RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ADGRB1O14514 1584 aa26.41■■□□□ 1.82
SMIM4-204ENST00000482728 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
SMIM4-204ENST00000482728 C1orf167Q5SNV9 1468 aa26.36■■□□□ 1.81
SMIM4-204ENST00000482728 TONSLQ96HA7 1378 aa26.36■■□□□ 1.81
SMIM4-204ENST00000482728 DLC1Q96QB1 1528 aa26.36■■□□□ 1.81
SMIM4-204ENST00000482728 NUTM2FA1L443 756 aa26.35■■□□□ 1.81
SMIM4-204ENST00000482728 ORAI2Q96SN7 254 aa26.35■■□□□ 1.81
SMIM4-204ENST00000482728 ESCO1Q5FWF5 840 aa26.34■■□□□ 1.81
SMIM4-204ENST00000482728 PHLPP1O60346 1717 aa26.33■■□□□ 1.81
SMIM4-204ENST00000482728 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
SMIM4-204ENST00000482728 CDC42BPGQ6DT37 1551 aa26.33■■□□□ 1.8
SMIM4-204ENST00000482728 DISP3Q9P2K9 1392 aa26.32■■□□□ 1.8
SMIM4-204ENST00000482728 MINK1Q8N4C8 1332 aaPredicted RBP26.3■■□□□ 1.8
SMIM4-204ENST00000482728 HIRIP3Q9BW71 556 aaPredicted RBP26.29■■□□□ 1.8
SMIM4-204ENST00000482728 DDX17Q92841 729 aaKnown RBP26.28■■□□□ 1.8
SMIM4-204ENST00000482728 AHDC1Q5TGY3 1603 aaPredicted RBP26.28■■□□□ 1.8
SMIM4-204ENST00000482728 JCADQ9P266 1359 aa26.27■■□□□ 1.8
SMIM4-204ENST00000482728 LRRC59Q96AG4 307 aaKnown RBP26.26■■□□□ 1.79
SMIM4-204ENST00000482728 NBPF8Q3BBV2 869 aa26.24■■□□□ 1.79
SMIM4-204ENST00000482728 ROCK2O75116 1388 aaKnown RBP26.23■■□□□ 1.79
SMIM4-204ENST00000482728 CLSPNQ9HAW4 1339 aa26.23■■□□□ 1.79
SMIM4-204ENST00000482728 COL16A1Q07092 1604 aaPredicted RBP26.23■■□□□ 1.79
SMIM4-204ENST00000482728 WASLO00401 505 aaPredicted RBP26.22■■□□□ 1.79
SMIM4-204ENST00000482728 FOXO3O43524 673 aa26.22■■□□□ 1.79
SMIM4-204ENST00000482728 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
SMIM4-204ENST00000482728 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
SMIM4-204ENST00000482728 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
SMIM4-204ENST00000482728 FMN2Q9NZ56 1722 aa26.21■■□□□ 1.79
SMIM4-204ENST00000482728 ARHGEF28Q8N1W1 1705 aaKnown RBP26.19■■□□□ 1.78
SMIM4-204ENST00000482728 NHSL1Q5SYE7 1610 aa26.19■■□□□ 1.78
SMIM4-204ENST00000482728 PHF8Q9UPP1 1060 aa26.19■■□□□ 1.78
SMIM4-204ENST00000482728 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
SMIM4-204ENST00000482728 SOS2Q07890 1332 aaPredicted RBP26.18■■□□□ 1.78
SMIM4-204ENST00000482728 CENPJQ9HC77 1338 aaPredicted RBP26.18■■□□□ 1.78
SMIM4-204ENST00000482728 MED1Q15648 1581 aaPredicted RBP26.18■■□□□ 1.78
SMIM4-204ENST00000482728 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
SMIM4-204ENST00000482728 SPATA31A6Q5VVP1 1343 aa26.16■■□□□ 1.78
SMIM4-204ENST00000482728 ADGRB2O60241 1585 aa26.16■■□□□ 1.78
SMIM4-204ENST00000482728 XPCQ01831 940 aaPredicted RBP26.15■■□□□ 1.78
SMIM4-204ENST00000482728 CDK19Q9BWU1 502 aa26.15■■□□□ 1.78
SMIM4-204ENST00000482728 CARD11Q9BXL7 1154 aa26.15■■□□□ 1.78
SMIM4-204ENST00000482728 ANKARQ7Z5J8 1434 aa26.14■■□□□ 1.78
SMIM4-204ENST00000482728 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
SMIM4-204ENST00000482728 NUTM2BA6NNL0 878 aaPredicted RBP26.12■■□□□ 1.77
SMIM4-204ENST00000482728 NUTM2EB1AL46 878 aaPredicted RBP26.12■■□□□ 1.77
SMIM4-204ENST00000482728 PSME1Q06323 249 aa26.12■■□□□ 1.77
SMIM4-204ENST00000482728 NUTM2AQ8IVF1 878 aaPredicted RBP26.12■■□□□ 1.77
SMIM4-204ENST00000482728 PMFBP1Q8TBY8 1022 aa26.12■■□□□ 1.77
SMIM4-204ENST00000482728 RGPD8O14715 1765 aaPredicted RBP26.11■■□□□ 1.77
SMIM4-204ENST00000482728 KRT28Q7Z3Y7 464 aa26.11■■□□□ 1.77
SMIM4-204ENST00000482728 NUDT16Q96DE0 195 aaKnown RBP26.11■■□□□ 1.77
SMIM4-204ENST00000482728 MEX3CQ5U5Q3 659 aaKnown RBP26.1■■□□□ 1.77
SMIM4-204ENST00000482728 PRR36Q9H6K5 1346 aa26.1■■□□□ 1.77
SMIM4-204ENST00000482728 GPRASP1Q5JY77 1395 aa26.09■■□□□ 1.77
SMIM4-204ENST00000482728 SRPK2P78362 688 aaKnown RBP26.08■■□□□ 1.77
SMIM4-204ENST00000482728 KIF1AQ12756 1690 aa26.08■■□□□ 1.77
SMIM4-204ENST00000482728 SHPRHQ149N8 1683 aa26.08■■□□□ 1.77
SMIM4-204ENST00000482728 TULP4Q9NRJ4 1543 aa26.08■■□□□ 1.77
SMIM4-204ENST00000482728 PNPLA6Q8IY17 1366 aa26.07■■□□□ 1.76
SMIM4-204ENST00000482728 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
SMIM4-204ENST00000482728 RALGAPBQ86X10 1494 aa26.06■■□□□ 1.76
SMIM4-204ENST00000482728 PXDNQ92626 1479 aa26.05■■□□□ 1.76
SMIM4-204ENST00000482728 CCDC61Q9Y6R9 512 aa26.05■■□□□ 1.76
SMIM4-204ENST00000482728 USP32Q8NFA0 1604 aa26.04■■□□□ 1.76
SMIM4-204ENST00000482728 EVC2Q86UK5 1308 aa26.03■■□□□ 1.76
SMIM4-204ENST00000482728 CABP2Q9NPB3 220 aa26.02■■□□□ 1.76
SMIM4-204ENST00000482728 SPATA31A3Q5VYP0 1347 aa26.01■■□□□ 1.75
SMIM4-204ENST00000482728 LMOD2Q6P5Q4 547 aa26.01■■□□□ 1.75
SMIM4-204ENST00000482728 QRICH2Q9H0J4 1663 aa26.01■■□□□ 1.75
SMIM4-204ENST00000482728 LRP6O75581 1613 aa25.99■■□□□ 1.75
SMIM4-204ENST00000482728 ATP7BP35670 1465 aa25.98■■□□□ 1.75
SMIM4-204ENST00000482728 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
SMIM4-204ENST00000482728 ILDR2Q71H61 639 aa25.98■■□□□ 1.75
SMIM4-204ENST00000482728 RGS17Q9UGC6 210 aaPredicted RBP25.97■■□□□ 1.75
SMIM4-204ENST00000482728 SBNO1A3KN83 1393 aa25.96■■□□□ 1.75
SMIM4-204ENST00000482728 PLEKHG3A1L390 1219 aa25.96■■□□□ 1.75
SMIM4-204ENST00000482728 PAK3O75914 559 aaPredicted RBP25.95■■□□□ 1.74
SMIM4-204ENST00000482728 ITSN1Q15811 1721 aa25.94■■□□□ 1.74
SMIM4-204ENST00000482728 ACEP12821 1306 aa25.94■■□□□ 1.74
SMIM4-204ENST00000482728 C8orf37Q96NL8 207 aa25.94■■□□□ 1.74
SMIM4-204ENST00000482728 NGLY1Q96IV0 654 aa25.93■■□□□ 1.74
SMIM4-204ENST00000482728 TNS3Q68CZ2 1445 aa25.93■■□□□ 1.74
SMIM4-204ENST00000482728 PLEKHG5O94827 1062 aa25.92■■□□□ 1.74
SMIM4-204ENST00000482728 HAP1P54257 671 aaPredicted RBP25.92■■□□□ 1.74
SMIM4-204ENST00000482728 ZNF772Q68DY9 489 aaPredicted RBP25.92■■□□□ 1.74
SMIM4-204ENST00000482728 CABP1Q9NZU7 370 aa25.92■■□□□ 1.74
SMIM4-204ENST00000482728 ARHGEF10O15013 1369 aa25.92■■□□□ 1.74
SMIM4-204ENST00000482728 PPIP5K1Q6PFW1 1433 aa25.91■■□□□ 1.74
SMIM4-204ENST00000482728 ST20-MTHFSA0A0A6YYL1 179 aa25.9■■□□□ 1.74
SMIM4-204ENST00000482728 SBNO2Q9Y2G9 1366 aa25.9■■□□□ 1.74
SMIM4-204ENST00000482728 SLC24A1O60721 1099 aa25.89■■□□□ 1.74
SMIM4-204ENST00000482728 POLR3AO14802 1390 aaPredicted RBP25.89■■□□□ 1.74
SMIM4-204ENST00000482728 COL22A1Q8NFW1 1626 aaPredicted RBP25.88■■□□□ 1.73
SMIM4-204ENST00000482728 POTEAQ6S8J7 498 aa25.88■■□□□ 1.73
SMIM4-204ENST00000482728 AFF2P51816 1311 aa25.88■■□□□ 1.73
SMIM4-204ENST00000482728 CABLES1Q8TDN4 633 aa25.87■■□□□ 1.73
SMIM4-204ENST00000482728 ATAD2Q6PL18 1390 aa25.84■■□□□ 1.73
SMIM4-204ENST00000482728 USP47Q96K76 1375 aa25.84■■□□□ 1.73
SMIM4-204ENST00000482728 TOPAZ1Q8N9V7 1692 aa25.84■■□□□ 1.73
SMIM4-204ENST00000482728 TESK2Q96S53 571 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms