RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
RC3H1-204ENST00000479099 NLRP7Q8WX94 980 aa9.1□□□□□ -0.95
RC3H1-204ENST00000479099 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
RC3H1-204ENST00000479099 S1PR4O95977 384 aa9.09□□□□□ -0.95
RC3H1-204ENST00000479099 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
RC3H1-204ENST00000479099 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
RC3H1-204ENST00000479099 A6NJR5 290 aa9.08□□□□□ -0.96
RC3H1-204ENST00000479099 FOXD4L5Q5VV16 416 aaPredicted RBP9.08□□□□□ -0.96
RC3H1-204ENST00000479099 FOXD4L4Q8WXT5 416 aaPredicted RBP9.08□□□□□ -0.96
RC3H1-204ENST00000479099 ZNF428Q96B54 188 aa9.08□□□□□ -0.96
RC3H1-204ENST00000479099 TRAK2O60296 914 aa9.07□□□□□ -0.96
RC3H1-204ENST00000479099 SLC19A1P41440 591 aa9.07□□□□□ -0.96
RC3H1-204ENST00000479099 MAP2K5Q13163 448 aa9.07□□□□□ -0.96
RC3H1-204ENST00000479099 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
RC3H1-204ENST00000479099 PPEF1O14829 653 aaPredicted RBP9.06□□□□□ -0.96
RC3H1-204ENST00000479099 GCGRP47871 477 aa9.06□□□□□ -0.96
RC3H1-204ENST00000479099 MORN1Q5T089 497 aa9.06□□□□□ -0.96
RC3H1-204ENST00000479099 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
RC3H1-204ENST00000479099 E9PSI1 815 aa9.05□□□□□ -0.96
RC3H1-204ENST00000479099 ATP6V1AP38606 617 aa9.05□□□□□ -0.96
RC3H1-204ENST00000479099 FUT2Q10981 343 aa9.05□□□□□ -0.96
RC3H1-204ENST00000479099 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
RC3H1-204ENST00000479099 SPSB2Q99619 263 aa9.05□□□□□ -0.96
RC3H1-204ENST00000479099 TRAF7Q6Q0C0 670 aa9.04□□□□□ -0.96
RC3H1-204ENST00000479099 GZF1Q9H116 711 aaPredicted RBP9.04□□□□□ -0.96
RC3H1-204ENST00000479099 SPRYD7Q5W111 196 aa9.03□□□□□ -0.96
RC3H1-204ENST00000479099 MINK1Q8N4C8 1332 aaPredicted RBP9.03□□□□□ -0.96
RC3H1-204ENST00000479099 LCE2BO14633 110 aa9.02□□□□□ -0.97
RC3H1-204ENST00000479099 IRF6O14896 467 aa9.02□□□□□ -0.97
RC3H1-204ENST00000479099 ZNF598Q86UK7 904 aaKnown RBP9.02□□□□□ -0.97
RC3H1-204ENST00000479099 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
RC3H1-204ENST00000479099 LIAT1Q6ZQX7 453 aa9.01□□□□□ -0.97
RC3H1-204ENST00000479099 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
RC3H1-204ENST00000479099 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
RC3H1-204ENST00000479099 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
RC3H1-204ENST00000479099 SLC27A5Q9Y2P5 690 aa9□□□□□ -0.97
RC3H1-204ENST00000479099 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
RC3H1-204ENST00000479099 CD46P15529 392 aa8.99□□□□□ -0.97
RC3H1-204ENST00000479099 PRR20EP86478 221 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PRR20CP86479 221 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PRR20DP86480 221 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PRR20BP86481 221 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PRR20AP86496 221 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
RC3H1-204ENST00000479099 PDE4DQ08499 809 aa8.97□□□□□ -0.97
RC3H1-204ENST00000479099 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
RC3H1-204ENST00000479099 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
RC3H1-204ENST00000479099 TRIM66O15016 1216 aa8.96□□□□□ -0.98
RC3H1-204ENST00000479099 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
RC3H1-204ENST00000479099 FAM160A2Q8N612 972 aaPredicted RBP8.96□□□□□ -0.98
RC3H1-204ENST00000479099 MSS51Q4VC12 460 aa8.95□□□□□ -0.98
RC3H1-204ENST00000479099 SERPINA10Q9UK55 444 aa8.95□□□□□ -0.98
RC3H1-204ENST00000479099 KDM4AO75164 1064 aa8.94□□□□□ -0.98
RC3H1-204ENST00000479099 Q3C1V9 767 aa8.94□□□□□ -0.98
RC3H1-204ENST00000479099 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
RC3H1-204ENST00000479099 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
RC3H1-204ENST00000479099 GDF9O60383 454 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 RPIAP49247 311 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 USP46P62068 366 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
RC3H1-204ENST00000479099 RETREG2Q8NC44 543 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 GPCPD1Q9NPB8 672 aa8.93□□□□□ -0.98
RC3H1-204ENST00000479099 CLCN1P35523 988 aa8.92□□□□□ -0.98
RC3H1-204ENST00000479099 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
RC3H1-204ENST00000479099 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
RC3H1-204ENST00000479099 PRDM9Q9NQV7 894 aa8.92□□□□□ -0.98
RC3H1-204ENST00000479099 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
RC3H1-204ENST00000479099 TNFRSF10AO00220 468 aa8.91□□□□□ -0.98
RC3H1-204ENST00000479099 DGAT1O75907 488 aa8.91□□□□□ -0.98
RC3H1-204ENST00000479099 IRF5Q13568 498 aa8.91□□□□□ -0.98
RC3H1-204ENST00000479099 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
RC3H1-204ENST00000479099 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
RC3H1-204ENST00000479099 CD2BP2O95400 341 aaKnown RBP8.89□□□□□ -0.99
RC3H1-204ENST00000479099 DDRGK1Q96HY6 314 aa8.89□□□□□ -0.99
RC3H1-204ENST00000479099 HOXA2O43364 376 aa8.88□□□□□ -0.99
RC3H1-204ENST00000479099 PKD2L1Q9P0L9 805 aa8.88□□□□□ -0.99
RC3H1-204ENST00000479099 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
RC3H1-204ENST00000479099 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
RC3H1-204ENST00000479099 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
RC3H1-204ENST00000479099 MMP16P51512 607 aa8.87□□□□□ -0.99
RC3H1-204ENST00000479099 FAM177A1Q8N128 213 aaPredicted RBP8.87□□□□□ -0.99
RC3H1-204ENST00000479099 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
RC3H1-204ENST00000479099 PATL2C9JE40 543 aaKnown RBP8.86□□□□□ -0.99
RC3H1-204ENST00000479099 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
RC3H1-204ENST00000479099 BRD2P25440 801 aaKnown RBP8.86□□□□□ -0.99
RC3H1-204ENST00000479099 FOXC1Q12948 553 aa8.86□□□□□ -0.99
RC3H1-204ENST00000479099 HLA-CQ95604 372 aa8.86□□□□□ -0.99
RC3H1-204ENST00000479099 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
RC3H1-204ENST00000479099 PROSER2Q86WR7 435 aaPredicted RBP8.85□□□□□ -0.99
RC3H1-204ENST00000479099 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
RC3H1-204ENST00000479099 DXOO77932 396 aaKnown RBP8.84□□□□□ -0.99
RC3H1-204ENST00000479099 NUTM1Q86Y26 1132 aa8.84□□□□□ -0.99
RC3H1-204ENST00000479099 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
RC3H1-204ENST00000479099 REPIN1Q9BWE0 567 aaKnown RBP8.83□□□□□ -1
RC3H1-204ENST00000479099 GUCA2AQ02747 115 aa8.82□□□□□ -1
RC3H1-204ENST00000479099 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
RC3H1-204ENST00000479099 MCM6Q14566 821 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms