RNA–Protein interactions for RNA: ENST00000479992.5

RPL13A-209, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-209ENST00000479992 PRAM1Q96QH2 718 aa22.96■■□□□ 1.27
RPL13A-209ENST00000479992 MST1RQ04912 1400 aa22.96■■□□□ 1.27
RPL13A-209ENST00000479992 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
RPL13A-209ENST00000479992 NBPF1Q3BBV0 1214 aa22.95■■□□□ 1.26
RPL13A-209ENST00000479992 CDC42BPGQ6DT37 1551 aa22.95■■□□□ 1.26
RPL13A-209ENST00000479992 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
RPL13A-209ENST00000479992 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
RPL13A-209ENST00000479992 POGKQ9P215 609 aa22.93■■□□□ 1.26
RPL13A-209ENST00000479992 ARHGEF28Q8N1W1 1705 aaKnown RBP22.91■■□□□ 1.26
RPL13A-209ENST00000479992 NBPF8Q3BBV2 869 aa22.9■■□□□ 1.26
RPL13A-209ENST00000479992 C1orf167Q5SNV9 1468 aa22.88■■□□□ 1.25
RPL13A-209ENST00000479992 BRINP3Q76B58 766 aa22.88■■□□□ 1.25
RPL13A-209ENST00000479992 ROCK2O75116 1388 aaKnown RBP22.88■■□□□ 1.25
RPL13A-209ENST00000479992 MINK1Q8N4C8 1332 aaPredicted RBP22.85■■□□□ 1.25
RPL13A-209ENST00000479992 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
RPL13A-209ENST00000479992 TIMELESSQ9UNS1 1208 aa22.85■■□□□ 1.25
RPL13A-209ENST00000479992 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
RPL13A-209ENST00000479992 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
RPL13A-209ENST00000479992 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
RPL13A-209ENST00000479992 PHLPP1O60346 1717 aa22.83■■□□□ 1.25
RPL13A-209ENST00000479992 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
RPL13A-209ENST00000479992 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
RPL13A-209ENST00000479992 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
RPL13A-209ENST00000479992 ORAI2Q96SN7 254 aa22.81■■□□□ 1.24
RPL13A-209ENST00000479992 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
RPL13A-209ENST00000479992 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
RPL13A-209ENST00000479992 ESCO1Q5FWF5 840 aa22.78■■□□□ 1.24
RPL13A-209ENST00000479992 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
RPL13A-209ENST00000479992 CENPJQ9HC77 1338 aaPredicted RBP22.78■■□□□ 1.24
RPL13A-209ENST00000479992 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
RPL13A-209ENST00000479992 QRICH2Q9H0J4 1663 aa22.75■■□□□ 1.23
RPL13A-209ENST00000479992 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
RPL13A-209ENST00000479992 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
RPL13A-209ENST00000479992 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
RPL13A-209ENST00000479992 EIF3AQ14152 1382 aaKnown RBP22.74■■□□□ 1.23
RPL13A-209ENST00000479992 ANKARQ7Z5J8 1434 aa22.74■■□□□ 1.23
RPL13A-209ENST00000479992 KIF1AQ12756 1690 aa22.71■■□□□ 1.23
RPL13A-209ENST00000479992 PRR36Q9H6K5 1346 aa22.7■■□□□ 1.22
RPL13A-209ENST00000479992 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.22
RPL13A-209ENST00000479992 JCADQ9P266 1359 aa22.69■■□□□ 1.22
RPL13A-209ENST00000479992 ATP7BP35670 1465 aa22.68■■□□□ 1.22
RPL13A-209ENST00000479992 FOXO3O43524 673 aa22.68■■□□□ 1.22
RPL13A-209ENST00000479992 MED1Q15648 1581 aaPredicted RBP22.67■■□□□ 1.22
RPL13A-209ENST00000479992 NPHP3Q7Z494 1330 aa22.67■■□□□ 1.22
RPL13A-209ENST00000479992 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
RPL13A-209ENST00000479992 CDK19Q9BWU1 502 aa22.67■■□□□ 1.22
RPL13A-209ENST00000479992 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
RPL13A-209ENST00000479992 PXDNQ92626 1479 aa22.66■■□□□ 1.22
RPL13A-209ENST00000479992 SOS2Q07890 1332 aaPredicted RBP22.65■■□□□ 1.22
RPL13A-209ENST00000479992 PMFBP1Q8TBY8 1022 aa22.65■■□□□ 1.22
RPL13A-209ENST00000479992 SHPRHQ149N8 1683 aa22.64■■□□□ 1.21
RPL13A-209ENST00000479992 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
RPL13A-209ENST00000479992 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
RPL13A-209ENST00000479992 NUDT16Q96DE0 195 aaKnown RBP22.63■■□□□ 1.21
RPL13A-209ENST00000479992 ITSN1Q15811 1721 aa22.62■■□□□ 1.21
RPL13A-209ENST00000479992 TOPAZ1Q8N9V7 1692 aa22.62■■□□□ 1.21
RPL13A-209ENST00000479992 CABP2Q9NPB3 220 aa22.61■■□□□ 1.21
RPL13A-209ENST00000479992 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
RPL13A-209ENST00000479992 SBNO2Q9Y2G9 1366 aa22.61■■□□□ 1.21
RPL13A-209ENST00000479992 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
RPL13A-209ENST00000479992 USP47Q96K76 1375 aa22.59■■□□□ 1.21
RPL13A-209ENST00000479992 DISP3Q9P2K9 1392 aa22.59■■□□□ 1.21
RPL13A-209ENST00000479992 KRT28Q7Z3Y7 464 aa22.58■■□□□ 1.21
RPL13A-209ENST00000479992 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
RPL13A-209ENST00000479992 LRP6O75581 1613 aa22.57■■□□□ 1.2
RPL13A-209ENST00000479992 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
RPL13A-209ENST00000479992 PSME1Q06323 249 aa22.56■■□□□ 1.2
RPL13A-209ENST00000479992 NGDNQ8NEJ9 315 aaKnown RBP22.56■■□□□ 1.2
RPL13A-209ENST00000479992 CCDC61Q9Y6R9 512 aa22.56■■□□□ 1.2
RPL13A-209ENST00000479992 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
RPL13A-209ENST00000479992 NUTM2BA6NNL0 878 aaPredicted RBP22.54■■□□□ 1.2
RPL13A-209ENST00000479992 NUTM2EB1AL46 878 aaPredicted RBP22.54■■□□□ 1.2
RPL13A-209ENST00000479992 NUTM2AQ8IVF1 878 aaPredicted RBP22.54■■□□□ 1.2
RPL13A-209ENST00000479992 TESK2Q96S53 571 aa22.53■■□□□ 1.2
RPL13A-209ENST00000479992 TNS3Q68CZ2 1445 aa22.53■■□□□ 1.2
RPL13A-209ENST00000479992 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
RPL13A-209ENST00000479992 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
RPL13A-209ENST00000479992 COL22A1Q8NFW1 1626 aaPredicted RBP22.51■■□□□ 1.19
RPL13A-209ENST00000479992 ACEP12821 1306 aa22.51■■□□□ 1.19
RPL13A-209ENST00000479992 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
RPL13A-209ENST00000479992 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
RPL13A-209ENST00000479992 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
RPL13A-209ENST00000479992 PLEKHG3A1L390 1219 aa22.49■■□□□ 1.19
RPL13A-209ENST00000479992 MEX3CQ5U5Q3 659 aaKnown RBP22.49■■□□□ 1.19
RPL13A-209ENST00000479992 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
RPL13A-209ENST00000479992 CABP1Q9NZU7 370 aa22.49■■□□□ 1.19
RPL13A-209ENST00000479992 ATAD2Q6PL18 1390 aa22.49■■□□□ 1.19
RPL13A-209ENST00000479992 PAK3O75914 559 aaPredicted RBP22.46■■□□□ 1.19
RPL13A-209ENST00000479992 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
RPL13A-209ENST00000479992 ARHGEF10O15013 1369 aa22.46■■□□□ 1.19
RPL13A-209ENST00000479992 PUS7Q96PZ0 661 aaKnown RBP22.45■■□□□ 1.18
RPL13A-209ENST00000479992 ALS2Q96Q42 1657 aa22.45■■□□□ 1.18
RPL13A-209ENST00000479992 ADAMTS2O95450 1211 aa22.44■■□□□ 1.18
RPL13A-209ENST00000479992 SLC24A1O60721 1099 aa22.42■■□□□ 1.18
RPL13A-209ENST00000479992 USP6P35125 1406 aa22.4■■□□□ 1.18
RPL13A-209ENST00000479992 TMF1P82094 1093 aa22.4■■□□□ 1.18
RPL13A-209ENST00000479992 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
RPL13A-209ENST00000479992 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
RPL13A-209ENST00000479992 C8orf37Q96NL8 207 aa22.4■■□□□ 1.18
RPL13A-209ENST00000479992 ABCA3Q99758 1704 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms