RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 INSRP06213 1382 aa11.35□□□□□ -0.59
SNRNP200-203ENST00000480242 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
SNRNP200-203ENST00000480242 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
SNRNP200-203ENST00000480242 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
SNRNP200-203ENST00000480242 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
SNRNP200-203ENST00000480242 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
SNRNP200-203ENST00000480242 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
SNRNP200-203ENST00000480242 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
SNRNP200-203ENST00000480242 RGPD1P0DJD0 1748 aa11.31□□□□□ -0.6
SNRNP200-203ENST00000480242 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
SNRNP200-203ENST00000480242 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
SNRNP200-203ENST00000480242 KIF1AQ12756 1690 aa11.31□□□□□ -0.6
SNRNP200-203ENST00000480242 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
SNRNP200-203ENST00000480242 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
SNRNP200-203ENST00000480242 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
SNRNP200-203ENST00000480242 ABCA3Q99758 1704 aa11.3□□□□□ -0.6
SNRNP200-203ENST00000480242 ABCC6O95255 1503 aa11.29□□□□□ -0.6
SNRNP200-203ENST00000480242 PLEKHG1Q9ULL1 1385 aa11.29□□□□□ -0.6
SNRNP200-203ENST00000480242 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
SNRNP200-203ENST00000480242 PPM1GO15355 546 aaPredicted RBP11.29□□□□□ -0.6
SNRNP200-203ENST00000480242 GSE1Q14687 1217 aa11.29□□□□□ -0.6
SNRNP200-203ENST00000480242 LMO7Q8WWI1 1683 aa11.28□□□□□ -0.6
SNRNP200-203ENST00000480242 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-203ENST00000480242 SIRT1Q96EB6 747 aa11.28□□□□□ -0.6
SNRNP200-203ENST00000480242 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-203ENST00000480242 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
SNRNP200-203ENST00000480242 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.6
SNRNP200-203ENST00000480242 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.6
SNRNP200-203ENST00000480242 NKTRP30414 1462 aaKnown RBP11.27□□□□□ -0.61
SNRNP200-203ENST00000480242 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
SNRNP200-203ENST00000480242 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
SNRNP200-203ENST00000480242 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
SNRNP200-203ENST00000480242 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-203ENST00000480242 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
SNRNP200-203ENST00000480242 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
SNRNP200-203ENST00000480242 COL22A1Q8NFW1 1626 aaPredicted RBP11.25□□□□□ -0.61
SNRNP200-203ENST00000480242 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
SNRNP200-203ENST00000480242 PDE4AP27815 886 aa11.23□□□□□ -0.61
SNRNP200-203ENST00000480242 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
SNRNP200-203ENST00000480242 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
SNRNP200-203ENST00000480242 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-203ENST00000480242 ADAMTS7Q9UKP4 1686 aa11.23□□□□□ -0.61
SNRNP200-203ENST00000480242 PIK3C2AO00443 1686 aa11.22□□□□□ -0.61
SNRNP200-203ENST00000480242 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
SNRNP200-203ENST00000480242 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
SNRNP200-203ENST00000480242 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
SNRNP200-203ENST00000480242 RAPGEF3O95398 923 aa11.21□□□□□ -0.61
SNRNP200-203ENST00000480242 NFKBIBQ15653 356 aa11.21□□□□□ -0.61
SNRNP200-203ENST00000480242 PKD2Q13563 968 aa11.21□□□□□ -0.62
SNRNP200-203ENST00000480242 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
SNRNP200-203ENST00000480242 GLIPR1L2Q4G1C9 344 aa11.2□□□□□ -0.62
SNRNP200-203ENST00000480242 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
SNRNP200-203ENST00000480242 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
SNRNP200-203ENST00000480242 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-203ENST00000480242 TNRQ92752 1358 aa11.19□□□□□ -0.62
SNRNP200-203ENST00000480242 ATP7BP35670 1465 aa11.19□□□□□ -0.62
SNRNP200-203ENST00000480242 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
SNRNP200-203ENST00000480242 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 L3MBTL2Q969R5 705 aa11.18□□□□□ -0.62
SNRNP200-203ENST00000480242 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 DCCP43146 1447 aa11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-203ENST00000480242 PLCH1Q4KWH8 1693 aa11.16□□□□□ -0.62
SNRNP200-203ENST00000480242 EXOC6Q8TAG9 804 aa11.16□□□□□ -0.62
SNRNP200-203ENST00000480242 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-203ENST00000480242 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
SNRNP200-203ENST00000480242 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 SKAP1Q86WV1 359 aa11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 TESK2Q96S53 571 aa11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 LRRC37A3O60309 1634 aa11.15□□□□□ -0.62
SNRNP200-203ENST00000480242 LTBP4Q8N2S1 1624 aa11.15□□□□□ -0.63
SNRNP200-203ENST00000480242 CICQ96RK0 1608 aaPredicted RBP11.15□□□□□ -0.63
SNRNP200-203ENST00000480242 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.63
SNRNP200-203ENST00000480242 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
SNRNP200-203ENST00000480242 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
SNRNP200-203ENST00000480242 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
SNRNP200-203ENST00000480242 COL18A1P39060 1754 aa11.13□□□□□ -0.63
SNRNP200-203ENST00000480242 SLIT3O75094 1523 aa11.13□□□□□ -0.63
SNRNP200-203ENST00000480242 YTHDC2Q9H6S0 1430 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 CCDC7Q96M83 1385 aa11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 CPSF1Q10570 1443 aaKnown RBP11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 FRAT2O75474 233 aaPredicted RBP11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 GGT6Q6P531 493 aa11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
SNRNP200-203ENST00000480242 PARP4Q9UKK3 1724 aaKnown RBP11.11□□□□□ -0.63
SNRNP200-203ENST00000480242 USP47Q96K76 1375 aa11.1□□□□□ -0.63
SNRNP200-203ENST00000480242 MLECQ14165 292 aa11.1□□□□□ -0.63
SNRNP200-203ENST00000480242 ARXQ96QS3 562 aa11.1□□□□□ -0.63
SNRNP200-203ENST00000480242 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms