RNA–Protein interactions for RNA: ENST00000481167.5

CHL1-213, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 662 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-213ENST00000481167 POGKQ9P215 609 aa29.56■■■□□ 2.32
CHL1-213ENST00000481167 PRAM1Q96QH2 718 aa29.55■■■□□ 2.32
CHL1-213ENST00000481167 C19orf44Q9H6X5 657 aa29.54■■■□□ 2.32
CHL1-213ENST00000481167 SIRT1Q96EB6 747 aa29.52■■■□□ 2.32
CHL1-213ENST00000481167 FAM135BQ49AJ0 1406 aa29.52■■■□□ 2.32
CHL1-213ENST00000481167 DLC1Q96QB1 1528 aa29.51■■■□□ 2.32
CHL1-213ENST00000481167 ATF3P18847 181 aa29.51■■■□□ 2.31
CHL1-213ENST00000481167 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
CHL1-213ENST00000481167 NALCNQ8IZF0 1738 aa29.5■■■□□ 2.31
CHL1-213ENST00000481167 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.5■■■□□ 2.31
CHL1-213ENST00000481167 RALGAPBQ86X10 1494 aa29.48■■■□□ 2.31
CHL1-213ENST00000481167 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
CHL1-213ENST00000481167 ARHGEF28Q8N1W1 1705 aaKnown RBP29.47■■■□□ 2.31
CHL1-213ENST00000481167 CADPS2Q86UW7 1296 aa29.46■■■□□ 2.31
CHL1-213ENST00000481167 MINK1Q8N4C8 1332 aaPredicted RBP29.43■■■□□ 2.3
CHL1-213ENST00000481167 GPRASP1Q5JY77 1395 aa29.42■■■□□ 2.3
CHL1-213ENST00000481167 DCCP43146 1447 aa29.41■■■□□ 2.3
CHL1-213ENST00000481167 HIRIP3Q9BW71 556 aaPredicted RBP29.41■■■□□ 2.3
CHL1-213ENST00000481167 SLAIN2Q9P270 581 aa29.4■■■□□ 2.3
CHL1-213ENST00000481167 CENPJQ9HC77 1338 aaPredicted RBP29.38■■■□□ 2.29
CHL1-213ENST00000481167 NUTM2FA1L443 756 aa29.37■■■□□ 2.29
CHL1-213ENST00000481167 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
CHL1-213ENST00000481167 CDC42BPGQ6DT37 1551 aa29.35■■■□□ 2.29
CHL1-213ENST00000481167 RGS17Q9UGC6 210 aaPredicted RBP29.35■■■□□ 2.29
CHL1-213ENST00000481167 MST1RQ04912 1400 aa29.34■■■□□ 2.29
CHL1-213ENST00000481167 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
CHL1-213ENST00000481167 ROBO1Q9Y6N7 1651 aa29.28■■■□□ 2.28
CHL1-213ENST00000481167 ADGRB2O60241 1585 aa29.28■■■□□ 2.28
CHL1-213ENST00000481167 WASLO00401 505 aaPredicted RBP29.28■■■□□ 2.28
CHL1-213ENST00000481167 C1orf167Q5SNV9 1468 aa29.28■■■□□ 2.28
CHL1-213ENST00000481167 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
CHL1-213ENST00000481167 ESCO1Q5FWF5 840 aa29.24■■■□□ 2.27
CHL1-213ENST00000481167 BRINP3Q76B58 766 aa29.24■■■□□ 2.27
CHL1-213ENST00000481167 ORAI2Q96SN7 254 aa29.24■■■□□ 2.27
CHL1-213ENST00000481167 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
CHL1-213ENST00000481167 USP47Q96K76 1375 aa29.24■■■□□ 2.27
CHL1-213ENST00000481167 ST20-MTHFSA0A0A6YYL1 179 aa29.21■■■□□ 2.27
CHL1-213ENST00000481167 SRPK2P78362 688 aaKnown RBP29.2■■■□□ 2.26
CHL1-213ENST00000481167 RGPD8O14715 1765 aaPredicted RBP29.18■■■□□ 2.26
CHL1-213ENST00000481167 TULP4Q9NRJ4 1543 aa29.17■■■□□ 2.26
CHL1-213ENST00000481167 POTEAQ6S8J7 498 aa29.17■■■□□ 2.26
CHL1-213ENST00000481167 CABP2Q9NPB3 220 aa29.17■■■□□ 2.26
CHL1-213ENST00000481167 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
CHL1-213ENST00000481167 PRR36Q9H6K5 1346 aa29.17■■■□□ 2.26
CHL1-213ENST00000481167 DDX17Q92841 729 aaKnown RBP29.16■■■□□ 2.26
CHL1-213ENST00000481167 ANKARQ7Z5J8 1434 aa29.16■■■□□ 2.26
CHL1-213ENST00000481167 NUDT16Q96DE0 195 aaKnown RBP29.15■■■□□ 2.26
CHL1-213ENST00000481167 USP32Q8NFA0 1604 aa29.15■■■□□ 2.26
CHL1-213ENST00000481167 PHF8Q9UPP1 1060 aa29.13■■■□□ 2.25
CHL1-213ENST00000481167 PMFBP1Q8TBY8 1022 aa29.12■■■□□ 2.25
CHL1-213ENST00000481167 SBNO2Q9Y2G9 1366 aa29.12■■■□□ 2.25
CHL1-213ENST00000481167 PHLPP1O60346 1717 aa29.11■■■□□ 2.25
CHL1-213ENST00000481167 EIF4G2P78344 907 aaKnown RBP eCLIP29.11■■■□□ 2.25
CHL1-213ENST00000481167 FOXO3O43524 673 aa29.1■■■□□ 2.25
CHL1-213ENST00000481167 TESK2Q96S53 571 aa29.1■■■□□ 2.25
CHL1-213ENST00000481167 ATP7BP35670 1465 aa29.1■■■□□ 2.25
CHL1-213ENST00000481167 HSPA5P11021 654 aaKnown RBP29.09■■■□□ 2.25
CHL1-213ENST00000481167 XPCQ01831 940 aaPredicted RBP29.07■■■□□ 2.24
CHL1-213ENST00000481167 AHDC1Q5TGY3 1603 aaPredicted RBP29.07■■■□□ 2.24
CHL1-213ENST00000481167 KIF1AQ12756 1690 aa29.06■■■□□ 2.24
CHL1-213ENST00000481167 NHSL1Q5SYE7 1610 aa29.06■■■□□ 2.24
CHL1-213ENST00000481167 CCDC61Q9Y6R9 512 aa29.06■■■□□ 2.24
CHL1-213ENST00000481167 NPHP3Q7Z494 1330 aa29.05■■■□□ 2.24
CHL1-213ENST00000481167 ITSN1Q15811 1721 aa29.05■■■□□ 2.24
CHL1-213ENST00000481167 NGDNQ8NEJ9 315 aaKnown RBP29.04■■■□□ 2.24
CHL1-213ENST00000481167 SLC24A1O60721 1099 aa29.03■■■□□ 2.24
CHL1-213ENST00000481167 TMF1P82094 1093 aa29.03■■■□□ 2.24
CHL1-213ENST00000481167 PPIP5K1Q6PFW1 1433 aa29.02■■■□□ 2.24
CHL1-213ENST00000481167 COL16A1Q07092 1604 aaPredicted RBP29.02■■■□□ 2.24
CHL1-213ENST00000481167 TOPAZ1Q8N9V7 1692 aa29■■■□□ 2.23
CHL1-213ENST00000481167 PSME1Q06323 249 aa29■■■□□ 2.23
CHL1-213ENST00000481167 KRT28Q7Z3Y7 464 aa29■■■□□ 2.23
CHL1-213ENST00000481167 CABP1Q9NZU7 370 aa28.99■■■□□ 2.23
CHL1-213ENST00000481167 ATAD2Q6PL18 1390 aa28.99■■■□□ 2.23
CHL1-213ENST00000481167 SOS2Q07890 1332 aaPredicted RBP28.98■■■□□ 2.23
CHL1-213ENST00000481167 ZEB1P37275 1124 aaPredicted RBP28.97■■■□□ 2.23
CHL1-213ENST00000481167 JCADQ9P266 1359 aa28.97■■■□□ 2.23
CHL1-213ENST00000481167 ACEP12821 1306 aa28.96■■■□□ 2.23
CHL1-213ENST00000481167 TMC1Q8TDI8 760 aa28.96■■■□□ 2.23
CHL1-213ENST00000481167 LRRC59Q96AG4 307 aaKnown RBP28.96■■■□□ 2.23
CHL1-213ENST00000481167 PLEKHG3A1L390 1219 aa28.95■■■□□ 2.22
CHL1-213ENST00000481167 PXDNQ92626 1479 aa28.95■■■□□ 2.22
CHL1-213ENST00000481167 POLR3GLQ9BT43 218 aa28.93■■■□□ 2.22
CHL1-213ENST00000481167 CDCA8Q53HL2 280 aa28.92■■■□□ 2.22
CHL1-213ENST00000481167 PUS7Q96PZ0 661 aaKnown RBP28.91■■■□□ 2.22
CHL1-213ENST00000481167 LMOD2Q6P5Q4 547 aa28.9■■■□□ 2.22
CHL1-213ENST00000481167 POLR3AO14802 1390 aaPredicted RBP28.89■■■□□ 2.22
CHL1-213ENST00000481167 PAK3O75914 559 aaPredicted RBP28.89■■■□□ 2.22
CHL1-213ENST00000481167 SLC12A5Q9H2X9 1139 aa28.88■■■□□ 2.21
CHL1-213ENST00000481167 LRP6O75581 1613 aa28.87■■■□□ 2.21
CHL1-213ENST00000481167 SPATA31A3Q5VYP0 1347 aa28.86■■■□□ 2.21
CHL1-213ENST00000481167 PLEKHG5O94827 1062 aa28.85■■■□□ 2.21
CHL1-213ENST00000481167 PNPLA6Q8IY17 1366 aa28.85■■■□□ 2.21
CHL1-213ENST00000481167 SBNO1A3KN83 1393 aa28.84■■■□□ 2.21
CHL1-213ENST00000481167 TNS3Q68CZ2 1445 aa28.84■■■□□ 2.21
CHL1-213ENST00000481167 SHPRHQ149N8 1683 aa28.83■■■□□ 2.21
CHL1-213ENST00000481167 NUTM2BA6NNL0 878 aaPredicted RBP28.82■■■□□ 2.2
CHL1-213ENST00000481167 NUTM2EB1AL46 878 aaPredicted RBP28.82■■■□□ 2.2
CHL1-213ENST00000481167 HDGFL2Q7Z4V5 671 aaPredicted RBP28.82■■■□□ 2.2
CHL1-213ENST00000481167 NUTM2AQ8IVF1 878 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms