RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
RAPGEF3-210ENST00000482843 TRPM2O94759 1503 aa15.58■□□□□ 0.08
RAPGEF3-210ENST00000482843 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.08
RAPGEF3-210ENST00000482843 NPATQ14207 1427 aa15.57■□□□□ 0.08
RAPGEF3-210ENST00000482843 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
RAPGEF3-210ENST00000482843 CGNL1Q0VF96 1302 aa15.57■□□□□ 0.08
RAPGEF3-210ENST00000482843 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF3-210ENST00000482843 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
RAPGEF3-210ENST00000482843 PDE4AP27815 886 aa15.55■□□□□ 0.08
RAPGEF3-210ENST00000482843 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
RAPGEF3-210ENST00000482843 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
RAPGEF3-210ENST00000482843 ASXL1Q8IXJ9 1541 aa15.54■□□□□ 0.08
RAPGEF3-210ENST00000482843 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
RAPGEF3-210ENST00000482843 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
RAPGEF3-210ENST00000482843 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-210ENST00000482843 IL27Q8NEV9 243 aa15.53■□□□□ 0.08
RAPGEF3-210ENST00000482843 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-210ENST00000482843 POGZQ7Z3K3 1410 aa15.52■□□□□ 0.08
RAPGEF3-210ENST00000482843 E9PSI1 815 aa15.52■□□□□ 0.08
RAPGEF3-210ENST00000482843 FBLN1P23142 703 aa15.52■□□□□ 0.07
RAPGEF3-210ENST00000482843 PANK1Q8TE04 598 aa15.52■□□□□ 0.07
RAPGEF3-210ENST00000482843 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.07
RAPGEF3-210ENST00000482843 SOX12O15370 315 aa15.51■□□□□ 0.07
RAPGEF3-210ENST00000482843 RTL5Q5HYW3 569 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-210ENST00000482843 WAPLQ7Z5K2 1190 aa15.51■□□□□ 0.07
RAPGEF3-210ENST00000482843 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
RAPGEF3-210ENST00000482843 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
RAPGEF3-210ENST00000482843 YEATS2Q9ULM3 1422 aa15.5■□□□□ 0.07
RAPGEF3-210ENST00000482843 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
RAPGEF3-210ENST00000482843 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
RAPGEF3-210ENST00000482843 IPO9Q96P70 1041 aaKnown RBP15.5■□□□□ 0.07
RAPGEF3-210ENST00000482843 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 RUNDC1Q96C34 613 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 CABP1Q9NZU7 370 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 ABCA9Q8IUA7 1624 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
RAPGEF3-210ENST00000482843 TET3O43151 1660 aa15.48■□□□□ 0.07
RAPGEF3-210ENST00000482843 NEFMP07197 916 aa15.48■□□□□ 0.07
RAPGEF3-210ENST00000482843 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
RAPGEF3-210ENST00000482843 BLMP54132 1417 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF3-210ENST00000482843 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF3-210ENST00000482843 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
RAPGEF3-210ENST00000482843 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
RAPGEF3-210ENST00000482843 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
RAPGEF3-210ENST00000482843 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
RAPGEF3-210ENST00000482843 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.06
RAPGEF3-210ENST00000482843 EFCAB6Q5THR3 1501 aa15.45■□□□□ 0.06
RAPGEF3-210ENST00000482843 FTSJ3Q8IY81 847 aaKnown RBP15.44■□□□□ 0.06
RAPGEF3-210ENST00000482843 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
RAPGEF3-210ENST00000482843 TXNDC2Q86VQ3 553 aa15.44■□□□□ 0.06
RAPGEF3-210ENST00000482843 KIDINS220Q9ULH0 1771 aa15.43■□□□□ 0.06
RAPGEF3-210ENST00000482843 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
RAPGEF3-210ENST00000482843 CENPQQ7L2Z9 268 aaPredicted RBP15.42■□□□□ 0.06
RAPGEF3-210ENST00000482843 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
RAPGEF3-210ENST00000482843 HMOX1P09601 288 aa15.42■□□□□ 0.06
RAPGEF3-210ENST00000482843 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
RAPGEF3-210ENST00000482843 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
RAPGEF3-210ENST00000482843 PPRC1Q5VV67 1664 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-210ENST00000482843 BACH2Q9BYV9 841 aa15.41■□□□□ 0.06
RAPGEF3-210ENST00000482843 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
RAPGEF3-210ENST00000482843 CEP152O94986 1710 aa15.41■□□□□ 0.06
RAPGEF3-210ENST00000482843 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
RAPGEF3-210ENST00000482843 ZMYM4Q5VZL5 1548 aa15.4■□□□□ 0.06
RAPGEF3-210ENST00000482843 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
RAPGEF3-210ENST00000482843 MAP3K4Q9Y6R4 1608 aa15.4■□□□□ 0.06
RAPGEF3-210ENST00000482843 ABCA6Q8N139 1617 aa15.4■□□□□ 0.06
RAPGEF3-210ENST00000482843 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
RAPGEF3-210ENST00000482843 RIPK4P57078 832 aa15.39■□□□□ 0.05
RAPGEF3-210ENST00000482843 MYOM2P54296 1465 aa15.39■□□□□ 0.05
RAPGEF3-210ENST00000482843 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
RAPGEF3-210ENST00000482843 KIF1BO60333 1816 aa15.39■□□□□ 0.05
RAPGEF3-210ENST00000482843 FYB1O15117 783 aa15.38■□□□□ 0.05
RAPGEF3-210ENST00000482843 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
RAPGEF3-210ENST00000482843 LAMC1P11047 1609 aa15.38■□□□□ 0.05
RAPGEF3-210ENST00000482843 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
RAPGEF3-210ENST00000482843 SYNMO15061 1565 aa15.38■□□□□ 0.05
RAPGEF3-210ENST00000482843 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
RAPGEF3-210ENST00000482843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
RAPGEF3-210ENST00000482843 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
RAPGEF3-210ENST00000482843 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
RAPGEF3-210ENST00000482843 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
RAPGEF3-210ENST00000482843 MS4A1P11836 297 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 ABCC3O15438 1527 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 A0A1W2PP64 1363 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 IGHDP01880 384 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 ITPRIPQ8IWB1 547 aa15.36■□□□□ 0.05
RAPGEF3-210ENST00000482843 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 VWDEQ8N2E2 1590 aa15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 RARSP54136 660 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
RAPGEF3-210ENST00000482843 CEBPAP49715 358 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-210ENST00000482843 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
RAPGEF3-210ENST00000482843 NEO1Q92859 1461 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms