RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RWDD1Q9H446 243 aaPredicted RBP24.48■■□□□ 1.51
CCM2-214ENST00000481194 ABCA9Q8IUA7 1624 aa24.48■■□□□ 1.51
CCM2-214ENST00000481194 RIPK4P57078 832 aa24.47■■□□□ 1.51
CCM2-214ENST00000481194 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
CCM2-214ENST00000481194 ITPRIPQ8IWB1 547 aa24.46■■□□□ 1.51
CCM2-214ENST00000481194 TEFQ10587 303 aa24.45■■□□□ 1.5
CCM2-214ENST00000481194 WAPLQ7Z5K2 1190 aa24.45■■□□□ 1.5
CCM2-214ENST00000481194 GNAI1P63096 354 aa24.44■■□□□ 1.5
CCM2-214ENST00000481194 BECN1Q14457 450 aa24.43■■□□□ 1.5
CCM2-214ENST00000481194 YEATS2Q9ULM3 1422 aa24.42■■□□□ 1.5
CCM2-214ENST00000481194 NPHP1O15259 732 aa24.42■■□□□ 1.5
CCM2-214ENST00000481194 RAPGEF4Q8WZA2 1011 aa24.42■■□□□ 1.5
CCM2-214ENST00000481194 GAS2L2Q8NHY3 880 aa24.41■■□□□ 1.5
CCM2-214ENST00000481194 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
CCM2-214ENST00000481194 ADAMTS8Q9UP79 889 aa24.4■■□□□ 1.5
CCM2-214ENST00000481194 DISP3Q9P2K9 1392 aa24.38■■□□□ 1.49
CCM2-214ENST00000481194 CROCC2H7BZ55 1655 aa24.38■■□□□ 1.49
CCM2-214ENST00000481194 KCNH5Q8NCM2 988 aa24.38■■□□□ 1.49
CCM2-214ENST00000481194 HMMRO75330 724 aa24.38■■□□□ 1.49
CCM2-214ENST00000481194 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
CCM2-214ENST00000481194 TRPM2O94759 1503 aa24.37■■□□□ 1.49
CCM2-214ENST00000481194 ZKSCAN2Q63HK3 967 aa24.37■■□□□ 1.49
CCM2-214ENST00000481194 NPATQ14207 1427 aa24.36■■□□□ 1.49
CCM2-214ENST00000481194 RRP1P56182 461 aaKnown RBP24.35■■□□□ 1.49
CCM2-214ENST00000481194 C11orf95C9JLR9 678 aaPredicted RBP24.35■■□□□ 1.49
CCM2-214ENST00000481194 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
CCM2-214ENST00000481194 TTC5Q8N0Z6 440 aa24.35■■□□□ 1.49
CCM2-214ENST00000481194 PNISRQ8TF01 805 aaKnown RBP24.35■■□□□ 1.49
CCM2-214ENST00000481194 RGS3P49796 1198 aa24.35■■□□□ 1.49
CCM2-214ENST00000481194 HMOX1P09601 288 aa24.34■■□□□ 1.49
CCM2-214ENST00000481194 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.48
CCM2-214ENST00000481194 TSPOAP1O95153 1857 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 PHF8Q9UPP1 1060 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 ANKRD36BQ8N2N9 1353 aa24.32■■□□□ 1.48
CCM2-214ENST00000481194 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
CCM2-214ENST00000481194 NLRP2Q9NX02 1062 aa24.31■■□□□ 1.48
CCM2-214ENST00000481194 TET3O43151 1660 aa24.31■■□□□ 1.48
CCM2-214ENST00000481194 IQGAP3Q86VI3 1631 aa24.3■■□□□ 1.48
CCM2-214ENST00000481194 AAMPQ13685 434 aa24.3■■□□□ 1.48
CCM2-214ENST00000481194 API5Q9BZZ5 524 aaKnown RBP24.3■■□□□ 1.48
CCM2-214ENST00000481194 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
CCM2-214ENST00000481194 KIF16BQ96L93 1317 aa24.3■■□□□ 1.48
CCM2-214ENST00000481194 KDM6BO15054 1643 aa24.29■■□□□ 1.48
CCM2-214ENST00000481194 TBX22Q9Y458 520 aa24.29■■□□□ 1.48
CCM2-214ENST00000481194 YTHDC2Q9H6S0 1430 aaKnown RBP24.29■■□□□ 1.48
CCM2-214ENST00000481194 PRKAR2BP31323 418 aa24.29■■□□□ 1.48
CCM2-214ENST00000481194 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
CCM2-214ENST00000481194 FCHSD2O94868 740 aa24.28■■□□□ 1.48
CCM2-214ENST00000481194 UNC13BO14795 1591 aa24.27■■□□□ 1.48
CCM2-214ENST00000481194 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
CCM2-214ENST00000481194 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
CCM2-214ENST00000481194 PTPRTO14522 1441 aa24.26■■□□□ 1.47
CCM2-214ENST00000481194 TSPYL4Q9UJ04 414 aa24.26■■□□□ 1.47
CCM2-214ENST00000481194 TTC21AQ8NDW8 1320 aa24.25■■□□□ 1.47
CCM2-214ENST00000481194 LRRIQ1Q96JM4 1722 aa24.25■■□□□ 1.47
CCM2-214ENST00000481194 TCERG1O14776 1098 aaKnown RBP24.25■■□□□ 1.47
CCM2-214ENST00000481194 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
CCM2-214ENST00000481194 CADPS2Q86UW7 1296 aa24.24■■□□□ 1.47
CCM2-214ENST00000481194 MYOM2P54296 1465 aa24.23■■□□□ 1.47
CCM2-214ENST00000481194 TATP17735 454 aaPredicted RBP24.23■■□□□ 1.47
CCM2-214ENST00000481194 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
CCM2-214ENST00000481194 SLC4A10Q6U841 1118 aa24.23■■□□□ 1.47
CCM2-214ENST00000481194 DDX19BQ9UMR2 479 aa24.22■■□□□ 1.47
CCM2-214ENST00000481194 ABCC3O15438 1527 aa24.22■■□□□ 1.47
CCM2-214ENST00000481194 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
CCM2-214ENST00000481194 MSH6P52701 1360 aa24.21■■□□□ 1.47
CCM2-214ENST00000481194 ZNF330Q9Y3S2 320 aaPredicted RBP24.21■■□□□ 1.47
CCM2-214ENST00000481194 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
CCM2-214ENST00000481194 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
CCM2-214ENST00000481194 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
CCM2-214ENST00000481194 PPIP5K1Q6PFW1 1433 aa24.19■■□□□ 1.46
CCM2-214ENST00000481194 SULT6B1Q6IMI4 303 aa24.19■■□□□ 1.46
CCM2-214ENST00000481194 TESK2Q96S53 571 aa24.19■■□□□ 1.46
CCM2-214ENST00000481194 GPATCH3Q96I76 525 aa24.19■■□□□ 1.46
CCM2-214ENST00000481194 EFCAB6Q5THR3 1501 aa24.19■■□□□ 1.46
CCM2-214ENST00000481194 CENPQQ7L2Z9 268 aaPredicted RBP24.19■■□□□ 1.46
CCM2-214ENST00000481194 TTC21BQ7Z4L5 1316 aa24.18■■□□□ 1.46
CCM2-214ENST00000481194 NEXNQ0ZGT2 675 aa24.18■■□□□ 1.46
CCM2-214ENST00000481194 SPG7Q9UQ90 795 aa24.18■■□□□ 1.46
CCM2-214ENST00000481194 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
CCM2-214ENST00000481194 DZIP1LQ8IYY4 767 aaKnown RBP24.17■■□□□ 1.46
CCM2-214ENST00000481194 GLI2P10070 1586 aa24.17■■□□□ 1.46
CCM2-214ENST00000481194 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
CCM2-214ENST00000481194 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
CCM2-214ENST00000481194 ABCC11Q96J66 1382 aa24.17■■□□□ 1.46
CCM2-214ENST00000481194 MCCP23508 829 aa24.16■■□□□ 1.46
CCM2-214ENST00000481194 KIF1BO60333 1816 aa24.16■■□□□ 1.46
CCM2-214ENST00000481194 NME9Q86XW9 330 aa24.16■■□□□ 1.46
CCM2-214ENST00000481194 SIRT1Q96EB6 747 aa24.16■■□□□ 1.46
CCM2-214ENST00000481194 ACEP12821 1306 aa24.16■■□□□ 1.46
CCM2-214ENST00000481194 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
CCM2-214ENST00000481194 HSP90AB1P08238 724 aaKnown RBP24.14■■□□□ 1.46
CCM2-214ENST00000481194 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.45
CCM2-214ENST00000481194 PRDM11Q9NQV5 511 aa24.13■■□□□ 1.45
CCM2-214ENST00000481194 BCL2L13Q9BXK5 485 aa24.12■■□□□ 1.45
CCM2-214ENST00000481194 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
CCM2-214ENST00000481194 CRBNQ96SW2 442 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms