RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 KNDC1Q76NI1 1749 aa29.06■■■□□ 2.24
CTSA-206ENST00000480961 HIRIP3Q9BW71 556 aaPredicted RBP29.05■■■□□ 2.24
CTSA-206ENST00000480961 DLC1Q96QB1 1528 aa29.04■■■□□ 2.24
CTSA-206ENST00000480961 MINK1Q8N4C8 1332 aaPredicted RBP29.04■■■□□ 2.24
CTSA-206ENST00000480961 NALCNQ8IZF0 1738 aa29.04■■■□□ 2.24
CTSA-206ENST00000480961 NUTM2FA1L443 756 aa29.04■■■□□ 2.24
CTSA-206ENST00000480961 KIAA1210Q9ULL0 1709 aa29.03■■■□□ 2.24
CTSA-206ENST00000480961 HSPA1LP34931 641 aa29.03■■■□□ 2.24
CTSA-206ENST00000480961 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
CTSA-206ENST00000480961 DCCP43146 1447 aa29.03■■■□□ 2.24
CTSA-206ENST00000480961 TRPM1Q7Z4N2 1603 aa29■■■□□ 2.23
CTSA-206ENST00000480961 MST1RQ04912 1400 aa29■■■□□ 2.23
CTSA-206ENST00000480961 CARD11Q9BXL7 1154 aa28.99■■■□□ 2.23
CTSA-206ENST00000480961 BRINP3Q76B58 766 aa28.97■■■□□ 2.23
CTSA-206ENST00000480961 ORAI2Q96SN7 254 aa28.96■■■□□ 2.23
CTSA-206ENST00000480961 C1orf167Q5SNV9 1468 aa28.94■■■□□ 2.22
CTSA-206ENST00000480961 RALGAPBQ86X10 1494 aa28.94■■■□□ 2.22
CTSA-206ENST00000480961 GPRASP1Q5JY77 1395 aa28.94■■■□□ 2.22
CTSA-206ENST00000480961 CENPJQ9HC77 1338 aaPredicted RBP28.94■■■□□ 2.22
CTSA-206ENST00000480961 ROBO1Q9Y6N7 1651 aa28.91■■■□□ 2.22
CTSA-206ENST00000480961 ESCO1Q5FWF5 840 aa28.91■■■□□ 2.22
CTSA-206ENST00000480961 DDX17Q92841 729 aaKnown RBP28.91■■■□□ 2.22
CTSA-206ENST00000480961 CDC42BPGQ6DT37 1551 aa28.91■■■□□ 2.22
CTSA-206ENST00000480961 ARHGEF28Q8N1W1 1705 aaKnown RBP28.9■■■□□ 2.22
CTSA-206ENST00000480961 WASLO00401 505 aaPredicted RBP28.89■■■□□ 2.22
CTSA-206ENST00000480961 CDK19Q9BWU1 502 aa28.86■■■□□ 2.21
CTSA-206ENST00000480961 PRR36Q9H6K5 1346 aa28.82■■■□□ 2.2
CTSA-206ENST00000480961 EIF3AQ14152 1382 aaKnown RBP28.82■■■□□ 2.2
CTSA-206ENST00000480961 ADGRB2O60241 1585 aa28.79■■■□□ 2.2
CTSA-206ENST00000480961 FOXO3O43524 673 aa28.79■■■□□ 2.2
CTSA-206ENST00000480961 FMN2Q9NZ56 1722 aa28.79■■■□□ 2.2
CTSA-206ENST00000480961 PMFBP1Q8TBY8 1022 aa28.78■■■□□ 2.2
CTSA-206ENST00000480961 NUDT16Q96DE0 195 aaKnown RBP28.78■■■□□ 2.2
CTSA-206ENST00000480961 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
CTSA-206ENST00000480961 SRPK2P78362 688 aaKnown RBP28.77■■■□□ 2.2
CTSA-206ENST00000480961 XPCQ01831 940 aaPredicted RBP28.77■■■□□ 2.2
CTSA-206ENST00000480961 PHF8Q9UPP1 1060 aa28.77■■■□□ 2.2
CTSA-206ENST00000480961 ST20-MTHFSA0A0A6YYL1 179 aa28.76■■■□□ 2.19
CTSA-206ENST00000480961 ANKARQ7Z5J8 1434 aa28.74■■■□□ 2.19
CTSA-206ENST00000480961 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
CTSA-206ENST00000480961 USP47Q96K76 1375 aa28.73■■■□□ 2.19
CTSA-206ENST00000480961 TULP4Q9NRJ4 1543 aa28.72■■■□□ 2.19
CTSA-206ENST00000480961 EVC2Q86UK5 1308 aa28.71■■■□□ 2.19
CTSA-206ENST00000480961 AHDC1Q5TGY3 1603 aaPredicted RBP28.71■■■□□ 2.19
CTSA-206ENST00000480961 PHLPP1O60346 1717 aa28.71■■■□□ 2.19
CTSA-206ENST00000480961 USP32Q8NFA0 1604 aa28.7■■■□□ 2.19
CTSA-206ENST00000480961 NPHP3Q7Z494 1330 aa28.69■■■□□ 2.18
CTSA-206ENST00000480961 SOS2Q07890 1332 aaPredicted RBP28.68■■■□□ 2.18
CTSA-206ENST00000480961 ATP7BP35670 1465 aa28.67■■■□□ 2.18
CTSA-206ENST00000480961 KRT28Q7Z3Y7 464 aa28.67■■■□□ 2.18
CTSA-206ENST00000480961 TESK2Q96S53 571 aa28.67■■■□□ 2.18
CTSA-206ENST00000480961 CCDC61Q9Y6R9 512 aa28.67■■■□□ 2.18
CTSA-206ENST00000480961 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
CTSA-206ENST00000480961 LRRC59Q96AG4 307 aaKnown RBP28.66■■■□□ 2.18
CTSA-206ENST00000480961 PSME1Q06323 249 aa28.65■■■□□ 2.18
CTSA-206ENST00000480961 NGDNQ8NEJ9 315 aaKnown RBP28.65■■■□□ 2.18
CTSA-206ENST00000480961 RGPD8O14715 1765 aaPredicted RBP28.65■■■□□ 2.18
CTSA-206ENST00000480961 NHSL1Q5SYE7 1610 aa28.64■■■□□ 2.18
CTSA-206ENST00000480961 JCADQ9P266 1359 aa28.63■■■□□ 2.17
CTSA-206ENST00000480961 SBNO2Q9Y2G9 1366 aa28.62■■■□□ 2.17
CTSA-206ENST00000480961 CABP1Q9NZU7 370 aa28.62■■■□□ 2.17
CTSA-206ENST00000480961 PXDNQ92626 1479 aa28.61■■■□□ 2.17
CTSA-206ENST00000480961 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
CTSA-206ENST00000480961 ACEP12821 1306 aa28.59■■■□□ 2.17
CTSA-206ENST00000480961 PPIP5K1Q6PFW1 1433 aa28.59■■■□□ 2.17
CTSA-206ENST00000480961 HSPA5P11021 654 aaKnown RBP28.58■■■□□ 2.17
CTSA-206ENST00000480961 EIF4G2P78344 907 aaKnown RBP eCLIP28.57■■■□□ 2.16
CTSA-206ENST00000480961 KIF1AQ12756 1690 aa28.57■■■□□ 2.16
CTSA-206ENST00000480961 NUTM2BA6NNL0 878 aaPredicted RBP28.56■■■□□ 2.16
CTSA-206ENST00000480961 NUTM2EB1AL46 878 aaPredicted RBP28.56■■■□□ 2.16
CTSA-206ENST00000480961 PLEKHG5O94827 1062 aa28.56■■■□□ 2.16
CTSA-206ENST00000480961 NUTM2AQ8IVF1 878 aaPredicted RBP28.56■■■□□ 2.16
CTSA-206ENST00000480961 PNPLA6Q8IY17 1366 aa28.55■■■□□ 2.16
CTSA-206ENST00000480961 LMOD2Q6P5Q4 547 aa28.55■■■□□ 2.16
CTSA-206ENST00000480961 DISP3Q9P2K9 1392 aa28.54■■■□□ 2.16
CTSA-206ENST00000480961 SPATA31A3Q5VYP0 1347 aa28.54■■■□□ 2.16
CTSA-206ENST00000480961 PAK3O75914 559 aaPredicted RBP28.53■■■□□ 2.16
CTSA-206ENST00000480961 TMF1P82094 1093 aa28.53■■■□□ 2.16
CTSA-206ENST00000480961 TMC1Q8TDI8 760 aa28.53■■■□□ 2.16
CTSA-206ENST00000480961 POLR3AO14802 1390 aaPredicted RBP28.5■■■□□ 2.15
CTSA-206ENST00000480961 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
CTSA-206ENST00000480961 SLC24A1O60721 1099 aa28.49■■■□□ 2.15
CTSA-206ENST00000480961 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
CTSA-206ENST00000480961 SBNO1A3KN83 1393 aa28.49■■■□□ 2.15
CTSA-206ENST00000480961 SPATA31A6Q5VVP1 1343 aa28.48■■■□□ 2.15
CTSA-206ENST00000480961 TOPAZ1Q8N9V7 1692 aa28.48■■■□□ 2.15
CTSA-206ENST00000480961 ITSN1Q15811 1721 aa28.46■■■□□ 2.15
CTSA-206ENST00000480961 TNS3Q68CZ2 1445 aa28.45■■■□□ 2.15
CTSA-206ENST00000480961 CABLES1Q8TDN4 633 aa28.45■■■□□ 2.14
CTSA-206ENST00000480961 PUS7Q96PZ0 661 aaKnown RBP28.45■■■□□ 2.14
CTSA-206ENST00000480961 MED1Q15648 1581 aaPredicted RBP28.44■■■□□ 2.14
CTSA-206ENST00000480961 LRP6O75581 1613 aa28.43■■■□□ 2.14
CTSA-206ENST00000480961 SHPRHQ149N8 1683 aa28.43■■■□□ 2.14
CTSA-206ENST00000480961 ADAMTS2O95450 1211 aa28.43■■■□□ 2.14
CTSA-206ENST00000480961 MEX3CQ5U5Q3 659 aaKnown RBP28.43■■■□□ 2.14
CTSA-206ENST00000480961 NUTM2GQ5VZR2 741 aa28.43■■■□□ 2.14
CTSA-206ENST00000480961 POLR3GLQ9BT43 218 aa28.43■■■□□ 2.14
CTSA-206ENST00000480961 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
CTSA-206ENST00000480961 CDCA8Q53HL2 280 aa28.39■■■□□ 2.14
CTSA-206ENST00000480961 PHF23Q9BUL5 403 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms