RNA–Protein interactions for RNA: ENST00000478375.5

TFAP2A-212, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,349 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-212ENST00000478375 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
TFAP2A-212ENST00000478375 NEUROD1Q13562 356 aa23.76■■□□□ 1.39
TFAP2A-212ENST00000478375 NUTM2FA1L443 756 aa23.73■■□□□ 1.39
TFAP2A-212ENST00000478375 DDX17Q92841 729 aaKnown RBP23.73■■□□□ 1.39
TFAP2A-212ENST00000478375 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
TFAP2A-212ENST00000478375 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
TFAP2A-212ENST00000478375 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
TFAP2A-212ENST00000478375 STAC3Q96MF2 364 aa23.71■■□□□ 1.39
TFAP2A-212ENST00000478375 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
TFAP2A-212ENST00000478375 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
TFAP2A-212ENST00000478375 ARHGEF28Q8N1W1 1705 aaKnown RBP23.71■■□□□ 1.39
TFAP2A-212ENST00000478375 POGKQ9P215 609 aa23.7■■□□□ 1.38
TFAP2A-212ENST00000478375 JCADQ9P266 1359 aa23.7■■□□□ 1.38
TFAP2A-212ENST00000478375 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.38
TFAP2A-212ENST00000478375 ORAI2Q96SN7 254 aa23.69■■□□□ 1.38
TFAP2A-212ENST00000478375 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TFAP2A-212ENST00000478375 RGPD8O14715 1765 aaPredicted RBP23.68■■□□□ 1.38
TFAP2A-212ENST00000478375 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
TFAP2A-212ENST00000478375 ESCO1Q5FWF5 840 aa23.65■■□□□ 1.38
TFAP2A-212ENST00000478375 ILDR2Q71H61 639 aa23.64■■□□□ 1.38
TFAP2A-212ENST00000478375 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
TFAP2A-212ENST00000478375 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
TFAP2A-212ENST00000478375 MINK1Q8N4C8 1332 aaPredicted RBP23.63■■□□□ 1.37
TFAP2A-212ENST00000478375 ADGRB2O60241 1585 aa23.62■■□□□ 1.37
TFAP2A-212ENST00000478375 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
TFAP2A-212ENST00000478375 LRP6O75581 1613 aa23.6■■□□□ 1.37
TFAP2A-212ENST00000478375 KIF1AQ12756 1690 aa23.6■■□□□ 1.37
TFAP2A-212ENST00000478375 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
TFAP2A-212ENST00000478375 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-212ENST00000478375 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-212ENST00000478375 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-212ENST00000478375 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-212ENST00000478375 USP32Q8NFA0 1604 aa23.58■■□□□ 1.37
TFAP2A-212ENST00000478375 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.36
TFAP2A-212ENST00000478375 MEX3CQ5U5Q3 659 aaKnown RBP23.56■■□□□ 1.36
TFAP2A-212ENST00000478375 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
TFAP2A-212ENST00000478375 LRRC59Q96AG4 307 aaKnown RBP23.56■■□□□ 1.36
TFAP2A-212ENST00000478375 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
TFAP2A-212ENST00000478375 NPHP3Q7Z494 1330 aa23.55■■□□□ 1.36
TFAP2A-212ENST00000478375 FOXO3O43524 673 aa23.55■■□□□ 1.36
TFAP2A-212ENST00000478375 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
TFAP2A-212ENST00000478375 PXDNQ92626 1479 aa23.53■■□□□ 1.36
TFAP2A-212ENST00000478375 SOS2Q07890 1332 aaPredicted RBP23.53■■□□□ 1.36
TFAP2A-212ENST00000478375 QRICH2Q9H0J4 1663 aa23.53■■□□□ 1.36
TFAP2A-212ENST00000478375 TULP4Q9NRJ4 1543 aa23.51■■□□□ 1.35
TFAP2A-212ENST00000478375 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
TFAP2A-212ENST00000478375 PHF8Q9UPP1 1060 aa23.5■■□□□ 1.35
TFAP2A-212ENST00000478375 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
TFAP2A-212ENST00000478375 RGS17Q9UGC6 210 aaPredicted RBP23.49■■□□□ 1.35
TFAP2A-212ENST00000478375 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
TFAP2A-212ENST00000478375 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
TFAP2A-212ENST00000478375 PMFBP1Q8TBY8 1022 aa23.48■■□□□ 1.35
TFAP2A-212ENST00000478375 EIF3AQ14152 1382 aaKnown RBP23.48■■□□□ 1.35
TFAP2A-212ENST00000478375 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
TFAP2A-212ENST00000478375 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
TFAP2A-212ENST00000478375 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
TFAP2A-212ENST00000478375 CENPJQ9HC77 1338 aaPredicted RBP23.45■■□□□ 1.34
TFAP2A-212ENST00000478375 ATP7BP35670 1465 aa23.43■■□□□ 1.34
TFAP2A-212ENST00000478375 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
TFAP2A-212ENST00000478375 KRT28Q7Z3Y7 464 aa23.43■■□□□ 1.34
TFAP2A-212ENST00000478375 ADAMTS2O95450 1211 aa23.42■■□□□ 1.34
TFAP2A-212ENST00000478375 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
TFAP2A-212ENST00000478375 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
TFAP2A-212ENST00000478375 TOPAZ1Q8N9V7 1692 aa23.41■■□□□ 1.34
TFAP2A-212ENST00000478375 POTEAQ6S8J7 498 aa23.4■■□□□ 1.34
TFAP2A-212ENST00000478375 PSME1Q06323 249 aa23.39■■□□□ 1.34
TFAP2A-212ENST00000478375 TNS3Q68CZ2 1445 aa23.39■■□□□ 1.34
TFAP2A-212ENST00000478375 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.34
TFAP2A-212ENST00000478375 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
TFAP2A-212ENST00000478375 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
TFAP2A-212ENST00000478375 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
TFAP2A-212ENST00000478375 MARF1Q9Y4F3 1742 aaKnown RBP23.38■■□□□ 1.33
TFAP2A-212ENST00000478375 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
TFAP2A-212ENST00000478375 AFF2P51816 1311 aa23.37■■□□□ 1.33
TFAP2A-212ENST00000478375 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
TFAP2A-212ENST00000478375 NGDNQ8NEJ9 315 aaKnown RBP23.36■■□□□ 1.33
TFAP2A-212ENST00000478375 GPRASP1Q5JY77 1395 aa23.35■■□□□ 1.33
TFAP2A-212ENST00000478375 ABCA3Q99758 1704 aa23.35■■□□□ 1.33
TFAP2A-212ENST00000478375 CARD11Q9BXL7 1154 aa23.34■■□□□ 1.33
TFAP2A-212ENST00000478375 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
TFAP2A-212ENST00000478375 SOCS7O14512 581 aa23.33■■□□□ 1.32
TFAP2A-212ENST00000478375 ZNF772Q68DY9 489 aaPredicted RBP23.33■■□□□ 1.32
TFAP2A-212ENST00000478375 SBNO1A3KN83 1393 aa23.32■■□□□ 1.32
TFAP2A-212ENST00000478375 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
TFAP2A-212ENST00000478375 HAP1P54257 671 aaPredicted RBP23.32■■□□□ 1.32
TFAP2A-212ENST00000478375 NGLY1Q96IV0 654 aa23.32■■□□□ 1.32
TFAP2A-212ENST00000478375 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
TFAP2A-212ENST00000478375 PPIP5K1Q6PFW1 1433 aa23.3■■□□□ 1.32
TFAP2A-212ENST00000478375 CABLES1Q8TDN4 633 aa23.3■■□□□ 1.32
TFAP2A-212ENST00000478375 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
TFAP2A-212ENST00000478375 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
TFAP2A-212ENST00000478375 EVC2Q86UK5 1308 aa23.28■■□□□ 1.32
TFAP2A-212ENST00000478375 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
TFAP2A-212ENST00000478375 ACEP12821 1306 aa23.27■■□□□ 1.32
TFAP2A-212ENST00000478375 USP21Q9UK80 565 aa23.23■■□□□ 1.31
TFAP2A-212ENST00000478375 CRYBG1Q9Y4K1 1723 aa23.23■■□□□ 1.31
TFAP2A-212ENST00000478375 PLCH1Q4KWH8 1693 aa23.23■■□□□ 1.31
TFAP2A-212ENST00000478375 POLR3AO14802 1390 aaPredicted RBP23.23■■□□□ 1.31
TFAP2A-212ENST00000478375 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
TFAP2A-212ENST00000478375 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms