RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
DDX56-211ENST00000479602 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
DDX56-211ENST00000479602 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
DDX56-211ENST00000479602 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
DDX56-211ENST00000479602 TECPR2O15040 1411 aa13.06□□□□□ -0.32
DDX56-211ENST00000479602 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
DDX56-211ENST00000479602 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
DDX56-211ENST00000479602 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
DDX56-211ENST00000479602 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
DDX56-211ENST00000479602 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
DDX56-211ENST00000479602 NALCNQ8IZF0 1738 aa13.04□□□□□ -0.32
DDX56-211ENST00000479602 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
DDX56-211ENST00000479602 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
DDX56-211ENST00000479602 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
DDX56-211ENST00000479602 C14orf93Q9H972 538 aaKnown RBP13.03□□□□□ -0.32
DDX56-211ENST00000479602 MYOM2P54296 1465 aa13.03□□□□□ -0.32
DDX56-211ENST00000479602 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
DDX56-211ENST00000479602 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
DDX56-211ENST00000479602 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
DDX56-211ENST00000479602 PPLO60437 1756 aa13.01□□□□□ -0.33
DDX56-211ENST00000479602 PIK3C2GO75747 1445 aa13□□□□□ -0.33
DDX56-211ENST00000479602 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
DDX56-211ENST00000479602 NGLY1Q96IV0 654 aa13□□□□□ -0.33
DDX56-211ENST00000479602 PXDNQ92626 1479 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 FOXO3O43524 673 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
DDX56-211ENST00000479602 RGS12O14924 1447 aa12.98□□□□□ -0.33
DDX56-211ENST00000479602 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
DDX56-211ENST00000479602 STK26Q9P289 416 aa12.97□□□□□ -0.33
DDX56-211ENST00000479602 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
DDX56-211ENST00000479602 USP21Q9UK80 565 aa12.96□□□□□ -0.33
DDX56-211ENST00000479602 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
DDX56-211ENST00000479602 ATRNO75882 1429 aa12.96□□□□□ -0.34
DDX56-211ENST00000479602 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
DDX56-211ENST00000479602 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
DDX56-211ENST00000479602 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
DDX56-211ENST00000479602 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
DDX56-211ENST00000479602 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
DDX56-211ENST00000479602 EP400Q96L91 3159 aa12.94□□□□□ -0.34
DDX56-211ENST00000479602 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
DDX56-211ENST00000479602 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
DDX56-211ENST00000479602 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
DDX56-211ENST00000479602 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
DDX56-211ENST00000479602 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
DDX56-211ENST00000479602 SLIT2O94813 1529 aa12.9□□□□□ -0.34
DDX56-211ENST00000479602 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
DDX56-211ENST00000479602 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
DDX56-211ENST00000479602 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
DDX56-211ENST00000479602 PRAM1Q96QH2 718 aa12.88□□□□□ -0.35
DDX56-211ENST00000479602 ADGRB1O14514 1584 aa12.87□□□□□ -0.35
DDX56-211ENST00000479602 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
DDX56-211ENST00000479602 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
DDX56-211ENST00000479602 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
DDX56-211ENST00000479602 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
DDX56-211ENST00000479602 PSME1Q06323 249 aa12.86□□□□□ -0.35
DDX56-211ENST00000479602 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
DDX56-211ENST00000479602 GPRASP1Q5JY77 1395 aa12.85□□□□□ -0.35
DDX56-211ENST00000479602 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
DDX56-211ENST00000479602 VPS72Q15906 364 aa12.84□□□□□ -0.35
DDX56-211ENST00000479602 ANKARQ7Z5J8 1434 aa12.84□□□□□ -0.35
DDX56-211ENST00000479602 PRR36Q9H6K5 1346 aa12.84□□□□□ -0.35
DDX56-211ENST00000479602 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
DDX56-211ENST00000479602 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
DDX56-211ENST00000479602 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
DDX56-211ENST00000479602 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
DDX56-211ENST00000479602 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
DDX56-211ENST00000479602 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
DDX56-211ENST00000479602 SAFB2Q14151 953 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDX56-211ENST00000479602 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
DDX56-211ENST00000479602 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
DDX56-211ENST00000479602 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
DDX56-211ENST00000479602 GLI3P10071 1580 aa12.81□□□□□ -0.36
DDX56-211ENST00000479602 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
DDX56-211ENST00000479602 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
DDX56-211ENST00000479602 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
DDX56-211ENST00000479602 POGKQ9P215 609 aa12.8□□□□□ -0.36
DDX56-211ENST00000479602 ADGRB2O60241 1585 aa12.79□□□□□ -0.36
DDX56-211ENST00000479602 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
DDX56-211ENST00000479602 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
DDX56-211ENST00000479602 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
DDX56-211ENST00000479602 USP32Q8NFA0 1604 aa12.79□□□□□ -0.36
DDX56-211ENST00000479602 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
DDX56-211ENST00000479602 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
DDX56-211ENST00000479602 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
DDX56-211ENST00000479602 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.37
DDX56-211ENST00000479602 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
DDX56-211ENST00000479602 MINK1Q8N4C8 1332 aaPredicted RBP12.76□□□□□ -0.37
DDX56-211ENST00000479602 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
DDX56-211ENST00000479602 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
DDX56-211ENST00000479602 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
DDX56-211ENST00000479602 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
DDX56-211ENST00000479602 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
DDX56-211ENST00000479602 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
DDX56-211ENST00000479602 ARHGEF28Q8N1W1 1705 aaKnown RBP12.74□□□□□ -0.37
DDX56-211ENST00000479602 TULP4Q9NRJ4 1543 aa12.73□□□□□ -0.37
DDX56-211ENST00000479602 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms