RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NRXN1Q9ULB1 1477 aa28.99■■■□□ 2.23
MSH5-215ENST00000482280 NUTM2BA6NNL0 878 aaPredicted RBP28.97■■■□□ 2.23
MSH5-215ENST00000482280 NUTM2EB1AL46 878 aaPredicted RBP28.97■■■□□ 2.23
MSH5-215ENST00000482280 NUTM2AQ8IVF1 878 aaPredicted RBP28.97■■■□□ 2.23
MSH5-215ENST00000482280 CDC42BPGQ6DT37 1551 aa28.96■■■□□ 2.23
MSH5-215ENST00000482280 NHSL1Q5SYE7 1610 aa28.96■■■□□ 2.23
MSH5-215ENST00000482280 ESCO1Q5FWF5 840 aa28.96■■■□□ 2.23
MSH5-215ENST00000482280 ORAI2Q96SN7 254 aa28.96■■■□□ 2.23
MSH5-215ENST00000482280 SHPRHQ149N8 1683 aa28.96■■■□□ 2.23
MSH5-215ENST00000482280 KNDC1Q76NI1 1749 aa28.95■■■□□ 2.23
MSH5-215ENST00000482280 DDX17Q92841 729 aaKnown RBP28.95■■■□□ 2.22
MSH5-215ENST00000482280 SIRT1Q96EB6 747 aa28.95■■■□□ 2.22
MSH5-215ENST00000482280 RGS17Q9UGC6 210 aaPredicted RBP28.95■■■□□ 2.22
MSH5-215ENST00000482280 POGKQ9P215 609 aa28.93■■■□□ 2.22
MSH5-215ENST00000482280 PLEKHH1Q9ULM0 1364 aa28.91■■■□□ 2.22
MSH5-215ENST00000482280 NUTM2FA1L443 756 aa28.9■■■□□ 2.22
MSH5-215ENST00000482280 NPHP3Q7Z494 1330 aa28.9■■■□□ 2.22
MSH5-215ENST00000482280 ZNF772Q68DY9 489 aaPredicted RBP28.89■■■□□ 2.22
MSH5-215ENST00000482280 PRAM1Q96QH2 718 aa28.89■■■□□ 2.22
MSH5-215ENST00000482280 LRP6O75581 1613 aa28.87■■■□□ 2.21
MSH5-215ENST00000482280 SAFB2Q14151 953 aaKnown RBP eCLIP28.87■■■□□ 2.21
MSH5-215ENST00000482280 POTEAQ6S8J7 498 aa28.86■■■□□ 2.21
MSH5-215ENST00000482280 SOS2Q07890 1332 aaPredicted RBP28.85■■■□□ 2.21
MSH5-215ENST00000482280 PNPLA6Q8IY17 1366 aa28.85■■■□□ 2.21
MSH5-215ENST00000482280 TRAK1Q9UPV9 953 aa28.84■■■□□ 2.21
MSH5-215ENST00000482280 FOXO3O43524 673 aa28.82■■■□□ 2.2
MSH5-215ENST00000482280 DLC1Q96QB1 1528 aa28.81■■■□□ 2.2
MSH5-215ENST00000482280 C8orf37Q96NL8 207 aa28.78■■■□□ 2.2
MSH5-215ENST00000482280 ADGRB1O14514 1584 aa28.77■■■□□ 2.2
MSH5-215ENST00000482280 FMN2Q9NZ56 1722 aa28.77■■■□□ 2.2
MSH5-215ENST00000482280 ADAMTS2O95450 1211 aa28.76■■■□□ 2.19
MSH5-215ENST00000482280 XPCQ01831 940 aaPredicted RBP28.76■■■□□ 2.19
MSH5-215ENST00000482280 AFF2P51816 1311 aa28.74■■■□□ 2.19
MSH5-215ENST00000482280 EIF3AQ14152 1382 aaKnown RBP28.74■■■□□ 2.19
MSH5-215ENST00000482280 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
MSH5-215ENST00000482280 PHF8Q9UPP1 1060 aa28.73■■■□□ 2.19
MSH5-215ENST00000482280 KIF1AQ12756 1690 aa28.73■■■□□ 2.19
MSH5-215ENST00000482280 PSME1Q06323 249 aa28.72■■■□□ 2.19
MSH5-215ENST00000482280 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
MSH5-215ENST00000482280 MINK1Q8N4C8 1332 aaPredicted RBP28.71■■■□□ 2.19
MSH5-215ENST00000482280 PXDNQ92626 1479 aa28.7■■■□□ 2.18
MSH5-215ENST00000482280 RXRBP28702 533 aa28.69■■■□□ 2.18
MSH5-215ENST00000482280 KRT28Q7Z3Y7 464 aa28.69■■■□□ 2.18
MSH5-215ENST00000482280 ANKARQ7Z5J8 1434 aa28.68■■■□□ 2.18
MSH5-215ENST00000482280 ADGRB2O60241 1585 aa28.66■■■□□ 2.18
MSH5-215ENST00000482280 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
MSH5-215ENST00000482280 WASLO00401 505 aaPredicted RBP28.64■■■□□ 2.18
MSH5-215ENST00000482280 NEUROD1Q13562 356 aa28.64■■■□□ 2.18
MSH5-215ENST00000482280 LMOD2Q6P5Q4 547 aa28.63■■■□□ 2.17
MSH5-215ENST00000482280 COL22A1Q8NFW1 1626 aaPredicted RBP28.62■■■□□ 2.17
MSH5-215ENST00000482280 PMFBP1Q8TBY8 1022 aa28.62■■■□□ 2.17
MSH5-215ENST00000482280 QTRT2Q9H974 415 aaKnown RBP28.62■■■□□ 2.17
MSH5-215ENST00000482280 SPATA31A3Q5VYP0 1347 aa28.62■■■□□ 2.17
MSH5-215ENST00000482280 USP21Q9UK80 565 aa28.6■■■□□ 2.17
MSH5-215ENST00000482280 KIAA1210Q9ULL0 1709 aa28.6■■■□□ 2.17
MSH5-215ENST00000482280 L3MBTL2Q969R5 705 aa28.59■■■□□ 2.17
MSH5-215ENST00000482280 SIN3AQ96ST3 1273 aa28.59■■■□□ 2.17
MSH5-215ENST00000482280 GPRASP1Q5JY77 1395 aa28.59■■■□□ 2.17
MSH5-215ENST00000482280 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
MSH5-215ENST00000482280 TULP4Q9NRJ4 1543 aa28.58■■■□□ 2.17
MSH5-215ENST00000482280 RBM6P78332 1123 aaKnown RBP28.57■■■□□ 2.16
MSH5-215ENST00000482280 NGDNQ8NEJ9 315 aaKnown RBP28.57■■■□□ 2.16
MSH5-215ENST00000482280 TNS3Q68CZ2 1445 aa28.57■■■□□ 2.16
MSH5-215ENST00000482280 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
MSH5-215ENST00000482280 ARHGEF28Q8N1W1 1705 aaKnown RBP28.56■■■□□ 2.16
MSH5-215ENST00000482280 SBNO1A3KN83 1393 aa28.55■■■□□ 2.16
MSH5-215ENST00000482280 ARHGEF10O15013 1369 aa28.55■■■□□ 2.16
MSH5-215ENST00000482280 NBPF1Q3BBV0 1214 aa28.55■■■□□ 2.16
MSH5-215ENST00000482280 PLEKHG5O94827 1062 aa28.54■■■□□ 2.16
MSH5-215ENST00000482280 TRPC5Q9UL62 973 aaPredicted RBP28.54■■■□□ 2.16
MSH5-215ENST00000482280 FNBP4Q8N3X1 1017 aaPredicted RBP28.52■■■□□ 2.16
MSH5-215ENST00000482280 CDK12Q9NYV4 1490 aaPredicted RBP28.52■■■□□ 2.16
MSH5-215ENST00000482280 USP32Q8NFA0 1604 aa28.51■■■□□ 2.15
MSH5-215ENST00000482280 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
MSH5-215ENST00000482280 PRR36Q9H6K5 1346 aa28.5■■■□□ 2.15
MSH5-215ENST00000482280 NUDT16Q96DE0 195 aaKnown RBP28.5■■■□□ 2.15
MSH5-215ENST00000482280 CENPJQ9HC77 1338 aaPredicted RBP28.49■■■□□ 2.15
MSH5-215ENST00000482280 PAK3O75914 559 aaPredicted RBP28.48■■■□□ 2.15
MSH5-215ENST00000482280 SRPK2P78362 688 aaKnown RBP28.46■■■□□ 2.15
MSH5-215ENST00000482280 CABLES1Q8TDN4 633 aa28.45■■■□□ 2.14
MSH5-215ENST00000482280 ROCK2O75116 1388 aaKnown RBP28.45■■■□□ 2.14
MSH5-215ENST00000482280 ITSN1Q15811 1721 aa28.44■■■□□ 2.14
MSH5-215ENST00000482280 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
MSH5-215ENST00000482280 ATP7BP35670 1465 aa28.42■■■□□ 2.14
MSH5-215ENST00000482280 TONSLQ96HA7 1378 aa28.42■■■□□ 2.14
MSH5-215ENST00000482280 MARF1Q9Y4F3 1742 aaKnown RBP28.42■■■□□ 2.14
MSH5-215ENST00000482280 ATRNO75882 1429 aa28.4■■■□□ 2.14
MSH5-215ENST00000482280 RGS12O14924 1447 aa28.39■■■□□ 2.14
MSH5-215ENST00000482280 UNC5CLQ8IV45 518 aa28.39■■■□□ 2.14
MSH5-215ENST00000482280 BCL9LQ86UU0 1499 aa28.38■■■□□ 2.13
MSH5-215ENST00000482280 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
MSH5-215ENST00000482280 GJD4Q96KN9 370 aaPredicted RBP28.35■■■□□ 2.13
MSH5-215ENST00000482280 CCDC9Q9Y3X0 531 aaKnown RBP28.35■■■□□ 2.13
MSH5-215ENST00000482280 ACEP12821 1306 aa28.35■■■□□ 2.13
MSH5-215ENST00000482280 CABP2Q9NPB3 220 aa28.34■■■□□ 2.13
MSH5-215ENST00000482280 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
MSH5-215ENST00000482280 TRPM3Q9HCF6 1732 aaPredicted RBP28.34■■■□□ 2.13
MSH5-215ENST00000482280 QRICH2Q9H0J4 1663 aa28.33■■■□□ 2.13
MSH5-215ENST00000482280 PLEKHG3A1L390 1219 aa28.33■■■□□ 2.13
MSH5-215ENST00000482280 UPF1Q92900 1129 aaKnown RBP eCLIP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms