RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
COL17A1-205ENST00000480127 KIF1BO60333 1816 aa10.67□□□□□ -0.7
COL17A1-205ENST00000480127 PXDNQ92626 1479 aa10.67□□□□□ -0.7
COL17A1-205ENST00000480127 NPHP3Q7Z494 1330 aa10.66□□□□□ -0.7
COL17A1-205ENST00000480127 ESCO1Q5FWF5 840 aa10.66□□□□□ -0.7
COL17A1-205ENST00000480127 GJD4Q96KN9 370 aaPredicted RBP10.66□□□□□ -0.7
COL17A1-205ENST00000480127 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
COL17A1-205ENST00000480127 FOXO3O43524 673 aa10.65□□□□□ -0.7
COL17A1-205ENST00000480127 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
COL17A1-205ENST00000480127 FOXD1Q16676 465 aa10.65□□□□□ -0.7
COL17A1-205ENST00000480127 NAIPQ13075 1403 aa10.65□□□□□ -0.7
COL17A1-205ENST00000480127 CDC42BPGQ6DT37 1551 aa10.65□□□□□ -0.71
COL17A1-205ENST00000480127 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
COL17A1-205ENST00000480127 PPLO60437 1756 aa10.62□□□□□ -0.71
COL17A1-205ENST00000480127 GLI3P10071 1580 aa10.62□□□□□ -0.71
COL17A1-205ENST00000480127 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
COL17A1-205ENST00000480127 SLIT2O94813 1529 aa10.62□□□□□ -0.71
COL17A1-205ENST00000480127 ADGRF5Q8IZF2 1346 aa10.61□□□□□ -0.71
COL17A1-205ENST00000480127 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
COL17A1-205ENST00000480127 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
COL17A1-205ENST00000480127 UNC5CLQ8IV45 518 aa10.61□□□□□ -0.71
COL17A1-205ENST00000480127 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
COL17A1-205ENST00000480127 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
COL17A1-205ENST00000480127 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
COL17A1-205ENST00000480127 TECPR2O15040 1411 aa10.6□□□□□ -0.71
COL17A1-205ENST00000480127 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
COL17A1-205ENST00000480127 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
COL17A1-205ENST00000480127 PLEKHH1Q9ULM0 1364 aa10.6□□□□□ -0.71
COL17A1-205ENST00000480127 SPATA31A3Q5VYP0 1347 aa10.59□□□□□ -0.71
COL17A1-205ENST00000480127 DEFB132Q7Z7B7 95 aa10.59□□□□□ -0.71
COL17A1-205ENST00000480127 SLC4A1APQ9BWU0 796 aaKnown RBP10.59□□□□□ -0.71
COL17A1-205ENST00000480127 STK26Q9P289 416 aa10.59□□□□□ -0.71
COL17A1-205ENST00000480127 ABCC11Q96J66 1382 aa10.58□□□□□ -0.72
COL17A1-205ENST00000480127 EP400Q96L91 3159 aa10.58□□□□□ -0.72
COL17A1-205ENST00000480127 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
COL17A1-205ENST00000480127 KRT28Q7Z3Y7 464 aa10.57□□□□□ -0.72
COL17A1-205ENST00000480127 SEPT12Q8IYM1 358 aa10.57□□□□□ -0.72
COL17A1-205ENST00000480127 USP32Q8NFA0 1604 aa10.57□□□□□ -0.72
COL17A1-205ENST00000480127 CCDC144AA2RUR9 1427 aa10.57□□□□□ -0.72
COL17A1-205ENST00000480127 FMN2Q9NZ56 1722 aa10.56□□□□□ -0.72
COL17A1-205ENST00000480127 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
COL17A1-205ENST00000480127 VPS72Q15906 364 aa10.56□□□□□ -0.72
COL17A1-205ENST00000480127 SPATA31E1Q6ZUB1 1445 aa10.56□□□□□ -0.72
COL17A1-205ENST00000480127 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
COL17A1-205ENST00000480127 KIF1AQ12756 1690 aa10.55□□□□□ -0.72
COL17A1-205ENST00000480127 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
COL17A1-205ENST00000480127 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
COL17A1-205ENST00000480127 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
COL17A1-205ENST00000480127 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
COL17A1-205ENST00000480127 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
COL17A1-205ENST00000480127 TNS3Q68CZ2 1445 aa10.54□□□□□ -0.72
COL17A1-205ENST00000480127 SIRT1Q96EB6 747 aa10.54□□□□□ -0.72
COL17A1-205ENST00000480127 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
COL17A1-205ENST00000480127 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
COL17A1-205ENST00000480127 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
COL17A1-205ENST00000480127 KRT27Q7Z3Y8 459 aa10.53□□□□□ -0.72
COL17A1-205ENST00000480127 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
COL17A1-205ENST00000480127 LRP5O75197 1615 aa10.53□□□□□ -0.72
COL17A1-205ENST00000480127 SBNO1A3KN83 1393 aa10.52□□□□□ -0.72
COL17A1-205ENST00000480127 FAM83GA6ND36 823 aa10.52□□□□□ -0.73
COL17A1-205ENST00000480127 HAP1P54257 671 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-205ENST00000480127 PSME1Q06323 249 aa10.52□□□□□ -0.73
COL17A1-205ENST00000480127 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
COL17A1-205ENST00000480127 NWD2Q9ULI1 1742 aa10.52□□□□□ -0.73
COL17A1-205ENST00000480127 NRXN1Q9ULB1 1477 aa10.51□□□□□ -0.73
COL17A1-205ENST00000480127 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
COL17A1-205ENST00000480127 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
COL17A1-205ENST00000480127 ABCA3Q99758 1704 aa10.5□□□□□ -0.73
COL17A1-205ENST00000480127 RGPD8O14715 1765 aaPredicted RBP10.5□□□□□ -0.73
COL17A1-205ENST00000480127 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
COL17A1-205ENST00000480127 C14orf93Q9H972 538 aaKnown RBP10.5□□□□□ -0.73
COL17A1-205ENST00000480127 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
COL17A1-205ENST00000480127 HRCP23327 699 aa10.49□□□□□ -0.73
COL17A1-205ENST00000480127 BAG6P46379 1132 aa10.49□□□□□ -0.73
COL17A1-205ENST00000480127 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
COL17A1-205ENST00000480127 MPHOSPH9Q99550 1183 aa10.49□□□□□ -0.73
COL17A1-205ENST00000480127 NRAPQ86VF7 1730 aa10.48□□□□□ -0.73
COL17A1-205ENST00000480127 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
COL17A1-205ENST00000480127 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
COL17A1-205ENST00000480127 SAFB2Q14151 953 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL17A1-205ENST00000480127 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
COL17A1-205ENST00000480127 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
COL17A1-205ENST00000480127 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
COL17A1-205ENST00000480127 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
COL17A1-205ENST00000480127 A0A0G2JS52 829 aa10.46□□□□□ -0.73
COL17A1-205ENST00000480127 MYT1Q01538 1121 aa10.46□□□□□ -0.73
COL17A1-205ENST00000480127 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.73
COL17A1-205ENST00000480127 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.74
COL17A1-205ENST00000480127 TRPM3Q9HCF6 1732 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-205ENST00000480127 FAM182BQ5T319 152 aa10.45□□□□□ -0.74
COL17A1-205ENST00000480127 DLC1Q96QB1 1528 aa10.44□□□□□ -0.74
COL17A1-205ENST00000480127 DISP2A7MBM2 1401 aa10.44□□□□□ -0.74
COL17A1-205ENST00000480127 SPATA31A5Q5VU36 1347 aa10.44□□□□□ -0.74
COL17A1-205ENST00000480127 SPATA31A7Q8IWB4 1347 aa10.44□□□□□ -0.74
COL17A1-205ENST00000480127 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
COL17A1-205ENST00000480127 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
COL17A1-205ENST00000480127 ADGRB2O60241 1585 aa10.43□□□□□ -0.74
COL17A1-205ENST00000480127 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
COL17A1-205ENST00000480127 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
COL17A1-205ENST00000480127 R3HDM1Q15032 1099 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms