RNA–Protein interactions for RNA: ENST00000478405.1

SPIN3-203, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 1,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-203ENST00000478405 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
SPIN3-203ENST00000478405 SLAIN2Q9P270 581 aa24.92■■□□□ 1.58
SPIN3-203ENST00000478405 XIRP1Q702N8 1843 aaKnown RBP24.92■■□□□ 1.58
SPIN3-203ENST00000478405 RALGAPBQ86X10 1494 aa24.92■■□□□ 1.58
SPIN3-203ENST00000478405 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
SPIN3-203ENST00000478405 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
SPIN3-203ENST00000478405 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
SPIN3-203ENST00000478405 KNDC1Q76NI1 1749 aa24.88■■□□□ 1.57
SPIN3-203ENST00000478405 CENPJQ9HC77 1338 aaPredicted RBP24.87■■□□□ 1.57
SPIN3-203ENST00000478405 DCCP43146 1447 aa24.87■■□□□ 1.57
SPIN3-203ENST00000478405 NUTM2FA1L443 756 aa24.84■■□□□ 1.57
SPIN3-203ENST00000478405 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.83■■□□□ 1.57
SPIN3-203ENST00000478405 EIF3AQ14152 1382 aaKnown RBP24.82■■□□□ 1.56
SPIN3-203ENST00000478405 WASLO00401 505 aaPredicted RBP24.81■■□□□ 1.56
SPIN3-203ENST00000478405 ILDR1Q86SU0 546 aaPredicted RBP24.81■■□□□ 1.56
SPIN3-203ENST00000478405 NALCNQ8IZF0 1738 aa24.8■■□□□ 1.56
SPIN3-203ENST00000478405 MST1RQ04912 1400 aa24.8■■□□□ 1.56
SPIN3-203ENST00000478405 ST20-MTHFSA0A0A6YYL1 179 aa24.79■■□□□ 1.56
SPIN3-203ENST00000478405 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
SPIN3-203ENST00000478405 CDK19Q9BWU1 502 aa24.78■■□□□ 1.56
SPIN3-203ENST00000478405 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
SPIN3-203ENST00000478405 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
SPIN3-203ENST00000478405 C1orf167Q5SNV9 1468 aa24.76■■□□□ 1.55
SPIN3-203ENST00000478405 ESCO1Q5FWF5 840 aa24.75■■□□□ 1.55
SPIN3-203ENST00000478405 USP47Q96K76 1375 aa24.74■■□□□ 1.55
SPIN3-203ENST00000478405 CDC42BPGQ6DT37 1551 aa24.74■■□□□ 1.55
SPIN3-203ENST00000478405 SRPK2P78362 688 aaKnown RBP24.72■■□□□ 1.55
SPIN3-203ENST00000478405 EVC2Q86UK5 1308 aa24.71■■□□□ 1.55
SPIN3-203ENST00000478405 CABP2Q9NPB3 220 aa24.71■■□□□ 1.55
SPIN3-203ENST00000478405 HSPA1LP34931 641 aa24.7■■□□□ 1.54
SPIN3-203ENST00000478405 NUDT16Q96DE0 195 aaKnown RBP24.7■■□□□ 1.54
SPIN3-203ENST00000478405 TESK2Q96S53 571 aa24.7■■□□□ 1.54
SPIN3-203ENST00000478405 EIF4G2P78344 907 aaKnown RBP eCLIP24.69■■□□□ 1.54
SPIN3-203ENST00000478405 PRR36Q9H6K5 1346 aa24.69■■□□□ 1.54
SPIN3-203ENST00000478405 ADGRB2O60241 1585 aa24.68■■□□□ 1.54
SPIN3-203ENST00000478405 SBNO2Q9Y2G9 1366 aa24.67■■□□□ 1.54
SPIN3-203ENST00000478405 DDX17Q92841 729 aaKnown RBP24.67■■□□□ 1.54
SPIN3-203ENST00000478405 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
SPIN3-203ENST00000478405 PHF8Q9UPP1 1060 aa24.66■■□□□ 1.54
SPIN3-203ENST00000478405 FOXO3O43524 673 aa24.65■■□□□ 1.54
SPIN3-203ENST00000478405 HSPA5P11021 654 aaKnown RBP24.65■■□□□ 1.54
SPIN3-203ENST00000478405 PMFBP1Q8TBY8 1022 aa24.65■■□□□ 1.54
SPIN3-203ENST00000478405 CCDC61Q9Y6R9 512 aa24.65■■□□□ 1.54
SPIN3-203ENST00000478405 ANKARQ7Z5J8 1434 aa24.65■■□□□ 1.54
SPIN3-203ENST00000478405 ROBO1Q9Y6N7 1651 aa24.64■■□□□ 1.54
SPIN3-203ENST00000478405 QRICH2Q9H0J4 1663 aa24.63■■□□□ 1.53
SPIN3-203ENST00000478405 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
SPIN3-203ENST00000478405 FMN2Q9NZ56 1722 aa24.62■■□□□ 1.53
SPIN3-203ENST00000478405 TMF1P82094 1093 aa24.61■■□□□ 1.53
SPIN3-203ENST00000478405 ZEB1P37275 1124 aaPredicted RBP24.6■■□□□ 1.53
SPIN3-203ENST00000478405 NPHP3Q7Z494 1330 aa24.59■■□□□ 1.53
SPIN3-203ENST00000478405 NGDNQ8NEJ9 315 aaKnown RBP24.58■■□□□ 1.53
SPIN3-203ENST00000478405 CABP1Q9NZU7 370 aa24.58■■□□□ 1.53
SPIN3-203ENST00000478405 ATP7BP35670 1465 aa24.58■■□□□ 1.53
SPIN3-203ENST00000478405 PLEKHG3A1L390 1219 aa24.57■■□□□ 1.52
SPIN3-203ENST00000478405 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
SPIN3-203ENST00000478405 PSME1Q06323 249 aa24.57■■□□□ 1.52
SPIN3-203ENST00000478405 PUS7Q96PZ0 661 aaKnown RBP24.57■■□□□ 1.52
SPIN3-203ENST00000478405 USP32Q8NFA0 1604 aa24.56■■□□□ 1.52
SPIN3-203ENST00000478405 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
SPIN3-203ENST00000478405 SOS2Q07890 1332 aaPredicted RBP24.55■■□□□ 1.52
SPIN3-203ENST00000478405 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
SPIN3-203ENST00000478405 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
SPIN3-203ENST00000478405 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
SPIN3-203ENST00000478405 ACEP12821 1306 aa24.53■■□□□ 1.52
SPIN3-203ENST00000478405 PPIP5K1Q6PFW1 1433 aa24.53■■□□□ 1.52
SPIN3-203ENST00000478405 CDCA8Q53HL2 280 aa24.52■■□□□ 1.52
SPIN3-203ENST00000478405 TMC1Q8TDI8 760 aa24.51■■□□□ 1.51
SPIN3-203ENST00000478405 AHDC1Q5TGY3 1603 aaPredicted RBP24.51■■□□□ 1.51
SPIN3-203ENST00000478405 SLC12A5Q9H2X9 1139 aa24.5■■□□□ 1.51
SPIN3-203ENST00000478405 RGPD8O14715 1765 aaPredicted RBP24.49■■□□□ 1.51
SPIN3-203ENST00000478405 POLR3AO14802 1390 aaPredicted RBP24.47■■□□□ 1.51
SPIN3-203ENST00000478405 PXDNQ92626 1479 aa24.46■■□□□ 1.51
SPIN3-203ENST00000478405 C11orf95C9JLR9 678 aaPredicted RBP24.46■■□□□ 1.51
SPIN3-203ENST00000478405 PHLPP1O60346 1717 aa24.46■■□□□ 1.51
SPIN3-203ENST00000478405 POLR3GLQ9BT43 218 aa24.45■■□□□ 1.5
SPIN3-203ENST00000478405 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
SPIN3-203ENST00000478405 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
SPIN3-203ENST00000478405 JCADQ9P266 1359 aa24.45■■□□□ 1.5
SPIN3-203ENST00000478405 KIF1AQ12756 1690 aa24.45■■□□□ 1.5
SPIN3-203ENST00000478405 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
SPIN3-203ENST00000478405 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
SPIN3-203ENST00000478405 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
SPIN3-203ENST00000478405 LMOD2Q6P5Q4 547 aa24.43■■□□□ 1.5
SPIN3-203ENST00000478405 SBNO1A3KN83 1393 aa24.41■■□□□ 1.5
SPIN3-203ENST00000478405 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
SPIN3-203ENST00000478405 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.5
SPIN3-203ENST00000478405 TOPAZ1Q8N9V7 1692 aa24.39■■□□□ 1.5
SPIN3-203ENST00000478405 ITSN1Q15811 1721 aa24.38■■□□□ 1.49
SPIN3-203ENST00000478405 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
SPIN3-203ENST00000478405 NINLQ9Y2I6 1382 aa24.38■■□□□ 1.49
SPIN3-203ENST00000478405 CPSF1Q10570 1443 aaKnown RBP24.37■■□□□ 1.49
SPIN3-203ENST00000478405 KTN1Q86UP2 1357 aaKnown RBP24.37■■□□□ 1.49
SPIN3-203ENST00000478405 USP6P35125 1406 aa24.35■■□□□ 1.49
SPIN3-203ENST00000478405 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
SPIN3-203ENST00000478405 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
SPIN3-203ENST00000478405 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
SPIN3-203ENST00000478405 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
SPIN3-203ENST00000478405 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
SPIN3-203ENST00000478405 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms