RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 ROBO1Q9Y6N7 1651 aa27.08■■□□□ 1.92
AGRN-208ENST00000479707 DCCP43146 1447 aa27.07■■□□□ 1.92
AGRN-208ENST00000479707 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
AGRN-208ENST00000479707 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
AGRN-208ENST00000479707 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
AGRN-208ENST00000479707 MST1RQ04912 1400 aa27.03■■□□□ 1.92
AGRN-208ENST00000479707 NUTM2FA1L443 756 aa27.01■■□□□ 1.91
AGRN-208ENST00000479707 TRPM1Q7Z4N2 1603 aa27.01■■□□□ 1.91
AGRN-208ENST00000479707 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
AGRN-208ENST00000479707 BRINP3Q76B58 766 aa26.98■■□□□ 1.91
AGRN-208ENST00000479707 ARHGEF28Q8N1W1 1705 aaKnown RBP26.98■■□□□ 1.91
AGRN-208ENST00000479707 MINK1Q8N4C8 1332 aaPredicted RBP26.97■■□□□ 1.91
AGRN-208ENST00000479707 HIRIP3Q9BW71 556 aaPredicted RBP26.97■■□□□ 1.91
AGRN-208ENST00000479707 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
AGRN-208ENST00000479707 C1orf167Q5SNV9 1468 aa26.96■■□□□ 1.91
AGRN-208ENST00000479707 CDC42BPGQ6DT37 1551 aa26.96■■□□□ 1.91
AGRN-208ENST00000479707 ORAI2Q96SN7 254 aa26.94■■□□□ 1.9
AGRN-208ENST00000479707 PHLPP1O60346 1717 aa26.93■■□□□ 1.9
AGRN-208ENST00000479707 ESCO1Q5FWF5 840 aa26.91■■□□□ 1.9
AGRN-208ENST00000479707 DDX17Q92841 729 aaKnown RBP26.91■■□□□ 1.9
AGRN-208ENST00000479707 FMN2Q9NZ56 1722 aa26.9■■□□□ 1.9
AGRN-208ENST00000479707 CARD11Q9BXL7 1154 aa26.87■■□□□ 1.89
AGRN-208ENST00000479707 RGPD8O14715 1765 aaPredicted RBP26.86■■□□□ 1.89
AGRN-208ENST00000479707 CENPJQ9HC77 1338 aaPredicted RBP26.86■■□□□ 1.89
AGRN-208ENST00000479707 TIMELESSQ9UNS1 1208 aa26.85■■□□□ 1.89
AGRN-208ENST00000479707 ADGRB2O60241 1585 aa26.84■■□□□ 1.89
AGRN-208ENST00000479707 AHDC1Q5TGY3 1603 aaPredicted RBP26.84■■□□□ 1.89
AGRN-208ENST00000479707 WASLO00401 505 aaPredicted RBP26.84■■□□□ 1.89
AGRN-208ENST00000479707 RALGAPBQ86X10 1494 aa26.84■■□□□ 1.89
AGRN-208ENST00000479707 GPRASP1Q5JY77 1395 aa26.83■■□□□ 1.88
AGRN-208ENST00000479707 NHSL1Q5SYE7 1610 aa26.82■■□□□ 1.88
AGRN-208ENST00000479707 COL16A1Q07092 1604 aaPredicted RBP26.81■■□□□ 1.88
AGRN-208ENST00000479707 QRICH2Q9H0J4 1663 aa26.8■■□□□ 1.88
AGRN-208ENST00000479707 CDK19Q9BWU1 502 aa26.8■■□□□ 1.88
AGRN-208ENST00000479707 FOXO3O43524 673 aa26.79■■□□□ 1.88
AGRN-208ENST00000479707 USP32Q8NFA0 1604 aa26.78■■□□□ 1.88
AGRN-208ENST00000479707 PRR36Q9H6K5 1346 aa26.77■■□□□ 1.88
AGRN-208ENST00000479707 XPCQ01831 940 aaPredicted RBP26.77■■□□□ 1.88
AGRN-208ENST00000479707 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
AGRN-208ENST00000479707 PMFBP1Q8TBY8 1022 aa26.76■■□□□ 1.87
AGRN-208ENST00000479707 PHF8Q9UPP1 1060 aa26.76■■□□□ 1.87
AGRN-208ENST00000479707 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
AGRN-208ENST00000479707 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
AGRN-208ENST00000479707 JCADQ9P266 1359 aa26.74■■□□□ 1.87
AGRN-208ENST00000479707 NPHP3Q7Z494 1330 aa26.73■■□□□ 1.87
AGRN-208ENST00000479707 LRRC59Q96AG4 307 aaKnown RBP26.73■■□□□ 1.87
AGRN-208ENST00000479707 NUDT16Q96DE0 195 aaKnown RBP26.73■■□□□ 1.87
AGRN-208ENST00000479707 SRPK2P78362 688 aaKnown RBP26.72■■□□□ 1.87
AGRN-208ENST00000479707 KIF1AQ12756 1690 aa26.72■■□□□ 1.87
AGRN-208ENST00000479707 SOS2Q07890 1332 aaPredicted RBP26.71■■□□□ 1.87
AGRN-208ENST00000479707 CABP2Q9NPB3 220 aa26.71■■□□□ 1.87
AGRN-208ENST00000479707 KRT28Q7Z3Y7 464 aa26.68■■□□□ 1.86
AGRN-208ENST00000479707 PSME1Q06323 249 aa26.67■■□□□ 1.86
AGRN-208ENST00000479707 ATP7BP35670 1465 aa26.67■■□□□ 1.86
AGRN-208ENST00000479707 MED1Q15648 1581 aaPredicted RBP26.67■■□□□ 1.86
AGRN-208ENST00000479707 EVC2Q86UK5 1308 aa26.66■■□□□ 1.86
AGRN-208ENST00000479707 PXDNQ92626 1479 aa26.66■■□□□ 1.86
AGRN-208ENST00000479707 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
AGRN-208ENST00000479707 SHPRHQ149N8 1683 aa26.65■■□□□ 1.86
AGRN-208ENST00000479707 ITSN1Q15811 1721 aa26.65■■□□□ 1.86
AGRN-208ENST00000479707 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
AGRN-208ENST00000479707 ST20-MTHFSA0A0A6YYL1 179 aa26.64■■□□□ 1.86
AGRN-208ENST00000479707 NUTM2BA6NNL0 878 aaPredicted RBP26.64■■□□□ 1.86
AGRN-208ENST00000479707 NUTM2EB1AL46 878 aaPredicted RBP26.64■■□□□ 1.86
AGRN-208ENST00000479707 NUTM2AQ8IVF1 878 aaPredicted RBP26.64■■□□□ 1.86
AGRN-208ENST00000479707 CCDC61Q9Y6R9 512 aa26.64■■□□□ 1.86
AGRN-208ENST00000479707 PNPLA6Q8IY17 1366 aa26.62■■□□□ 1.85
AGRN-208ENST00000479707 SPATA31A6Q5VVP1 1343 aa26.61■■□□□ 1.85
AGRN-208ENST00000479707 USP47Q96K76 1375 aa26.6■■□□□ 1.85
AGRN-208ENST00000479707 TOPAZ1Q8N9V7 1692 aa26.59■■□□□ 1.85
AGRN-208ENST00000479707 LMOD2Q6P5Q4 547 aa26.58■■□□□ 1.85
AGRN-208ENST00000479707 PPIP5K1Q6PFW1 1433 aa26.57■■□□□ 1.84
AGRN-208ENST00000479707 PHF23Q9BUL5 403 aaPredicted RBP26.57■■□□□ 1.84
AGRN-208ENST00000479707 CABP1Q9NZU7 370 aa26.57■■□□□ 1.84
AGRN-208ENST00000479707 ACEP12821 1306 aa26.57■■□□□ 1.84
AGRN-208ENST00000479707 SPATA31A3Q5VYP0 1347 aa26.57■■□□□ 1.84
AGRN-208ENST00000479707 SBNO2Q9Y2G9 1366 aa26.57■■□□□ 1.84
AGRN-208ENST00000479707 PLEKHG3A1L390 1219 aa26.56■■□□□ 1.84
AGRN-208ENST00000479707 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
AGRN-208ENST00000479707 LRP6O75581 1613 aa26.56■■□□□ 1.84
AGRN-208ENST00000479707 MEX3CQ5U5Q3 659 aaKnown RBP26.55■■□□□ 1.84
AGRN-208ENST00000479707 TESK2Q96S53 571 aa26.55■■□□□ 1.84
AGRN-208ENST00000479707 PAK3O75914 559 aaPredicted RBP26.54■■□□□ 1.84
AGRN-208ENST00000479707 SBNO1A3KN83 1393 aa26.52■■□□□ 1.84
AGRN-208ENST00000479707 TNS3Q68CZ2 1445 aa26.51■■□□□ 1.83
AGRN-208ENST00000479707 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
AGRN-208ENST00000479707 POLR3AO14802 1390 aaPredicted RBP26.5■■□□□ 1.83
AGRN-208ENST00000479707 ADAMTS2O95450 1211 aa26.5■■□□□ 1.83
AGRN-208ENST00000479707 COL22A1Q8NFW1 1626 aaPredicted RBP26.49■■□□□ 1.83
AGRN-208ENST00000479707 ATAD2Q6PL18 1390 aa26.48■■□□□ 1.83
AGRN-208ENST00000479707 TMC1Q8TDI8 760 aa26.47■■□□□ 1.83
AGRN-208ENST00000479707 CABLES1Q8TDN4 633 aa26.47■■□□□ 1.83
AGRN-208ENST00000479707 SLC24A1O60721 1099 aa26.45■■□□□ 1.82
AGRN-208ENST00000479707 TMF1P82094 1093 aa26.45■■□□□ 1.82
AGRN-208ENST00000479707 ARHGEF10O15013 1369 aa26.45■■□□□ 1.82
AGRN-208ENST00000479707 HAP1P54257 671 aaPredicted RBP26.44■■□□□ 1.82
AGRN-208ENST00000479707 EIF4G2P78344 907 aaKnown RBP eCLIP26.44■■□□□ 1.82
AGRN-208ENST00000479707 C8orf37Q96NL8 207 aa26.44■■□□□ 1.82
AGRN-208ENST00000479707 RGS17Q9UGC6 210 aaPredicted RBP26.44■■□□□ 1.82
AGRN-208ENST00000479707 HSPA5P11021 654 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms