RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
GARNL3-217ENST00000481875 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
GARNL3-217ENST00000481875 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.35
GARNL3-217ENST00000481875 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
GARNL3-217ENST00000481875 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
GARNL3-217ENST00000481875 ORAI2Q96SN7 254 aa17.26■□□□□ 0.35
GARNL3-217ENST00000481875 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
GARNL3-217ENST00000481875 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
GARNL3-217ENST00000481875 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
GARNL3-217ENST00000481875 KNDC1Q76NI1 1749 aa17.24■□□□□ 0.35
GARNL3-217ENST00000481875 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
GARNL3-217ENST00000481875 RBM6P78332 1123 aaKnown RBP17.23■□□□□ 0.35
GARNL3-217ENST00000481875 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
GARNL3-217ENST00000481875 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
GARNL3-217ENST00000481875 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
GARNL3-217ENST00000481875 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
GARNL3-217ENST00000481875 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
GARNL3-217ENST00000481875 FNBP4Q8N3X1 1017 aaPredicted RBP17.21■□□□□ 0.35
GARNL3-217ENST00000481875 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
GARNL3-217ENST00000481875 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
GARNL3-217ENST00000481875 PXDNQ92626 1479 aa17.19■□□□□ 0.34
GARNL3-217ENST00000481875 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
GARNL3-217ENST00000481875 MYOM2P54296 1465 aa17.18■□□□□ 0.34
GARNL3-217ENST00000481875 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
GARNL3-217ENST00000481875 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
GARNL3-217ENST00000481875 C14orf93Q9H972 538 aaKnown RBP17.17■□□□□ 0.34
GARNL3-217ENST00000481875 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
GARNL3-217ENST00000481875 RGS12O14924 1447 aa17.16■□□□□ 0.34
GARNL3-217ENST00000481875 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
GARNL3-217ENST00000481875 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
GARNL3-217ENST00000481875 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
GARNL3-217ENST00000481875 EP400Q96L91 3159 aa17.15■□□□□ 0.34
GARNL3-217ENST00000481875 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
GARNL3-217ENST00000481875 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
GARNL3-217ENST00000481875 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-217ENST00000481875 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
GARNL3-217ENST00000481875 FOXO3O43524 673 aa17.13■□□□□ 0.33
GARNL3-217ENST00000481875 USP21Q9UK80 565 aa17.13■□□□□ 0.33
GARNL3-217ENST00000481875 ATRNO75882 1429 aa17.13■□□□□ 0.33
GARNL3-217ENST00000481875 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
GARNL3-217ENST00000481875 STK26Q9P289 416 aa17.12■□□□□ 0.33
GARNL3-217ENST00000481875 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
GARNL3-217ENST00000481875 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
GARNL3-217ENST00000481875 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
GARNL3-217ENST00000481875 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
GARNL3-217ENST00000481875 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
GARNL3-217ENST00000481875 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
GARNL3-217ENST00000481875 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
GARNL3-217ENST00000481875 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
GARNL3-217ENST00000481875 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
GARNL3-217ENST00000481875 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
GARNL3-217ENST00000481875 HRCP23327 699 aa17.06■□□□□ 0.32
GARNL3-217ENST00000481875 SLIT2O94813 1529 aa17.06■□□□□ 0.32
GARNL3-217ENST00000481875 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
GARNL3-217ENST00000481875 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
GARNL3-217ENST00000481875 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
GARNL3-217ENST00000481875 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
GARNL3-217ENST00000481875 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
GARNL3-217ENST00000481875 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
GARNL3-217ENST00000481875 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
GARNL3-217ENST00000481875 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
GARNL3-217ENST00000481875 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
GARNL3-217ENST00000481875 PSME1Q06323 249 aa17.03■□□□□ 0.32
GARNL3-217ENST00000481875 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
GARNL3-217ENST00000481875 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
GARNL3-217ENST00000481875 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
GARNL3-217ENST00000481875 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
GARNL3-217ENST00000481875 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
GARNL3-217ENST00000481875 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
GARNL3-217ENST00000481875 PRAM1Q96QH2 718 aa17■□□□□ 0.31
GARNL3-217ENST00000481875 NWD2Q9ULI1 1742 aa17■□□□□ 0.31
GARNL3-217ENST00000481875 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
GARNL3-217ENST00000481875 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
GARNL3-217ENST00000481875 GLI3P10071 1580 aa16.98■□□□□ 0.31
GARNL3-217ENST00000481875 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
GARNL3-217ENST00000481875 EIF3AQ14152 1382 aaKnown RBP16.97■□□□□ 0.31
GARNL3-217ENST00000481875 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
GARNL3-217ENST00000481875 POGKQ9P215 609 aa16.96■□□□□ 0.31
GARNL3-217ENST00000481875 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.3
GARNL3-217ENST00000481875 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
GARNL3-217ENST00000481875 VPS72Q15906 364 aa16.95■□□□□ 0.3
GARNL3-217ENST00000481875 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
GARNL3-217ENST00000481875 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
GARNL3-217ENST00000481875 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
GARNL3-217ENST00000481875 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
GARNL3-217ENST00000481875 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
GARNL3-217ENST00000481875 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
GARNL3-217ENST00000481875 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-217ENST00000481875 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-217ENST00000481875 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
GARNL3-217ENST00000481875 CABLES1Q8TDN4 633 aa16.9■□□□□ 0.3
GARNL3-217ENST00000481875 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
GARNL3-217ENST00000481875 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
GARNL3-217ENST00000481875 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.3
GARNL3-217ENST00000481875 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
GARNL3-217ENST00000481875 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
GARNL3-217ENST00000481875 ARHGEF28Q8N1W1 1705 aaKnown RBP16.89■□□□□ 0.29
GARNL3-217ENST00000481875 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
GARNL3-217ENST00000481875 NRAPQ86VF7 1730 aa16.88■□□□□ 0.29
GARNL3-217ENST00000481875 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms