RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
RN7SL549P-201ENST00000478997 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
RN7SL549P-201ENST00000478997 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 STK26Q9P289 416 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
RN7SL549P-201ENST00000478997 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 WAPLQ7Z5K2 1190 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 LRP6O75581 1613 aa11.15□□□□□ -0.62
RN7SL549P-201ENST00000478997 SOS2Q07890 1332 aaPredicted RBP11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 SOCS7O14512 581 aa11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
RN7SL549P-201ENST00000478997 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
RN7SL549P-201ENST00000478997 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
RN7SL549P-201ENST00000478997 PXDNQ92626 1479 aa11.12□□□□□ -0.63
RN7SL549P-201ENST00000478997 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 PRAM1Q96QH2 718 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
RN7SL549P-201ENST00000478997 ANKARQ7Z5J8 1434 aa11.1□□□□□ -0.63
RN7SL549P-201ENST00000478997 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
RN7SL549P-201ENST00000478997 ESCO1Q5FWF5 840 aa11.09□□□□□ -0.63
RN7SL549P-201ENST00000478997 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
RN7SL549P-201ENST00000478997 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 POGKQ9P215 609 aa11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
RN7SL549P-201ENST00000478997 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 FOXO3O43524 673 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
RN7SL549P-201ENST00000478997 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
RN7SL549P-201ENST00000478997 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 ATP7BP35670 1465 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
RN7SL549P-201ENST00000478997 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.64
RN7SL549P-201ENST00000478997 TOPAZ1Q8N9V7 1692 aa11.02□□□□□ -0.64
RN7SL549P-201ENST00000478997 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
RN7SL549P-201ENST00000478997 NBPF1Q3BBV0 1214 aa11.02□□□□□ -0.65
RN7SL549P-201ENST00000478997 TRPM3Q9HCF6 1732 aaPredicted RBP11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 HIRIP3Q9BW71 556 aaPredicted RBP11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 AFF2P51816 1311 aa11.01□□□□□ -0.65
RN7SL549P-201ENST00000478997 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
RN7SL549P-201ENST00000478997 PSME1Q06323 249 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ALS2Q96Q42 1657 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ABCA3Q99758 1704 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 ARHGEF10O15013 1369 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
RN7SL549P-201ENST00000478997 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 CENPJQ9HC77 1338 aaPredicted RBP10.99□□□□□ -0.65
RN7SL549P-201ENST00000478997 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 ADAMTS2O95450 1211 aa10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
RN7SL549P-201ENST00000478997 PMFBP1Q8TBY8 1022 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
RN7SL549P-201ENST00000478997 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 SLIT2O94813 1529 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 ATRNO75882 1429 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 RXRBP28702 533 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 CDK19Q9BWU1 502 aa10.96□□□□□ -0.65
RN7SL549P-201ENST00000478997 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
RN7SL549P-201ENST00000478997 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 USP21Q9UK80 565 aa10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
RN7SL549P-201ENST00000478997 RGS12O14924 1447 aa10.93□□□□□ -0.66
RN7SL549P-201ENST00000478997 BRD4O60885 1362 aaPredicted RBP10.93□□□□□ -0.66
RN7SL549P-201ENST00000478997 PLCH1Q4KWH8 1693 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms