RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
RC3H2-208ENST00000478216 XPCQ01831 940 aaPredicted RBP21.47■■□□□ 1.03
RC3H2-208ENST00000478216 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
RC3H2-208ENST00000478216 RPGRIP1LQ68CZ1 1315 aa21.45■■□□□ 1.02
RC3H2-208ENST00000478216 MYOM2P54296 1465 aa21.45■■□□□ 1.02
RC3H2-208ENST00000478216 NAIPQ13075 1403 aa21.44■■□□□ 1.02
RC3H2-208ENST00000478216 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
RC3H2-208ENST00000478216 NUTM2FA1L443 756 aa21.43■■□□□ 1.02
RC3H2-208ENST00000478216 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
RC3H2-208ENST00000478216 PPLO60437 1756 aa21.43■■□□□ 1.02
RC3H2-208ENST00000478216 FOXO3O43524 673 aa21.42■■□□□ 1.02
RC3H2-208ENST00000478216 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
RC3H2-208ENST00000478216 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
RC3H2-208ENST00000478216 PXDNQ92626 1479 aa21.41■■□□□ 1.02
RC3H2-208ENST00000478216 STK26Q9P289 416 aa21.41■■□□□ 1.02
RC3H2-208ENST00000478216 CCDC125Q86Z20 511 aa21.4■■□□□ 1.02
RC3H2-208ENST00000478216 BCL9LQ86UU0 1499 aa21.39■■□□□ 1.02
RC3H2-208ENST00000478216 GJD4Q96KN9 370 aaPredicted RBP21.39■■□□□ 1.01
RC3H2-208ENST00000478216 HAP1P54257 671 aaPredicted RBP21.38■■□□□ 1.01
RC3H2-208ENST00000478216 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
RC3H2-208ENST00000478216 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
RC3H2-208ENST00000478216 WAPLQ7Z5K2 1190 aa21.34■■□□□ 1.01
RC3H2-208ENST00000478216 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.33■■□□□ 1.01
RC3H2-208ENST00000478216 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
RC3H2-208ENST00000478216 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1.01
RC3H2-208ENST00000478216 RGL3Q3MIN7 710 aa21.33■■□□□ 1.01
RC3H2-208ENST00000478216 UNC5CLQ8IV45 518 aa21.33■■□□□ 1.01
RC3H2-208ENST00000478216 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
RC3H2-208ENST00000478216 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
RC3H2-208ENST00000478216 KIF1AQ12756 1690 aa21.31■■□□□ 1
RC3H2-208ENST00000478216 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
RC3H2-208ENST00000478216 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
RC3H2-208ENST00000478216 USP32Q8NFA0 1604 aa21.29■■□□□ 1
RC3H2-208ENST00000478216 GLI3P10071 1580 aa21.29■■□□□ 1
RC3H2-208ENST00000478216 FMN2Q9NZ56 1722 aa21.29■■□□□ 1
RC3H2-208ENST00000478216 TECPR2O15040 1411 aa21.29■■□□□ 1
RC3H2-208ENST00000478216 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
RC3H2-208ENST00000478216 PLEKHH1Q9ULM0 1364 aa21.28■■□□□ 1
RC3H2-208ENST00000478216 TMEM132EQ6IEE7 984 aa21.28■■□□□ 1
RC3H2-208ENST00000478216 KNDC1Q76NI1 1749 aa21.28■■□□□ 1
RC3H2-208ENST00000478216 SLIT2O94813 1529 aa21.28■■□□□ 1
RC3H2-208ENST00000478216 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
RC3H2-208ENST00000478216 A0A0G2JS52 829 aa21.27■■□□□ 1
RC3H2-208ENST00000478216 MYT1Q01538 1121 aa21.27■■□□□ 1
RC3H2-208ENST00000478216 LMOD2Q6P5Q4 547 aa21.27■■□□□ 1
RC3H2-208ENST00000478216 KRT28Q7Z3Y7 464 aa21.27■■□□□ 1
RC3H2-208ENST00000478216 DEFB132Q7Z7B7 95 aa21.25■□□□□ 0.99
RC3H2-208ENST00000478216 ABCC11Q96J66 1382 aa21.24■□□□□ 0.99
RC3H2-208ENST00000478216 TNS3Q68CZ2 1445 aa21.24■□□□□ 0.99
RC3H2-208ENST00000478216 PSME1Q06323 249 aa21.24■□□□□ 0.99
RC3H2-208ENST00000478216 SEPT12Q8IYM1 358 aa21.24■□□□□ 0.99
RC3H2-208ENST00000478216 IFT172Q9UG01 1749 aa21.24■□□□□ 0.99
RC3H2-208ENST00000478216 YTHDC2Q9H6S0 1430 aaKnown RBP21.23■□□□□ 0.99
RC3H2-208ENST00000478216 BRWD3Q6RI45 1802 aa21.23■□□□□ 0.99
RC3H2-208ENST00000478216 EP400Q96L91 3159 aa21.23■□□□□ 0.99
RC3H2-208ENST00000478216 CABLES1Q8TDN4 633 aa21.23■□□□□ 0.99
RC3H2-208ENST00000478216 PLCH1Q4KWH8 1693 aa21.22■□□□□ 0.99
RC3H2-208ENST00000478216 PHF8Q9UPP1 1060 aa21.22■□□□□ 0.99
RC3H2-208ENST00000478216 SRCAPQ6ZRS2 3230 aa21.22■□□□□ 0.99
RC3H2-208ENST00000478216 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
RC3H2-208ENST00000478216 SPATA31E1Q6ZUB1 1445 aa21.21■□□□□ 0.99
RC3H2-208ENST00000478216 VPS72Q15906 364 aa21.2■□□□□ 0.98
RC3H2-208ENST00000478216 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
RC3H2-208ENST00000478216 KRT27Q7Z3Y8 459 aa21.18■□□□□ 0.98
RC3H2-208ENST00000478216 NWD2Q9ULI1 1742 aa21.18■□□□□ 0.98
RC3H2-208ENST00000478216 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
RC3H2-208ENST00000478216 RGPD8O14715 1765 aaPredicted RBP21.17■□□□□ 0.98
RC3H2-208ENST00000478216 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
RC3H2-208ENST00000478216 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
RC3H2-208ENST00000478216 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
RC3H2-208ENST00000478216 NRXN1Q9ULB1 1477 aa21.14■□□□□ 0.98
RC3H2-208ENST00000478216 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
RC3H2-208ENST00000478216 BAG6P46379 1132 aa21.14■□□□□ 0.97
RC3H2-208ENST00000478216 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
RC3H2-208ENST00000478216 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
RC3H2-208ENST00000478216 POGKQ9P215 609 aa21.13■□□□□ 0.97
RC3H2-208ENST00000478216 LRP5O75197 1615 aa21.12■□□□□ 0.97
RC3H2-208ENST00000478216 PMFBP1Q8TBY8 1022 aa21.12■□□□□ 0.97
RC3H2-208ENST00000478216 FAM98CQ17RN3 349 aaKnown RBP21.11■□□□□ 0.97
RC3H2-208ENST00000478216 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
RC3H2-208ENST00000478216 CFAP70Q5T0N1 1121 aa21.1■□□□□ 0.97
RC3H2-208ENST00000478216 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
RC3H2-208ENST00000478216 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
RC3H2-208ENST00000478216 BTG4Q9NY30 223 aa21.08■□□□□ 0.97
RC3H2-208ENST00000478216 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
RC3H2-208ENST00000478216 ANKARQ7Z5J8 1434 aa21.07■□□□□ 0.96
RC3H2-208ENST00000478216 ONECUT3O60422 494 aaPredicted RBP21.07■□□□□ 0.96
RC3H2-208ENST00000478216 NRAPQ86VF7 1730 aa21.06■□□□□ 0.96
RC3H2-208ENST00000478216 COL14A1Q05707 1796 aaKnown RBP21.05■□□□□ 0.96
RC3H2-208ENST00000478216 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
RC3H2-208ENST00000478216 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
RC3H2-208ENST00000478216 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
RC3H2-208ENST00000478216 HRCP23327 699 aa21.03■□□□□ 0.96
RC3H2-208ENST00000478216 EN1Q05925 392 aaPredicted RBP21.03■□□□□ 0.96
RC3H2-208ENST00000478216 ADGRB2O60241 1585 aa21.02■□□□□ 0.96
RC3H2-208ENST00000478216 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
RC3H2-208ENST00000478216 FAM182BQ5T319 152 aa21.02■□□□□ 0.96
RC3H2-208ENST00000478216 DLC1Q96QB1 1528 aa21.02■□□□□ 0.96
RC3H2-208ENST00000478216 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.95
RC3H2-208ENST00000478216 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms