR-208ENST00000482855 PTMSP20962 102 aa13.88□□□□□ -0.19
RPGR-208ENST00000482855 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
RPGR-208ENST00000482855 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
RPGR-208ENST00000482855 TNNQ9UQP3 1299 aa13.87□□□□□ -0.19
RPGR-208ENST00000482855 AFAP1Q8N556 730 aa13.87□□□□□ -0.19
RPGR-208ENST00000482855 DDIT3P35638 169 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
RPGR-208ENST00000482855 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 CALD1Q05682 793 aaKnown RBP13.86□□□□□ -0.19
RPGR-208ENST00000482855 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
RPGR-208ENST00000482855 ARHGAP31Q2M1Z3 1444 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
RPGR-208ENST00000482855 BCL2L13Q9BXK5 485 aa13.86□□□□□ -0.19
RPGR-208ENST00000482855 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
RPGR-208ENST00000482855 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
RPGR-208ENST00000482855 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
RPGR-208ENST00000482855 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
RPGR-208ENST00000482855 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
RPGR-208ENST00000482855 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.84□□□□□ -0.19
RPGR-208ENST00000482855 SPATA31D1Q6ZQQ2 1576 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms