RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
HDLBP-237ENST00000479169 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
HDLBP-237ENST00000479169 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
HDLBP-237ENST00000479169 MYOM2P54296 1465 aa16.64■□□□□ 0.25
HDLBP-237ENST00000479169 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
HDLBP-237ENST00000479169 ATRNO75882 1429 aa16.63■□□□□ 0.25
HDLBP-237ENST00000479169 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
HDLBP-237ENST00000479169 PXDNQ92626 1479 aa16.62■□□□□ 0.25
HDLBP-237ENST00000479169 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
HDLBP-237ENST00000479169 FOXD1Q16676 465 aa16.62■□□□□ 0.25
HDLBP-237ENST00000479169 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
HDLBP-237ENST00000479169 FNBP4Q8N3X1 1017 aaPredicted RBP16.62■□□□□ 0.25
HDLBP-237ENST00000479169 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
HDLBP-237ENST00000479169 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
HDLBP-237ENST00000479169 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
HDLBP-237ENST00000479169 STK26Q9P289 416 aa16.6■□□□□ 0.25
HDLBP-237ENST00000479169 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
HDLBP-237ENST00000479169 FOXO3O43524 673 aa16.59■□□□□ 0.25
HDLBP-237ENST00000479169 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
HDLBP-237ENST00000479169 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
HDLBP-237ENST00000479169 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
HDLBP-237ENST00000479169 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
HDLBP-237ENST00000479169 PLEKHH1Q9ULM0 1364 aa16.57■□□□□ 0.24
HDLBP-237ENST00000479169 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
HDLBP-237ENST00000479169 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
HDLBP-237ENST00000479169 TECPR2O15040 1411 aa16.56■□□□□ 0.24
HDLBP-237ENST00000479169 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
HDLBP-237ENST00000479169 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
HDLBP-237ENST00000479169 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
HDLBP-237ENST00000479169 LRPPRCP42704 1394 aaKnown RBP16.55■□□□□ 0.24
HDLBP-237ENST00000479169 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
HDLBP-237ENST00000479169 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
HDLBP-237ENST00000479169 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
HDLBP-237ENST00000479169 GLI3P10071 1580 aa16.53■□□□□ 0.24
HDLBP-237ENST00000479169 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.24
HDLBP-237ENST00000479169 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
HDLBP-237ENST00000479169 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
HDLBP-237ENST00000479169 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
HDLBP-237ENST00000479169 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
HDLBP-237ENST00000479169 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
HDLBP-237ENST00000479169 RALGAPBQ86X10 1494 aa16.5■□□□□ 0.23
HDLBP-237ENST00000479169 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
HDLBP-237ENST00000479169 YTHDC2Q9H6S0 1430 aaKnown RBP16.5■□□□□ 0.23
HDLBP-237ENST00000479169 SLIT2O94813 1529 aa16.5■□□□□ 0.23
HDLBP-237ENST00000479169 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
HDLBP-237ENST00000479169 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
HDLBP-237ENST00000479169 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
HDLBP-237ENST00000479169 PLCH1Q4KWH8 1693 aa16.47■□□□□ 0.23
HDLBP-237ENST00000479169 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
HDLBP-237ENST00000479169 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
HDLBP-237ENST00000479169 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
HDLBP-237ENST00000479169 CCDC125Q86Z20 511 aa16.45■□□□□ 0.22
HDLBP-237ENST00000479169 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
HDLBP-237ENST00000479169 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
HDLBP-237ENST00000479169 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
HDLBP-237ENST00000479169 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDLBP-237ENST00000479169 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-237ENST00000479169 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-237ENST00000479169 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
HDLBP-237ENST00000479169 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
HDLBP-237ENST00000479169 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
HDLBP-237ENST00000479169 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
HDLBP-237ENST00000479169 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
HDLBP-237ENST00000479169 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
HDLBP-237ENST00000479169 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
HDLBP-237ENST00000479169 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
HDLBP-237ENST00000479169 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
HDLBP-237ENST00000479169 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
HDLBP-237ENST00000479169 PSME1Q06323 249 aa16.39■□□□□ 0.21
HDLBP-237ENST00000479169 VPS72Q15906 364 aa16.39■□□□□ 0.21
HDLBP-237ENST00000479169 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
HDLBP-237ENST00000479169 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
HDLBP-237ENST00000479169 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-237ENST00000479169 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
HDLBP-237ENST00000479169 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
HDLBP-237ENST00000479169 DLC1Q96QB1 1528 aa16.36■□□□□ 0.21
HDLBP-237ENST00000479169 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
HDLBP-237ENST00000479169 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
HDLBP-237ENST00000479169 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
HDLBP-237ENST00000479169 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
HDLBP-237ENST00000479169 SF3B2Q13435 895 aaKnown RBP16.34■□□□□ 0.21
HDLBP-237ENST00000479169 KRT27Q7Z3Y8 459 aa16.34■□□□□ 0.21
HDLBP-237ENST00000479169 POGKQ9P215 609 aa16.34■□□□□ 0.21
HDLBP-237ENST00000479169 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
HDLBP-237ENST00000479169 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-237ENST00000479169 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-237ENST00000479169 A0A0G2JS52 829 aa16.32■□□□□ 0.2
HDLBP-237ENST00000479169 MYT1Q01538 1121 aa16.32■□□□□ 0.2
HDLBP-237ENST00000479169 COL14A1Q05707 1796 aaKnown RBP16.32■□□□□ 0.2
HDLBP-237ENST00000479169 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
HDLBP-237ENST00000479169 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-237ENST00000479169 PRR36Q9H6K5 1346 aa16.31■□□□□ 0.2
HDLBP-237ENST00000479169 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
HDLBP-237ENST00000479169 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
HDLBP-237ENST00000479169 LRP5O75197 1615 aa16.3■□□□□ 0.2
HDLBP-237ENST00000479169 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
HDLBP-237ENST00000479169 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
HDLBP-237ENST00000479169 RGPD1P0DJD0 1748 aa16.28■□□□□ 0.2
HDLBP-237ENST00000479169 ACIN1Q9UKV3 1341 aaKnown RBP16.28■□□□□ 0.2
HDLBP-237ENST00000479169 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms