RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 C1orf167Q5SNV9 1468 aa33■■■□□ 2.87
TRAF4-211ENST00000478021 SOCS7O14512 581 aa32.99■■■□□ 2.87
TRAF4-211ENST00000478021 NHSL1Q5SYE7 1610 aa32.96■■■□□ 2.87
TRAF4-211ENST00000478021 NEUROD1Q13562 356 aa32.95■■■□□ 2.87
TRAF4-211ENST00000478021 DLC1Q96QB1 1528 aa32.94■■■□□ 2.86
TRAF4-211ENST00000478021 SAFB2Q14151 953 aaKnown RBP eCLIP32.94■■■□□ 2.86
TRAF4-211ENST00000478021 SIRT1Q96EB6 747 aa32.94■■■□□ 2.86
TRAF4-211ENST00000478021 DDX17Q92841 729 aaKnown RBP32.93■■■□□ 2.86
TRAF4-211ENST00000478021 PRAM1Q96QH2 718 aa32.93■■■□□ 2.86
TRAF4-211ENST00000478021 TRAK1Q9UPV9 953 aa32.93■■■□□ 2.86
TRAF4-211ENST00000478021 ORAI2Q96SN7 254 aa32.92■■■□□ 2.86
TRAF4-211ENST00000478021 NUTM2FA1L443 756 aa32.9■■■□□ 2.86
TRAF4-211ENST00000478021 JCADQ9P266 1359 aa32.9■■■□□ 2.86
TRAF4-211ENST00000478021 FMN2Q9NZ56 1722 aa32.9■■■□□ 2.86
TRAF4-211ENST00000478021 KIAA1210Q9ULL0 1709 aa32.89■■■□□ 2.86
TRAF4-211ENST00000478021 POGKQ9P215 609 aa32.89■■■□□ 2.86
TRAF4-211ENST00000478021 L3MBTL2Q969R5 705 aa32.88■■■□□ 2.85
TRAF4-211ENST00000478021 PHF23Q9BUL5 403 aaPredicted RBP32.85■■■□□ 2.85
TRAF4-211ENST00000478021 ARHGEF28Q8N1W1 1705 aaKnown RBP32.85■■■□□ 2.85
TRAF4-211ENST00000478021 SHPRHQ149N8 1683 aa32.85■■■□□ 2.85
TRAF4-211ENST00000478021 ESCO1Q5FWF5 840 aa32.83■■■□□ 2.85
TRAF4-211ENST00000478021 RGPD8O14715 1765 aaPredicted RBP32.81■■■□□ 2.84
TRAF4-211ENST00000478021 NBPF1Q3BBV0 1214 aa32.8■■■□□ 2.84
TRAF4-211ENST00000478021 ADGRB2O60241 1585 aa32.79■■■□□ 2.84
TRAF4-211ENST00000478021 MINK1Q8N4C8 1332 aaPredicted RBP32.77■■■□□ 2.84
TRAF4-211ENST00000478021 HIRIP3Q9BW71 556 aaPredicted RBP32.77■■■□□ 2.84
TRAF4-211ENST00000478021 LRP6O75581 1613 aa32.74■■■□□ 2.83
TRAF4-211ENST00000478021 LRRC59Q96AG4 307 aaKnown RBP32.74■■■□□ 2.83
TRAF4-211ENST00000478021 SPATA31A6Q5VVP1 1343 aa32.73■■■□□ 2.83
TRAF4-211ENST00000478021 TRPM1Q7Z4N2 1603 aa32.72■■■□□ 2.83
TRAF4-211ENST00000478021 SOS2Q07890 1332 aaPredicted RBP32.72■■■□□ 2.83
TRAF4-211ENST00000478021 USP32Q8NFA0 1604 aa32.71■■■□□ 2.83
TRAF4-211ENST00000478021 KIF1AQ12756 1690 aa32.71■■■□□ 2.83
TRAF4-211ENST00000478021 FOXO3O43524 673 aa32.7■■■□□ 2.83
TRAF4-211ENST00000478021 PCGF6Q9BYE7 350 aa32.7■■■□□ 2.83
TRAF4-211ENST00000478021 XPCQ01831 940 aaPredicted RBP32.69■■■□□ 2.82
TRAF4-211ENST00000478021 NPHP3Q7Z494 1330 aa32.69■■■□□ 2.82
TRAF4-211ENST00000478021 PNPLA6Q8IY17 1366 aa32.69■■■□□ 2.82
TRAF4-211ENST00000478021 NUTM2BA6NNL0 878 aaPredicted RBP32.68■■■□□ 2.82
TRAF4-211ENST00000478021 NUTM2EB1AL46 878 aaPredicted RBP32.68■■■□□ 2.82
TRAF4-211ENST00000478021 NUTM2AQ8IVF1 878 aaPredicted RBP32.68■■■□□ 2.82
TRAF4-211ENST00000478021 PXDNQ92626 1479 aa32.67■■■□□ 2.82
TRAF4-211ENST00000478021 RGS17Q9UGC6 210 aaPredicted RBP32.66■■■□□ 2.82
TRAF4-211ENST00000478021 TONSLQ96HA7 1378 aa32.66■■■□□ 2.82
TRAF4-211ENST00000478021 MEX3CQ5U5Q3 659 aaKnown RBP32.64■■■□□ 2.82
TRAF4-211ENST00000478021 ANKARQ7Z5J8 1434 aa32.64■■■□□ 2.82
TRAF4-211ENST00000478021 TULP4Q9NRJ4 1543 aa32.63■■■□□ 2.81
TRAF4-211ENST00000478021 WASLO00401 505 aaPredicted RBP32.63■■■□□ 2.81
TRAF4-211ENST00000478021 PHF8Q9UPP1 1060 aa32.63■■■□□ 2.81
TRAF4-211ENST00000478021 NBPF8Q3BBV2 869 aa32.61■■■□□ 2.81
TRAF4-211ENST00000478021 PRR36Q9H6K5 1346 aa32.6■■■□□ 2.81
TRAF4-211ENST00000478021 ROCK2O75116 1388 aaKnown RBP32.59■■■□□ 2.81
TRAF4-211ENST00000478021 EIF3AQ14152 1382 aaKnown RBP32.59■■■□□ 2.81
TRAF4-211ENST00000478021 PMFBP1Q8TBY8 1022 aa32.58■■■□□ 2.81
TRAF4-211ENST00000478021 QRICH2Q9H0J4 1663 aa32.58■■■□□ 2.81
TRAF4-211ENST00000478021 COL22A1Q8NFW1 1626 aaPredicted RBP32.55■■■□□ 2.8
TRAF4-211ENST00000478021 CENPJQ9HC77 1338 aaPredicted RBP32.55■■■□□ 2.8
TRAF4-211ENST00000478021 KRT28Q7Z3Y7 464 aa32.55■■■□□ 2.8
TRAF4-211ENST00000478021 ITSN1Q15811 1721 aa32.52■■■□□ 2.8
TRAF4-211ENST00000478021 POTEAQ6S8J7 498 aa32.52■■■□□ 2.8
TRAF4-211ENST00000478021 CDK19Q9BWU1 502 aa32.52■■■□□ 2.8
TRAF4-211ENST00000478021 ATP7BP35670 1465 aa32.52■■■□□ 2.8
TRAF4-211ENST00000478021 SPATA31A3Q5VYP0 1347 aa32.49■■■□□ 2.79
TRAF4-211ENST00000478021 ADAMTS2O95450 1211 aa32.48■■■□□ 2.79
TRAF4-211ENST00000478021 PSME1Q06323 249 aa32.48■■■□□ 2.79
TRAF4-211ENST00000478021 NUDT16Q96DE0 195 aaKnown RBP32.48■■■□□ 2.79
TRAF4-211ENST00000478021 C8orf37Q96NL8 207 aa32.46■■■□□ 2.79
TRAF4-211ENST00000478021 RALGAPBQ86X10 1494 aa32.46■■■□□ 2.79
TRAF4-211ENST00000478021 TOPAZ1Q8N9V7 1692 aa32.46■■■□□ 2.79
TRAF4-211ENST00000478021 GPRASP1Q5JY77 1395 aa32.45■■■□□ 2.79
TRAF4-211ENST00000478021 TNS3Q68CZ2 1445 aa32.45■■■□□ 2.79
TRAF4-211ENST00000478021 TRPM3Q9HCF6 1732 aaPredicted RBP32.43■■■□□ 2.78
TRAF4-211ENST00000478021 NGDNQ8NEJ9 315 aaKnown RBP32.42■■■□□ 2.78
TRAF4-211ENST00000478021 AFF2P51816 1311 aa32.42■■■□□ 2.78
TRAF4-211ENST00000478021 SBNO1A3KN83 1393 aa32.42■■■□□ 2.78
TRAF4-211ENST00000478021 SRPK2P78362 688 aaKnown RBP32.41■■■□□ 2.78
TRAF4-211ENST00000478021 LMOD2Q6P5Q4 547 aa32.41■■■□□ 2.78
TRAF4-211ENST00000478021 CARD11Q9BXL7 1154 aa32.41■■■□□ 2.78
TRAF4-211ENST00000478021 PLEKHG5O94827 1062 aa32.4■■■□□ 2.78
TRAF4-211ENST00000478021 ZNF772Q68DY9 489 aaPredicted RBP32.4■■■□□ 2.78
TRAF4-211ENST00000478021 CABP2Q9NPB3 220 aa32.39■■■□□ 2.78
TRAF4-211ENST00000478021 MARF1Q9Y4F3 1742 aaKnown RBP32.39■■■□□ 2.78
TRAF4-211ENST00000478021 NGLY1Q96IV0 654 aa32.36■■■□□ 2.77
TRAF4-211ENST00000478021 CCDC61Q9Y6R9 512 aa32.36■■■□□ 2.77
TRAF4-211ENST00000478021 ALS2Q96Q42 1657 aa32.35■■■□□ 2.77
TRAF4-211ENST00000478021 ABCA3Q99758 1704 aa32.34■■■□□ 2.77
TRAF4-211ENST00000478021 ARHGEF10O15013 1369 aa32.33■■■□□ 2.77
TRAF4-211ENST00000478021 CABLES1Q8TDN4 633 aa32.33■■■□□ 2.77
TRAF4-211ENST00000478021 PPIP5K1Q6PFW1 1433 aa32.32■■■□□ 2.76
TRAF4-211ENST00000478021 ACEP12821 1306 aa32.31■■■□□ 2.76
TRAF4-211ENST00000478021 EVC2Q86UK5 1308 aa32.31■■■□□ 2.76
TRAF4-211ENST00000478021 CLSPNQ9HAW4 1339 aa32.31■■■□□ 2.76
TRAF4-211ENST00000478021 PAK3O75914 559 aaPredicted RBP32.31■■■□□ 2.76
TRAF4-211ENST00000478021 PLEKHG3A1L390 1219 aa32.29■■■□□ 2.76
TRAF4-211ENST00000478021 HAP1P54257 671 aaPredicted RBP32.29■■■□□ 2.76
TRAF4-211ENST00000478021 POLR3AO14802 1390 aaPredicted RBP32.29■■■□□ 2.76
TRAF4-211ENST00000478021 CCER1Q8TC90 406 aaPredicted RBP32.28■■■□□ 2.76
TRAF4-211ENST00000478021 USP21Q9UK80 565 aa32.25■■■□□ 2.75
TRAF4-211ENST00000478021 QTRT2Q9H974 415 aaKnown RBP32.23■■■□□ 2.75
TRAF4-211ENST00000478021 FNBP4Q8N3X1 1017 aaPredicted RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 658.9 ms