RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 C1orf167Q5SNV9 1468 aa29.91■■■□□ 2.38
PTPN18-211ENST00000481492 PHLPP1O60346 1717 aa29.88■■■□□ 2.37
PTPN18-211ENST00000481492 ORAI2Q96SN7 254 aa29.88■■■□□ 2.37
PTPN18-211ENST00000481492 COL16A1Q07092 1604 aaPredicted RBP29.87■■■□□ 2.37
PTPN18-211ENST00000481492 AHDC1Q5TGY3 1603 aaPredicted RBP29.87■■■□□ 2.37
PTPN18-211ENST00000481492 DDX17Q92841 729 aaKnown RBP29.87■■■□□ 2.37
PTPN18-211ENST00000481492 L3MBTL2Q969R5 705 aa29.86■■■□□ 2.37
PTPN18-211ENST00000481492 PRAM1Q96QH2 718 aa29.86■■■□□ 2.37
PTPN18-211ENST00000481492 NEUROD1Q13562 356 aa29.84■■■□□ 2.37
PTPN18-211ENST00000481492 TRAK1Q9UPV9 953 aa29.84■■■□□ 2.37
PTPN18-211ENST00000481492 CDC42BPGQ6DT37 1551 aa29.82■■■□□ 2.36
PTPN18-211ENST00000481492 SAFB2Q14151 953 aaKnown RBP eCLIP29.81■■■□□ 2.36
PTPN18-211ENST00000481492 DLC1Q96QB1 1528 aa29.81■■■□□ 2.36
PTPN18-211ENST00000481492 JCADQ9P266 1359 aa29.8■■■□□ 2.36
PTPN18-211ENST00000481492 NUTM2FA1L443 756 aa29.79■■■□□ 2.36
PTPN18-211ENST00000481492 NBPF1Q3BBV0 1214 aa29.78■■■□□ 2.36
PTPN18-211ENST00000481492 NHSL1Q5SYE7 1610 aa29.77■■■□□ 2.36
PTPN18-211ENST00000481492 POGKQ9P215 609 aa29.77■■■□□ 2.36
PTPN18-211ENST00000481492 ESCO1Q5FWF5 840 aa29.75■■■□□ 2.35
PTPN18-211ENST00000481492 POTEAQ6S8J7 498 aa29.75■■■□□ 2.35
PTPN18-211ENST00000481492 FMN2Q9NZ56 1722 aa29.7■■■□□ 2.35
PTPN18-211ENST00000481492 SOS2Q07890 1332 aaPredicted RBP29.7■■■□□ 2.35
PTPN18-211ENST00000481492 LRRC59Q96AG4 307 aaKnown RBP29.69■■■□□ 2.34
PTPN18-211ENST00000481492 HIRIP3Q9BW71 556 aaPredicted RBP29.69■■■□□ 2.34
PTPN18-211ENST00000481492 KIAA1210Q9ULL0 1709 aa29.69■■■□□ 2.34
PTPN18-211ENST00000481492 MINK1Q8N4C8 1332 aaPredicted RBP29.68■■■□□ 2.34
PTPN18-211ENST00000481492 FOXO3O43524 673 aa29.66■■■□□ 2.34
PTPN18-211ENST00000481492 LRP6O75581 1613 aa29.66■■■□□ 2.34
PTPN18-211ENST00000481492 SPATA31A6Q5VVP1 1343 aa29.65■■■□□ 2.34
PTPN18-211ENST00000481492 SHPRHQ149N8 1683 aa29.65■■■□□ 2.34
PTPN18-211ENST00000481492 NBPF8Q3BBV2 869 aa29.64■■■□□ 2.33
PTPN18-211ENST00000481492 ARHGEF28Q8N1W1 1705 aaKnown RBP29.63■■■□□ 2.33
PTPN18-211ENST00000481492 PNPLA6Q8IY17 1366 aa29.62■■■□□ 2.33
PTPN18-211ENST00000481492 ADGRB2O60241 1585 aa29.62■■■□□ 2.33
PTPN18-211ENST00000481492 XPCQ01831 940 aaPredicted RBP29.62■■■□□ 2.33
PTPN18-211ENST00000481492 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
PTPN18-211ENST00000481492 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
PTPN18-211ENST00000481492 PXDNQ92626 1479 aa29.6■■■□□ 2.33
PTPN18-211ENST00000481492 WASLO00401 505 aaPredicted RBP29.6■■■□□ 2.33
PTPN18-211ENST00000481492 PRR36Q9H6K5 1346 aa29.6■■■□□ 2.33
PTPN18-211ENST00000481492 RGPD8O14715 1765 aaPredicted RBP29.59■■■□□ 2.33
PTPN18-211ENST00000481492 USP32Q8NFA0 1604 aa29.58■■■□□ 2.33
PTPN18-211ENST00000481492 NUTM2BA6NNL0 878 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-211ENST00000481492 NUTM2EB1AL46 878 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-211ENST00000481492 NUTM2AQ8IVF1 878 aaPredicted RBP29.58■■■□□ 2.33
PTPN18-211ENST00000481492 PHF8Q9UPP1 1060 aa29.58■■■□□ 2.33
PTPN18-211ENST00000481492 ANKARQ7Z5J8 1434 aa29.55■■■□□ 2.32
PTPN18-211ENST00000481492 TRPM1Q7Z4N2 1603 aa29.55■■■□□ 2.32
PTPN18-211ENST00000481492 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
PTPN18-211ENST00000481492 KRT28Q7Z3Y7 464 aa29.52■■■□□ 2.32
PTPN18-211ENST00000481492 CDK19Q9BWU1 502 aa29.51■■■□□ 2.31
PTPN18-211ENST00000481492 TONSLQ96HA7 1378 aa29.5■■■□□ 2.31
PTPN18-211ENST00000481492 KIF1AQ12756 1690 aa29.5■■■□□ 2.31
PTPN18-211ENST00000481492 TULP4Q9NRJ4 1543 aa29.49■■■□□ 2.31
PTPN18-211ENST00000481492 CENPJQ9HC77 1338 aaPredicted RBP29.48■■■□□ 2.31
PTPN18-211ENST00000481492 MEX3CQ5U5Q3 659 aaKnown RBP29.48■■■□□ 2.31
PTPN18-211ENST00000481492 SPATA31A3Q5VYP0 1347 aa29.47■■■□□ 2.31
PTPN18-211ENST00000481492 NUDT16Q96DE0 195 aaKnown RBP29.47■■■□□ 2.31
PTPN18-211ENST00000481492 ROCK2O75116 1388 aaKnown RBP29.47■■■□□ 2.31
PTPN18-211ENST00000481492 EIF3AQ14152 1382 aaKnown RBP29.45■■■□□ 2.3
PTPN18-211ENST00000481492 GPRASP1Q5JY77 1395 aa29.45■■■□□ 2.3
PTPN18-211ENST00000481492 ATP7BP35670 1465 aa29.43■■■□□ 2.3
PTPN18-211ENST00000481492 ADAMTS2O95450 1211 aa29.42■■■□□ 2.3
PTPN18-211ENST00000481492 PSME1Q06323 249 aa29.42■■■□□ 2.3
PTPN18-211ENST00000481492 COL22A1Q8NFW1 1626 aaPredicted RBP29.42■■■□□ 2.3
PTPN18-211ENST00000481492 SBNO1A3KN83 1393 aa29.38■■■□□ 2.29
PTPN18-211ENST00000481492 C8orf37Q96NL8 207 aa29.38■■■□□ 2.29
PTPN18-211ENST00000481492 AFF2P51816 1311 aa29.37■■■□□ 2.29
PTPN18-211ENST00000481492 CABP2Q9NPB3 220 aa29.37■■■□□ 2.29
PTPN18-211ENST00000481492 CCDC61Q9Y6R9 512 aa29.36■■■□□ 2.29
PTPN18-211ENST00000481492 TNS3Q68CZ2 1445 aa29.35■■■□□ 2.29
PTPN18-211ENST00000481492 RALGAPBQ86X10 1494 aa29.35■■■□□ 2.29
PTPN18-211ENST00000481492 QRICH2Q9H0J4 1663 aa29.35■■■□□ 2.29
PTPN18-211ENST00000481492 NGDNQ8NEJ9 315 aaKnown RBP29.35■■■□□ 2.29
PTPN18-211ENST00000481492 CARD11Q9BXL7 1154 aa29.35■■■□□ 2.29
PTPN18-211ENST00000481492 ZNF772Q68DY9 489 aaPredicted RBP29.34■■■□□ 2.29
PTPN18-211ENST00000481492 PLEKHG3A1L390 1219 aa29.33■■■□□ 2.29
PTPN18-211ENST00000481492 CABLES1Q8TDN4 633 aa29.33■■■□□ 2.29
PTPN18-211ENST00000481492 SRPK2P78362 688 aaKnown RBP29.32■■■□□ 2.28
PTPN18-211ENST00000481492 NGLY1Q96IV0 654 aa29.32■■■□□ 2.28
PTPN18-211ENST00000481492 TRPM3Q9HCF6 1732 aaPredicted RBP29.31■■■□□ 2.28
PTPN18-211ENST00000481492 ACEP12821 1306 aa29.3■■■□□ 2.28
PTPN18-211ENST00000481492 CLSPNQ9HAW4 1339 aa29.3■■■□□ 2.28
PTPN18-211ENST00000481492 POLR3AO14802 1390 aaPredicted RBP29.29■■■□□ 2.28
PTPN18-211ENST00000481492 LMOD2Q6P5Q4 547 aa29.29■■■□□ 2.28
PTPN18-211ENST00000481492 TOPAZ1Q8N9V7 1692 aa29.29■■■□□ 2.28
PTPN18-211ENST00000481492 FNBP4Q8N3X1 1017 aaPredicted RBP29.28■■■□□ 2.28
PTPN18-211ENST00000481492 ITSN1Q15811 1721 aa29.27■■■□□ 2.28
PTPN18-211ENST00000481492 PLEKHG5O94827 1062 aa29.26■■■□□ 2.28
PTPN18-211ENST00000481492 EVC2Q86UK5 1308 aa29.26■■■□□ 2.27
PTPN18-211ENST00000481492 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
PTPN18-211ENST00000481492 UPF1Q92900 1129 aaKnown RBP eCLIP29.25■■■□□ 2.272e-10■□□□□ 8.9
PTPN18-211ENST00000481492 CABP1Q9NZU7 370 aa29.25■■■□□ 2.27
PTPN18-211ENST00000481492 PPIP5K1Q6PFW1 1433 aa29.24■■■□□ 2.27
PTPN18-211ENST00000481492 QTRT2Q9H974 415 aaKnown RBP29.24■■■□□ 2.27
PTPN18-211ENST00000481492 ALS2Q96Q42 1657 aa29.24■■■□□ 2.27
PTPN18-211ENST00000481492 PAK3O75914 559 aaPredicted RBP29.22■■■□□ 2.27
PTPN18-211ENST00000481492 USP21Q9UK80 565 aa29.21■■■□□ 2.27
PTPN18-211ENST00000481492 TIMELESSQ9UNS1 1208 aa29.21■■■□□ 2.27
PTPN18-211ENST00000481492 SBNO2Q9Y2G9 1366 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms